Cavia porcellus (domestic guinea pig): 100732574
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Entry
100732574 CDS
T07777
Name
(RefSeq) general transcription factor IIH subunit 2 isoform X1
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03022
Basal transcription factors
cpoc03420
Nucleotide excision repair
cpoc05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100732574
09124 Replication and repair
03420 Nucleotide excision repair
100732574
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
100732574
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpoc03021
]
100732574
03400 DNA repair and recombination proteins [BR:
cpoc03400
]
100732574
Transcription machinery [BR:
cpoc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
100732574
DNA repair and recombination proteins [BR:
cpoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
100732574
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
HscB_4_cys
ORC3_N
Motif
Other DBs
NCBI-GeneID:
100732574
NCBI-ProteinID:
XP_003470305
Ensembl:
ENSCPOG00000033206
UniProt:
A0A286XJ67
LinkDB
All DBs
Position
Unknown
AA seq
395 aa
AA seq
DB search
MDEEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRVFEHHGQVRLGMMRH
LYVVIDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTEL
SGNPRKHITSLKKAIDMTCHGEPSLYNSLSMAMQTLKHMPGHTSREVLIIFSSLTTCDPS
NIYDLIKTLKAAKIRVSVIGLSAEVRVCTALARETGGTYHVILDESHYKELLTHHVSPPP
ASSSSECSLIRMGFPQHTIAALSDQDAKPSFSMAHLDSSSEPGLTLGGYFCPQCRAKYCE
LPVECKICGLTLVSAPHLARSYHHLFPLDAFQEIPLEEYKGERFCYGCQGQLKDQHVYVC
TVCQNVFCVDCDVFVHDSLHCCPGCIHKIPIPSGI
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaaccagaaagaactaagcgatgggaaggaggctatgagagaacttgggaa
attcttaaagaagatgaatctggctcacttaaagctacaatagaagacattcttttcaag
gcaaagagaaaaagagtatttgaacaccatggacaagttcgacttggaatgatgcgccac
ctttatgtggtgatagatggatcgcggacaatggaggaccaagatttaaagcctaataga
ctgacatgtacattaaagttgttggagtactttgtagaagagtattttgatcaaaatcct
atcagtcagattggaataattgtaactaagagtaaaagagctgaaaaactgactgaactc
tcaggaaacccaaggaaacacataacatctttgaagaaagctattgatatgacctgtcat
ggagaaccatctctttataattccttaagcatggccatgcagactctaaaacacatgcct
ggacacacaagcagagaagtcctcatcatctttagcagtcttacaacttgtgatccatcg
aatatatatgatctgattaagaccctgaaagcagctaaaatcagagtgtccgtcattggg
ctgtcggcagaggttcgggtttgcactgcacttgctcgggaaactggaggcacgtaccat
gtgattttagatgaaagccactacaaagaattgctaacgcatcatgttagtcctcctcct
gctagctcaagttctgaatgctcacttattcgtatgggatttcctcagcataccattgct
gctttgtctgatcaagatgcaaaaccttctttcagcatggcgcacctggatagcagttct
gaaccaggacttacattaggaggctatttctgcccacagtgtcgggcaaagtactgtgag
cttcctgttgaatgtaaaatatgtggtcttactttggtctcagctccccacttggcgcgg
tcgtatcatcatttatttcccttggatgcttttcaagaaattcccctagaagaatataaa
ggggaaagattttgttatggatgtcaggggcaactgaaggaccaacatgtctatgtttgc
actgtgtgccagaatgtattttgtgtggactgtgatgtttttgttcatgactctctccac
tgttgtcctggctgcattcataagattccaattccttcaggtatttga
DBGET
integrated database retrieval system
