Cavia porcellus (domestic guinea pig): 100731355
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Entry
100731355 CDS
T07777
Symbol
Nwd1
Name
(RefSeq) LOW QUALITY PROTEIN: NACHT domain- and WD repeat-containing protein 1
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cpoc04990
]
100731355 (Nwd1)
Domain-containing proteins not elsewhere classified [BR:
cpoc04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
100731355 (Nwd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
Beta-prop_EML
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_HPS5
AAA_16
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_NWD2_C
NACHT
Beta-prop_NUP159_NUP214
AAA_22
NPHP3_N
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_WDR75_1st
Beta-prop_WDR11_1st
Beta-prop_WDR75_2nd
AAA_18
Beta-prop_WDR35_TULP_N
Beta-prop_VPS8
WDR90_beta-prop_4th
DUF4062
Beta-prop_RIG_1st
AAA
nSTAND3
Motif
Other DBs
NCBI-GeneID:
100731355
NCBI-ProteinID:
XP_003464295
Ensembl:
ENSCPOG00000024668
LinkDB
All DBs
Position
Unknown
AA seq
1559 aa
AA seq
DB search
MDAEREALLGTACPELLTICQKHGLPFEAVDLRWGLRNSEAAEQLTVDLCLEELERCQRT
SLGPAFVALVGDQYGPCPVPRRIEEKEWEVLRAQLSTRPRDLELLIRCFRRDENSVPPSY
VLQAVGNEEATGPDEPTLTSALRTAAQEAQRLGLISQEQWQRYHHSGLQWELELGLLSGA
PGAMAFLREIPELDRHLLQDCALAVVDRLPDGCVDVAAQDVLSGLKQRMTQERPGALRVL
RLPWARDLVNPKNKAHACYLHELGEQFVKGASLQLLQRLRELPPNPPGPARLFEDIRHHL
WQGAQATRTFIGRQELLVRLGQRLRQDDGHSHGPLVLGGTPGVGKTTVLCKLAEQAAGLL
GRKTVTVLRLLGTSQGSSDARGLLAGLCLQLCLAFGLPTPPSQVLQAHARLAHFFHVLLH
TVSRRNFESLVILLDAVDDLDPGHPAQAIPWLPVVCPPRVHLILSACSGWHGALDAQXAA
LGDQDACWEVGPLPVDQGQKMVQRLLAEAGRTLSPAQHDMLWASLPECGHPGRLWLAFHE
AHSWASFSVPWPLAATAEEATHQLCARLELTHGQLLVAHVLGYLAASRHGLSEAELKDVL
SLDDEALLAAYRDWTPPSQEMLRFPPLLWVRLRQDLGHYLVQRPMHGTTLLAIAHRQLAE
VVQARYLSPAKAAARHHVLADFFSGAWSQGTKKHITLLCVGRPQSLDRKVAPQPLWFSDS
VANERKLAELPYHLLGAGRKEELLRDVLGDMSWLSCRVLSGGLDALLDDVDLCMPHVDGP
ELGLVRETLELCRPALELRGAEKSVLYTELLARLQASAPLYPVLVGPLCQQAQAWLHACP
FPLLVPLAGCLTPPGGPLYATLTGCHRGVTALAWSPEEQRLVVGAQDGMVTVWDVQKQRV
SYVLMGHTGEVMCVAVLARGTLAISASRDRSLCLWHLLSGRERWTQRDVGLPDSQPFSLC
VDEVHGVVYAAWGSQVSAWSLQTSELVFRILGDTANPCVCTAVLVSRARLLTLSKSGAVS
MWSSATGQLQGTWSLSTTPEETLTCVVPIQQQGRVIAGFRSGSLTVVSPDGVHRDRLLDR
LPEAPRFLVLAEDESLLAAGFGTRVRVFLADSEGFHRFPAADLEHEDVVETAVFGLQNNL
LVTGSQDGLVQVWSLSEQGVLLDVLESTGGPVNLLVHAGTLVASASRQSSSLRVWDLSNL
QQPRHPVAFLDRTGLAAVSHHGRYVYFPKVGDKSKITVWDVAEGEVQDVLDVSSEVRCLE
VAEGPKLLLAGLASGAMLGFPLDARQDVLCVPPPEAHKPVVGMALSKREDRLAIAYDNIV
LVLDVVPGDPCPAIEGPVCIFYTQLPETVTSVAVLDDCRVLYGMTSGNLFLYACTNSQVF
PLEAHGSPITCVDVSHSELLAVSGSQEGRLCLWDLRACECRLELDHVSSYCPGVRCACFS
