Cavia porcellus (domestic guinea pig): 100731367 Help Entry 100731367         CDS       T07777                                  Symbol Copa Name (RefSeq) coatomer subunit alpha   KO K05236   coatomer subunit alpha Organism cpoc  Cavia porcellus (domestic guinea pig) Brite KEGG Orthology (KO) [BR:cpoc00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:cpoc04131]     100731367 (Copa)   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:cpoc04147]     100731367 (Copa) Membrane trafficking [BR:cpoc04131]  Endoplasmic reticulum (ER) - Golgi transport   Retrieval pathways    Coat protein complex I (COP-I)     100731367 (Copa) Exosome [BR:cpoc04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    100731367 (Copa)   Exosomal proteins of bladder cancer cells    100731367 (Copa) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd WD40_CDC20-Fz Beta-prop_WDR3_2nd WDR55 Beta-prop_EML_2 TPR_COPA_B Beta-prop_WDR36-Utp21_1st WD40_Gbeta EIF3I Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR75_1st WD40_RFWD3 WD40_MABP1-WDR62_1st ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_WDR41 Beta-prop_SCAP Beta-prop_Aladin Beta-prop_SPT8 Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_RIG_2nd Motif Other DBs NCBI-GeneID:  100731367 NCBI-ProteinID:  XP_003466617 Ensembl:  ENSCPOG00000014917 UniProt:  A0A286XE72 LinkDB All DBs Position Unknown AA seq 1224 aa AA seqDB search MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSG SKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW VARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQK RTLASVKISKVKYVIWSADMSHVALLAKHAIVICNRKLDALCNIHENIRVKSGAWDESGV FIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFK LALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEI ALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMM KIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAESLKETFDP EKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGSIASKGKGGALAADIDIDTV GTEGWGEDAELQLDEDGFVEATEGLGDDVLGKGQEEGGGWDVEEDLELPPELDVPPGAAG GAEDGFFVPPTKGTSPTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVIQFGPYKQLFL QTYARGRTTYQALPCLPSMYAYPSRNWKDAGLKNGVPAIGLKLNDLIQRLQLCYQLTTVG KFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMEIERKKLPKETLDQ QKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQ TRKILSACEKNPTDACQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYSPEFKGQI CRVTTVTEIGKDVIGLRISPLQFR NT seq 3675 nt NT seq  +upstreamnt  +downstreamnt atgctaactaagttcgagaccaagagcgcgcgagtcaaagggctcagttttcaccccaaa cgaccctggatcttgaccagtttacacaatggggtcatccagctatgggactatcggatg tgcaccctcattgacaagtttgatgaacatgatgggccagtgcgaggcattgacttccat aagcagcaaccactattcgtctctggaggagatgactataagattaaggtttggaattac aagcttcgccgctgtcttttcaccttgcttggtcatttggattacattcgcactacgttt tttcatcatgaatatccttggattttgagtgcctcagacgatcagaccattcgagtgtgg aactggcagtctagaacctgtgtctgtgtgttaacagggcacaatcattatgtaatgtgt gctcagttccacccctctgaagacctggttgtatcagccagcttggaccagactgtgcga gtttgggatatttctggcctaaggaaaaaaaacttgtcccctggcgcagtggagtcggat gtgagaggaattaccggggttgatctttttggaactacagatgcggtggtgaagcatgtc ctagagggtcatgatcgtggtgtaaactgggctgccttccaccctactatgccccttatt