Cavia porcellus (domestic guinea pig): 100731631
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Entry
100731631 CDS
T07777
Symbol
Ushbp1
Name
(RefSeq) Usher syndrome type-1C protein-binding protein 1 isoform X1
KO
K21881
Usher syndrome type-1C protein-binding protein 1
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cpoc03037
]
100731631 (Ushbp1)
Cilium and associated proteins [BR:
cpoc03037
]
Primary cilia and associated proteins
USH complex and associated proteins
100731631 (Ushbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USHBP1_PDZ-bd
DUF4407
PRTRC_E
Motif
Other DBs
NCBI-GeneID:
100731631
NCBI-ProteinID:
XP_013001967
LinkDB
All DBs
Position
Unknown
AA seq
692 aa
AA seq
DB search
MTKTGTEGKLCLQGRKLEESAQISTAMSARAMRPRSRRGRHTLPGELDPVAESSEEGEVA
GGSSGPGIVPTPGSSGLQWLGPVGELGSHDPGNRANKEAEEDGDRSPASAPEGPQLSTGD
AHQDLEEVALQDEGAVTPGHGESDVFQALQRALDSLEATAAAWRPRPLSGPGPREVAGGV
EGTPGPGQEAARLAEKNTWLQLALDTREDELAQVRAQSDALQREVQELQDSLQRLQSASP
SHHSSTGRDVYGDAGSSGANGVARGLQGPSSAHPLLRRLHSDPSVHSLRPPHLWPQGPDT
NTLEQQEERLRGSVEKLKGFNRLLLAALRGAKGRCEALSLQLSWRESQATALRLALQYSE
DHEEALGTLLGLREALTAAPGGGLQVVQEEARRLMAREEAPKPSSGGCSKVATTPQEVAA
QLHGYVQRLRERRALVKVPPEPGPTSAPKPTAAHAEAMVQAILEAQPGPALPRLKKTQIQ
QDLVTTRETLADLVLQLQLARREKRGLELREAALRAQAPALRLLLGQLRWEKAQLEAGDN
SGGDSSVGDSSEDEDAWPQGLAIGRDRGLGCRAWDQEQLTQDLASSLSRAQALQEQLRSL
RAQLEQVAQQGRAGRAQSAELSGDLCRTNSALVLGFRGAHRKQEEQRRKLEKQMTQMETR
QAEELARLEAMAGALRRPQLHSPPPPLGETLL
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaacaggcactgagggcaagctgtgtcttcagggcaggaagctggaggaatca
gcccagatttccacagcaatgagtgcccgggctatgcgaccccggagccggcgtgggagg
cacactctgccgggtgaactggaccccgtggccgagagttctgaggaaggcgaggtggct
ggagggagctcggggcccggcattgtgcccacacctgggagctctggactgcagtggctg
gggcctgtgggggagctgggtagccatgacccagggaacagggccaacaaagaggccgag
gaggacggggataggtcgccagcctctgccccagagggcccccagctgtccacaggggac
gcgcaccaggacctggaggaggtggccctacaagatgagggtgctgtcactcctgggcat
ggagagtctgatgtgttccaggccctgcagcgcgccctggactccctggaagccacagct
gctgcctggcgcccaaggcccctgagtgggcctgggcctagggaggtggcaggcggggtg
gaggggacaccagggcccgggcaggaggcagcccgcttggccgaaaagaatacctggctg
cagctggcactggacacccgggaggatgagctggcacaggtgcgggcccagagtgatgcg
ctgcaaagggaggtccaggagctgcaggattccctgcagaggctgcagtccgcctcacct
tcccaccacagcagcacgggtcgagatgtgtatggcgatgctggaagctctggggctaat
ggggtagcccgggggctgcagggcccttcttctgctcaccccctgctccggcgcctgcac
agcgatcccagcgtccactccctccggcctcctcacctgtggccccagggccctgacaca
aacaccctggagcagcaggaggagcggctccgggggagcgtggagaaactcaagggcttc
aaccgtctgctgctggctgcgctgcggggcgccaagggccgctgcgaggcgctgagcttg
cagctgagctggcgcgagtcccaggccaccgctctgcgcctggccctgcagtacagcgag
gaccacgaggaggccctgggcaccctgctcggcctgcgggaggcgctcactgcagccccc
gggggcggcctgcaggtggtgcaggaggaggcgcgaaggctgatggcccgggaggaggct
ccgaagcccagctccggaggctgcagcaaggttgctactactccacaggaagtggctgct
cagcttcatggctatgtgcaacgtctccgggagcgacgggccctggtgaaggttccacct
gagccgggtcccacctctgctcccaagccaaccgcagcccatgcagaagccatggtacag
gccattctggaggctcagcctggcccggccctgcccaggctgaagaagacacaaatccaa
caggacctggtgaccacacgggagacgcttgcagacctggtgctgcagctgcagctggcg
aggcgcgagaagaggggcctggagctgcgggaggcggccctgcgcgcccaggcgcctgcg
ctgagactgctgctgggccagctgcgctgggagaaggcgcagctcgaggccggggacaac
agcggcggggacagcagcgtgggcgacagcagcgaggatgaggatgcatggccccagggc
ctggccattggcagggacagaggcctgggatgcagagcgtgggaccaggagcagctgacc
caagacctggcatcatccctcagccgtgcccaggcccttcaggagcagctgcggtccctc
agggcacagcttgagcaggtggcccagcaaggccgagcaggccgggcccagagtgctgag
ctgagtggtgacctctgcagaactaacagtgccctggtactgggcttccggggagcccac
cggaaacaagaggagcagcgccggaagctggagaagcagatgacccagatggaaacccgg
caggctgaggagctggccaggttggaagccatggctggagcattgagaagaccccagctg
cactctccaccaccaccgctgggggagacccttctgtag
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