KDDKYVFSGLEDRSVIVWSVLDGTLLASQFVHAVVTRIIPTSNGFIAPTSHGYILRQRFQ
CPASWASQQYPLRNFQKAVWRVKCRQRQELAAGALQDSSEGAQGRKPKPNKRSQVCLIV
NT seq
4680 nt
NT seq
+upstream
nt +downstream
nt
atggacgcggagagggaggccctactgggcaccgcctgcccagagctgctgaccatctgc
cagaagcatggccttcccttcgaggcagtagatctgcgttggggcctgcggaactcagag
gctgctgaacagctgaccgtcgacctctgcctagaggagctggagcgctgtcagaggacg
tccttgggcccagcctttgttgcactcgttggtgaccagtacggcccgtgccctgtgccc
cggcgcatcgaggagaaggagtgggaggtactgcgggcccagctgagcaccaggccccga
gacctggagctgctgatccgttgcttccggcgcgacgagaactcggtcccccccagctac
gtgctgcaggcagtgggcaatgaggaggccacggggcccgatgagcccaccctgacctca
gctctgcgcaccgcagcgcaggaggcccagaggctgggcctcatcagccaggagcagtgg
cagcgctaccaccactcagggctgcagtgggagctagagcttggcctgcttagcggtgcc
ccgggggctatggcatttctgcgagagatccctgagctcgacaggcacctactgcaggac
tgtgccctggctgtggtggaccggctgcccgatggctgcgtggatgtggccgcccaggac
gtgctgagcggcctcaagcagcgcatgacccaggagaggcctggggctctcagggtgctc
cgcctgccatgggctcgcgacctggtgaaccccaagaacaaggcccatgcatgctacctg
catgagctgggggagcagtttgtgaagggcgcctcgctccagctcctgcagcgcctgcgg
gagctgccacccaacccacctggccctgctaggctcttcgaggacatccgccaccacctg
tggcagggtgcccaggccactaggaccttcatcggccgccaggagctcttggtgcggctg
ggccagcggttgcggcaggatgatggccactcccatgggcccctggtgcttggcggcacc
ccaggtgttgggaagaccacagtgctctgtaagctggcggagcaggcagctgggctgctg
ggccgcaagacagtgacggtgctgcggctgttggggacctcgcagggcagctcagatgcc
cgtgggctcctggctggcctgtgcctacagctgtgcctggcctttgggctgcccactcca
cctagccaggtgctgcaggcccatgccaggctggctcacttcttccatgtcctgctccac
accgtgagccgcaggaacttcgagtcgttggtcatcctgctggatgctgtagatgacctg
gaccctggacaccccgcccaagccatcccctggctgcctgtcgtctgccctccacgggtg
cacctcatcctgtctgcctgctcagggtggcacggcgctctagacgctcagtgagccgct
cttggggaccaggatgcctgctgggaggtggggccactcccagtggaccagggccaaaag
atggtgcaacggctgctggctgaggctggacgcacgctgagcccagcccagcacgacatg
ctgtgggctagcttgccggagtgcggacacccagggcgcctgtggctggctttccacgag
gcccacagctgggcctccttctccgtgccttggcccttggctgccaccgctgaggaggcc
acacaccagctctgtgcccgcctggagctgacacatggccagttgctggtggcccatgtg
ctgggctacctcgcggcttcccggcatgggctatcggaggccgagctgaaggatgtgctg
tccctggatgacgaggcactgctggctgcctatcgagactggacgccacccagccaggag
atgctgcgcttcccgccgctgctgtgggtgcggctgcgccaggacctgggccactacttg
gtgcagcggcccatgcatggcaccacgctgctggccatcgcccacaggcagctggctgag
gtggtccaagcgcgctacttgtcccctgctaaggcggccgcacggcaccacgtcctggcc
gacttcttctccggcgcctggagccagggcaccaagaagcacatcactctgctgtgcgtg
ggaagaccgcagagcctggaccgcaaggtggcaccacagcccctgtggttctcagactcc
gtggccaatgagcggaagctggcagagctcccctaccacctgctgggggccggccgtaag
gaggagctgcttcgggacgtgctgggtgacatgagctggctgtcctgccgggtgctgtcc
