Cavia porcellus (domestic guinea pig): 100731875
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Entry
100731875 CDS
T07777
Symbol
Vps8
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100731875 (Vps8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpoc04131
]
100731875 (Vps8)
Membrane trafficking [BR:
cpoc04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
100731875 (Vps8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
TPR_VPS8_2
Beta-prop_WDR36-Utp21_1st
TPR_Vps41
zf_RING_Vps8
WD40_CDC20-Fz
Clathrin
Beta-prop_WDR5
UBA_HOIP
Beta-prop_HPS5
Beta-prop_WDR3_1st
WDR55
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
100731875
NCBI-ProteinID:
XP_023416040
Ensembl:
ENSCPOG00000010486
LinkDB
All DBs
Position
Unknown
AA seq
1456 aa
AA seq
DB search
MEDEPDHDNVEQNLCVKTTTEEELNKSFNLEASLSKFSYLDLDKELELRNDLIDDKEFDI
PQVDTPPTLESILNETDDEDESFVLEDPTLLNIDAIDSHSYDTSSVASSDSGDRTNLKRK
KKLPDSFSLHGSVMRHLLLKGISAQIVSAADKVDAGLPTAIAVSSLIAVGTSHGLALIFG
KDQNQALRLCLGSTSVGAQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITD
AHPPGTAILHIKFTDDPTLAICNDSGGSVFELTFKRVMGVRTCESRCLFSGSKGEVCCIE
PLHSKPELKDHPITQFSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFV
AVHNYVNPMLAFCRGDIVHFLLVKRDESGAIHVTKQKYLHLYYDLINFTWINSRTVVLLD
SVEKLHVIDRQTQEELETVEISEVQLVYNSSHFKSLATGGNVSQALALVGEKACYQSISS
CGGQIFYLGTKSVYVMMLRSWRERVDHLLKQDCLTEALALAWSFHEGKAKAVVGLSGDVS
KRKAVVADRMVEILFHYADRALRKCPEQGKIQVMEQHFQDTVPVIVDYCLLLQRKDLLFS
QMYDKLSENSVAKGVFLECLEPYILSDKLLGITPQVMKDLIVHFQDKKLMENVEALIVHM
DITSLDIQQIVLMCWENRLYDAMIYVYNRGMNEFISPMEKLFKVIAPPLNAGKTLTDEQV
VMGNKLLVYISCCLAGRAYPLGDIPEDLVPLVKNQVFEFLIRLHSAEASPEEEIYPYVRT
LLHFDTREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLA
RQLAKPDNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEESRLIRM
AEKAEFYQICEFMYEREHQYDKIIDCYLRDPLREEEVFNYIHNILSIPGHSAEEKQSVWH
KAMDHIEELVSLKPCKAAELVATHFSEQIETVIKKLQNEVLLFKFLRSLLDPREGIHISQ
ESLQISPSIMEQFIELLCKFSPNQVIETLQVLECYRLEETIQITQKYQLHEVTAYLLQKK
GDIPGAFLIMLERLQSKLQEITHQGENTKEDTSLKDVEDTMVETIALCQRNSHNLNQQQR
EALWFPLLEAMMAPQKLSGAAAPLLHSEALKSLTMQVLNSMAAFIALPSILQRILQDPVY
GKGKLGEIQGLILGMLDTFNYEQTLLETTTSLLNQDLHWSLCNLRASVTRGLNPKQDYCS
ICLQQYKRHQEMADEIIVFRKHYADVSCAGRLADLEVQGKQLSSQRTFWPQLFIQHLLYA
QCYPRGWEATRWTCYXCSSSNKVGKLSETXSEIKRGRITPSQVKMSPSYHQSKGDPAAKK
AASEPGLDPQQIQAFDQLCRLYRGSSRLALLTELSQNRGSDSYRPFSSSQSGPAFHSVFQ
NENFQLQLTPPPVTED
NT seq
4371 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgaaccagatcatgacaatgtggagcagaatctctgtgtcaagactactact
gaagaagagctgaataagtcttttaacctagaagcttcactttcaaaattctcttactta
gatctggacaaggaactggagttgagaaatgatttgattgatgacaaggagtttgatatt
cctcaagttgatactcctccgacactggaaagcatactaaatgaaactgacgatgaagat
gagtcttttgttctcgaggatcccacgttgttaaacattgatgccattgactcacactcc
tatgatacttcatctgtggcaagctcagatagtggtgacaggaccaacctaaaaaggaag
aagaaattacctgattctttttcactccatggctcagttatgcgacatttacttctgaag
ggaatttctgcccagatagtatctgcagctgacaaagttgatgctggcttgcctacagca
attgcggtctccagtctgatagcagtgggtacatctcatggattggctttaatatttgga
aaagatcagaatcaagcattgcgactctgcctggggagcactagtgttggggctcagtat
ggagccatctctgccctcagcatcaacaatgactgctcaagactgctctgtggctttgct
aaaggacagatcaccatgtgggatttggccagtggaaaacttctcagatcaataacagat
gctcatcctccaggaacagcgatattgcatatcaagtttacagatgatccaactcttgca
atttgcaatgacagcggaggctctgtttttgaattgacatttaagagagtgatgggagtg
agaacttgcgaatctagatgtctgttcagtggttccaagggagaagtttgctgtattgag
cctctgcattccaagcctgagctgaaagatcatcccatcacgcagttttcattattggcc
atggcatccttaacaaagatactggtcattggattgaaaccatccttgaaggtgtggatg
