Cavia porcellus (domestic guinea pig): 100732205
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Entry
100732205 CDS
T07777
Symbol
Zcchc7
Name
(RefSeq) zinc finger CCHC domain-containing protein 7
KO
K12597
protein AIR1/2
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100732205 (Zcchc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpoc03019
]
100732205 (Zcchc7)
03016 Transfer RNA biogenesis [BR:
cpoc03016
]
100732205 (Zcchc7)
Messenger RNA biogenesis [BR:
cpoc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
100732205 (Zcchc7)
Transfer RNA biogenesis [BR:
cpoc03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
100732205 (Zcchc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCHC
AIR2-like_ZnK4
Motif
Other DBs
NCBI-GeneID:
100732205
NCBI-ProteinID:
XP_003470755
Ensembl:
ENSCPOG00000013472
UniProt:
H0VNT4
LinkDB
All DBs
Position
Unknown
AA seq
564 aa
AA seq
DB search
MFGGYETIEAYEDDLYREESSSELSVDSEVEFQLYSQVHYAQDLSNAIREEGLEEKNSGN
SELNTEVHQNLIVLSDSEVIQLSDESDVITLSDEDSIYRCKRKNIRVQTQKKTRGPPASP
YSDELADQKCKQEIEKPKPEERSGVTQEVMVIEVSSSEEEESITSESENVESWMLLGCEV
DEKDDDILLNLVGCESSVTEGEDDVHWFISDKDVEAQIGNNRSSGRWTRRYYSADKNVTC
RNCDKCGHLSKNCPLPQKVRACCLCSERGHLQYSCPARFCLDCSLPMSSTHRCLERSSWR
KRCDRCDMIGHYADACPEIWRQYHLTTKPGPPKKPKTPSGQSAFVYCYNCAQKGHYGHEC
TERRMFNQTFPTSPFIYYYDDKYEIRERDQRIKRKVKELKKNGDFPRQFKRSYMEAADKR
PHNDKRKSYASQENYRWHQGDKEAQREMMSRSRDPEKHRKVGRHWEANEDFPRGPDTHFP
SGFKSRKPHKSFHHSSHHHKPKEDIPRDGKRNRQKKKGRYVEDDSNDNLFLIKQRKKKIK
AVIQLLNSLHFCNILATFLLPIIE
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtggctatgagaccatagaagcatatgaagatgacctttatcgtgaggaatca
tctagtgaactgagtgttgatagtgaggtggaatttcaactctacagccaagttcattat
gcccaggatctcagtaatgctatcagggaggaaggtcttgaagaaaagaactctgggaat
tctgagttgaatactgaagtacatcagaacttaattgtcctttcagatagtgaagtcata
cagctatcagatgaatcagatgtcatcactttgtctgatgaagatagtatttatagatgt
aaaagaaagaacattagagtccaaacacagaaaaagaccagaggtcctcctgcttctcct
tattctgatgagttggccgatcagaaatgcaaacaggaaattgagaagcctaaacctgaa
gaaagatcaggtgtgacccaagaagtcatggttatagaggtcagttcaagtgaagaggaa
gaaagcatcacttctgaaagtgaaaacgtggaaagctggatgctactggggtgtgaagta
gatgagaaagatgatgatatccttctcaaccttgtgggatgtgaaagctctgttactgaa
ggagaagatgatgtacactggttcatcagtgacaaagatgtggaggcccagataggtaat
aacagatcatctggaagatggacccgtcgatactattcagctgacaaaaacgttacctgt
aggaattgtgataaatgtggtcatctatcaaaaaattgccccttaccacaaaaagtccgt
gcctgctgcctctgctctgagagaggacacctccagtattcctgtccggcccgcttttgc
ttagactgttctttgccaatgtcttccactcacagatgtcttgaaagatcttcctggaga
aaacgatgtgaccgatgtgatatgataggccactatgctgatgcttgcccagaaatctgg
aggcagtatcacctaacgaccaaacctggaccacccaaaaagccgaagactccttctgga
caatcagcctttgtgtattgctacaactgtgcacaaaaaggccattatggacatgaatgt
acagaaaggcgaatgtttaaccagacatttccaacatctccattcatctactactatgat
gacaaatacgaaattcgggagagggatcagagaataaaacgaaaagtaaaagaactcaag
aaaaatggggattttccaaggcagttcaaaagatcatatatggaagcagcagataagaga
ccccacaatgacaagaggaagagctatgcctcccaggaaaactacaggtggcatcaagga
gataaagaagctcagagagaaatgatgagcaggagtagggacccagagaagcacaggaag
gttggcaggcattgggaagcgaatgaggactttcctagaggcccagacactcattttccc
agcggttttaaatcccggaagcctcacaagtcctttcatcactcatcacatcaccataag
ccaaaagaagacattcccagggatggcaagcggaacaggcagaagaaaaagggaagatat
gtggaagatgacagcaatgataacttatttcttatcaagcaaaggaaaaaaaaaatcaaa
gctgtgatacagcttctgaattcacttcatttctgtaacattctagcaacatttttatta
cctataattgaataa
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