ggtggtctcgatgccctgctggatgatgtggacctgtgcatgccccatgtggatggcccg
gaactgggcctggtgcgggagacactcgagctctgtcgcccagccctggagcttcggggt
gcagagaaaagcgtgctgtacaccgagctcctggcaaggctgcaggcctcagcacccttg
tacccagtgctggtggggccgctgtgccagcaggcccaagcctggctccatgcatgccca
ttcccactgttggtgccactggctggatgcctgaccccccctgggggccccctgtatgcc
acgctcactggctgtcacagaggtgtcaccgccctggcatggagcccagaggagcagagg
ctggtggtgggcgcccaggacggcatggtgactgtgtgggatgtgcagaagcaacgcgtg
agctatgtgctcatgggacacacaggcgaggtgatgtgcgtggccgtgcttgcccggggg
acactggccatctctgcctccagggaccgctcgctgtgcctgtggcacttgctgtctggc
cgtgagaggtggacccagcgggacgtggggctcccagactcccagcccttcagcctctgc
gtggatgaggtccacggcgtggtgtatgcagcctggggctcgcaggtcagcgcttggagt
ctgcaaacctcagagctggttttccgcatcctgggtgacactgccaacccctgcgtgtgc
acagctgtgctggtgtccagggccaggctgctgaccctgtccaagagtggtgctgtcagc
atgtggagctcggccactggacagcttcaggggacgtggtcgctgtccaccaccccagag
gagaccctgacctgtgtggtccccatccagcaacaagggagggtgatcgcggggttcaga
agtggctctctcaccgtggtctccccggatggagtgcacagagaccgcctgctggatcgg
ctcccggaggcaccgcggttcctggtgctggccgaagatgagtccctgctcgctgcaggc
tttgggacacgtgtgcgggtgttcctggctgactctgagggcttccaccgcttcccagcc
gctgacctggagcatgaggacgtggtggagacggcggtgtttggactccagaacaacctg
ttggtcaccgggtcccaggatgggctcgtgcaggtatggagtctgtcagagcaaggggtc
ctgctggatgtcctggagagtacaggcggccccgtgaatctgctggtccacgctgggacc
ctggtggcctctgcatcccgccagtcctcgtccctcagggtctgggacctcagcaacctg
cagcagccacggcatcctgtggccttcctggaccgcactggcctggccgccgtgtcacac
catggcagatatgtctacttcccaaaagttggggacaaaagcaagatcactgtgtgggat
gtggcagaaggtgaggtgcaggatgtcctggacgtgtccagtgaggtccggtgcctggag
gttgccgaggggcccaagctcctgctcgcggggctggcatcaggagccatgctgggcttc
ccgctagacgcgcggcaggatgtgttgtgtgtgcccccacctgaggcccacaagccagtg
gtgggcatggccctgagcaagcgtgaggaccggctggccatcgcctacgacaacatcgtg
ctggtgctggacgtggtgcctggggacccatgcccggccatcgagggccccgtgtgcatc
ttttacacgcagctgcctgagaccgtgaccagtgtggctgtgctagatgactgccgtgtg
ctctacggcatgaccagcggcaacctcttcctgtacgcatgtaccaactcccaggtcttc
cccctcgaggcccatggcagccccatcacctgcgtggatgtcagccatagtgagctgctg
gcagtcagcggatcacaggagggtcggctgtgtctctgggacctgagggcatgcgaatgc
aggctggagctggaccatgtgagctcctactgccccggggtgcgctgtgcctgcttctcc
aaggacgacaagtatgtgttctcgggcttggaggaccgctctgtcattgtgtggagcgta
ctggatggcacgctgctggccagccaatttgttcatgcagtagtgaccagaatcatcccc
acttccaatggcttcattgcccccacaagccatggttacatcctccggcagcggttccaa
tgcccagcctcctgggcctcacagcagtacccgctaaggaacttccagaaggcagtgtgg
agggtcaaatgcaggcagagacaagagctggcggcgggtgccctccaggactcgtcggaa
ggggcccagggaaggaagcccaagcccaacaagcgttcccaggtctgcctgattgtgtga
DBGET
integrated database retrieval system
