Cavia porcellus (domestic guinea pig): 100732394
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Entry
100732394 CDS
T07777
Name
(RefSeq) LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A1-like
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03040
Spliceosome
cpoc05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100732394
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100732394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpoc03019
]
100732394
03041 Spliceosome [BR:
cpoc03041
]
100732394
Messenger RNA biogenesis [BR:
cpoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
100732394
mRNA cycle factors
Common to processing body (P body) and stress granule
100732394
Spliceosome [BR:
cpoc03041
]
Common components
Common spliceosomal components
hnRNP proteins
100732394
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
HnRNPA1_LC
Motif
Other DBs
NCBI-GeneID:
100732394
NCBI-ProteinID:
XP_023421657
LinkDB
All DBs
Position
Unknown
AA seq
320 aa
AA seq
DB search
MSKSASPKSASPKSESPKEPEQLCKLFIRGLGLSTTKESLRRHFEQWGTLTDCVVIRDPN
TKRSRGFGFVTYASVEEVEAAMKARPHQVDGRVVLTKRAVSREDSQRPGAYLXXXXXXXX
XXXXXXXXXXXXXHFEQYGEIEVIEIMTDRNTGKKRGFAFVTFVDYDSADKAVIHRYQTI
NGYRCEVNKALSRQKMANASSSPRGPHDAGNFGGGRRGGFGGSVSCGRGGNRSVPGSFDG
TGIHYTEIGNGRHFQVGGSYTGFVSYHSQPSHYELMKRGASGGRSSAPCVGRGQYFTKPR
NQGGNGSSSNNKSVSRGRRC
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagtcagcatctcctaagtcagcgtctcctaagtcagagtctcccaaggagcca
gagcagctgtgcaagctcttcatcagagggctgggcctcagcaccaccaaggagagtctt
agaaggcactttgagcagtggggaacactcaccgactgtgtggtgataagagatccaaac
accaagcgctccaggggctttgggttcgtcacttatgccagcgtggaggaggtggaggca
gccatgaaggccaggccacaccaggtagatggcagagtggtgctaaccaagagagctgta
tccagggaagactcccaaagaccgggtgcctacctnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncattttgaacaatatggagaa
atcgaagtcattgagatcatgactgaccgaaacactggaaagaaaaggggcttcgctttt
gtaacctttgttgactatgattctgcagacaaggctgtgattcacagataccagactatc
aacggctacaggtgtgaggtgaacaaagccctgtccaggcagaagatggctaatgcttca
tctagcccaagaggtccacatgatgctggaaattttggtggtggtcgtcgaggtggtttt
ggtggctctgtcagttgtggtcgaggaggaaaccgcagtgttccaggttcctttgatggc
acagggattcactacactgaaattggtaatggaagacattttcaagtgggcggaagctac
actggttttgtcagttaccacagccaaccttcacactatgagctcatgaagagaggagca
tctggaggcagaagctccgcaccctgtgttggcagaggccaatattttaccaaaccacga
aatcaaggtggcaatggtagctccagcaataacaagagcgttagcagaggcagaaggtgt
taa
DBGET
integrated database retrieval system