gtatctggggcagatgaccgtcaagtaaagatctggcgcatgaatgagtcaaaggcatgg gaggttgacacttgtcgtggccattacaacaatgtatcttgtgctgtcttccaccctcgc caagagttgatcctcagcaattctgaagacaagagcattcgagtctgggatatgtctaag cggactggggttcagaccttccgcagggaccatgatcgtttctgggtcttggctgcccac cccaaccttaacctctttgcagcaggccatgatggtggcatgattgtgtttaaattggaa cgagaacggccagcctatgctgttcatggcaatatgctgcattatgtcaaggaccgattc ttacgtcagctggatttcaacagctccaaagatgtagctgtaatgcagttgcggagtggt tccaaatttccagtgttcaatatgtcatacaatccagcagaaaatgcagtcctgctatgt acaagagccagcaatttagagaatagtacctacgatctgtacaccatccccaaagatgct gactcccagaatcctgatgctcctgaagggaaacgatcctcaggcctgacagccgtttgg gttgctcgaaataggtttgctgttctagatcggatgcattcgcttctgatcaagaatctg aagaatgaaatcaccaaaaaagtccaggtgcccaactgtgatgagatcttctatgcaggc acaggcaacctcctgcttcgggatgcagattccatcacactctttgatgtgcagcagaag cggacactggcatctgtgaagatttccaaggtgaaatatgttatctggtccgcagacatg tctcacgtggcactactggccaaacatgccattgtgatctgtaaccgcaaactggatgct ctgtgtaacattcatgagaacattcgtgtcaagagtggggcctgggatgagagtggggta tttatctataccacgagcaaccacatcaaatatgctgtcaccactggggaccatgggatc atccgaactctggatttacccatctatgtcacacgagtgaagggcaacaatgtgtattgc ctagacagggaatgtcgtcctcgagtactcaccattgaccccactgagttcaaattcaag ctggccctgatcaacagaaaatacgatgaggtactgcacatggtgaggaatgccaaactg gtcggccagtccatcatcgcctacctccagaagaagggctacccagaagtggcgctgcat tttgtcaaggatgagaaaactcgcttcagtctggcactggagtgtggaaacattgagatt gctttggaagcagctaaagcactggatgacaagaactgctgggaaaaactgggagaagtg gccctgctacagggaaaccaccagattgtggaaatgtgctatcaacgcaccaaaaacttt gataaactttccttcctgtaccttatcactggcaacctggagaaacttcgcaagatgatg aagattgctgagatcagaaaggatatgagcggccattatcagaatgctttatacctgggt gatgtgtctgagcgagtgcggatcctaaagaactgtggacagaagtccttggcctatctc acagctgctactcatggcctagatgaagaagctgagagtctgaaggaaacatttgaccca gagaaggagacgatcccagacattgaccctaatgctaagctgctccagccacctgcacct atcatgccactggacaccaactggcccttgctaactgtgtctaaaggattctttgaaggc tccattgccagcaaaggaaagggaggagcactggctgctgacattgacattgacactgtt ggcactgagggctggggagaggatgcagaactgcagctggatgaagatggatttgtggag gctacagaaggtttgggggatgatgttcttggcaagggacaagaagaaggaggtggctgg gatgtggaagaagatctggagctcccccctgagctggatgtacctcctggggcagctggc ggggctgaagatgggttctttgtgcccccaaccaagggaacaagcccaactcaaatctgg tgcaataactctcagcttccagttgatcacatcctggcaggctctttcgaaacagccatg cggctgcttcatgaccaggtaggagtaatccagtttggcccctacaagcaactattccta cagacatatgcccgaggccgtactacctatcaggctttgccctgcctgccctccatgtat gcctaccccagccgcaattggaaggatgcagggctgaaaaatggtgtgccagctataggc ctaaagcttaatgacctcatccagaggttacagctgtgctaccagctcactacagttggc aagtttgaggaggctgtggaaaagttccgttccatcttactcagtgtgccacttctcgtt gtagacaataagcaggagattgctgaggcccagcagctcatcaccatttgccgggagtat attgtgggtttgtccatggagatagaaaggaagaagctgcccaaagagactctagaccag caaaagcgcatctgtgagatggcagcctacttcacccactccaacctccagcctgtgcac atgatcttagtgctgcggacagccctcaatctcttcttcaagcttaagaacttcaagact gctgccacctttgctcggcgcttgctggaacttggacctaagcctgaggtggctcaacag acccgaaaaatcctgtctgcctgtgagaagaaccccaccgatgcctgtcagctgaattat gacatgcacaatccttttgacatttgtgctgcatcttaccggcccatctaccgtggaaag ccagtggagaagtgtccactcagtggagcctgctattcccccgagttcaagggtcagatc tgcagggtcactacagtgacagagattggcaaagatgtgattggtctaaggatcagtcct cttcagtttcgctaa

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