acttttccttatggacgtatggatccttccagtgttccactgctagcctggcactttgtg
gcagtacataattatgtgaaccccatgcttgctttctgcagaggagatattgttcatttt
ctactggttaagagagatgaatctggagcaatacatgttactaagcaaaagtatcttcac
ctgtactatgatctcatcaacttcacttggataaactcacgcacagtggtgctcttagat
agtgtggagaagttgcatgtgattgaccgccagacgcaagaggagttggaaacggtggag
atctcagaagttcagctggtttataacagcagccatttcaagtccctggccactgggggc
aacgttagccaggccctggctttggttggagagaaggcttgttaccagtccatcagtagc
tgtggtggtcagatcttttatctggggacaaaatcagtctatgtaatgatgctgagaagc
tggagagagagagtggatcatctcttgaaacaagattgcctcacggaagccttagccctt
gcgtggtctttccatgaaggaaaagcaaaagcagtagtgggattatcaggggacgtcagt
aagagaaaggcagttgttgcagatcggatggtagaaatcctgttccattatgcagatcgt
gctctgagaaagtgcccagaacaggggaaaatccaagtgatggagcagcattttcaggac
acggtgcctgtcatcgttgattactgccttctactgcagagaaaggatcttttatttagc
caaatgtatgataaattaagtgagaattcagtagccaaaggagtgtttttggagtgcctt
gaaccatatattttaagtgataaattgttggggatcacaccccaagtaatgaaagacttg
attgttcatttccaagataaaaagctgatggaaaatgtggaagccctcattgtccatatg
gatatcaccagcctagatattcagcagatagttctcatgtgttgggaaaatcgactgtat
gatgctatgatttatgtctacaacagaggcatgaatgaatttattagtccaatggagaaa
cttttcaaggtcattgctcctcctctgaatgcaggaaaaacgctcacagatgaacaggtt
gttatgggcaacaagcttcttgtatatattagctgttgtctggcaggccgtgcctatccc
cttggtgacatccctgaagatcttgttcccttggttaaaaaccaggtttttgaatttctg
attcgcctgcattcagcagaagcatccccagaggaagaaatctatccttatgttcggact
ctgctacattttgacacaagagaatttctaaatgtgttggccctgacgtttgaagatttt
aaaaatgataagcaagctgtggaataccaacagcgaattgtggatattttgttgaaagtt
atggtggagaattcagattttactccctcacaagtagggtgtctctttactttccttgct
cggcagcttgcaaagcctgacaacactttgtttgtgaaccgaacactctttgatcaggtg
cttgagttcctgtgtagccctgatgatgactcccgacactctgaaagacagcaggtcctt
ttagaattgctgcaggctggtggcatagttcagtttgaagaaagccggctcattcgtatg
gcagaaaaggccgagttctatcaaatttgtgaatttatgtatgaacgggaacaccagtat
gacaaaattattgattgctacttgcgtgacccactgagagaggaagaagtctttaattac
attcataacatcctgtccatccctggccacagtgccgaggagaagcagtccgtgtggcac
aaagcaatggatcacattgaggaacttgtatccctgaagccttgtaaagctgcagagctg
gttgctacacacttttctgaacagattgaaacagtcattaaaaaacttcagaatgaggta
ttgcttttcaaatttttgaggagtcttcttgacccaagggaaggtattcatataagtcaa
gaatcactgcaaatatctcccagtattatggagcagttcattgagctgttatgtaagttc
agtccaaaccaagttatagagacactgcaagtccttgagtgctaccgcctagaagaaacc
attcagatcactcaaaagtatcagctccatgaagtcactgcctatctactgcaaaagaaa
ggagacattcctggtgccttcttaataatgctggagagactgcaaagcaaacttcaagag
attacacatcaaggtgaaaataccaaagaggacacctcactgaaggatgttgaagatacc
atggtagagacgattgctctttgccagagaaattctcataatttgaaccagcagcagcga
gaggcactctggtttccattactggaggccatgatggcccctcagaagctgtccggggca
gcagcacctctcctgcactccgaagctctaaaatctttgactatgcaagttctcaacagc
atggcggcctttattgcccttccatcaatcttgcaaagaatcttacaggatccagtttat
ggaaaaggaaaacttggagaaatccagggccttattctgggaatgttagatacctttaac
tatgaacagaccctgctggaaacaaccaccagccttctaaaccaggatctccattggtca
ttatgtaacctaagagcttctgtcactagagggctgaatcccaaacaggattactgctct
atatgtttgcagcagtacaagagacaccaagaaatggctgatgaaatcattgtcttcagg
aagcactacgcggatgttagctgcgcaggaagattggcagacctggaggttcaggggaag
cagctctcctcacagaggaccttttggccgcagctgtttatccagcacctgctgtacgcc
cagtgctatccgagggggtgggaggcgacgagatggacatgctacnaatgcagctccagc
aacaaagtgggaaagctaagcgaaactntgtcggaaatcaaacgaggaaggataaccccg
tcccaggtaaaaatgtctccatcataccatcagtctaaaggagatcctgctgctaagaag
gcagcctcagaacctggcctggatccccagcaaatccaagcgttcgaccagctttgccgg
ctgtaccgaggaagctccaggctggcgctgctcacagagctctcccagaaccgtggcagt
gacagctaccggccgttcagcagctcccagagcggccctgctttccacagtgtcttccag
aatgagaacttccagctgcagctcacacccccacctgtgaccgaggactga
DBGET
integrated database retrieval system
