Cavia porcellus (domestic guinea pig): 100732580
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Entry
100732580 CDS
T07777
Symbol
Ctcf
Name
(RefSeq) LOW QUALITY PROTEIN: transcriptional repressor CTCF
KO
K23195
transcriptional repressor CTCF
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpoc03000
]
100732580 (Ctcf)
03036 Chromosome and associated proteins [BR:
cpoc03036
]
100732580 (Ctcf)
Transcription factors [BR:
cpoc03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
100732580 (Ctcf)
Chromosome and associated proteins [BR:
cpoc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100732580 (Ctcf)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
Zf-C2H2_ZNF451_C
zf-C2H2_ZN142
zf-C2H2_7th_ZNF462
zf-met
zf-C2HE
zf-C2H2_6
Zf-C2H2_ZNF451
zf-C2H2_15
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
100732580
NCBI-ProteinID:
XP_023421755
Ensembl:
ENSCPOG00000010698
LinkDB
All DBs
Position
Unknown
AA seq
727 aa
AA seq
DB search
MEGEAVEAIVEESETFIKGKERKTYQRRREGGQEEDACHLPQNQTDGGEVVQDVNSSVQM
VMMEQLDPTLLQMKTEVMEGSVAPEAEAAVDDTQIITLQVVNMEEQPINIGELQLVQVPV
PVTVPVATTSVEELQGAYENEVSKEGLAESEPMICHTLPLPEGFQVVKXGANGEVETLEQ
GALPPQKILAGKKDPDYQPPAKKTKXTKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLSEV
NAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCG
RAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYAS
VEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSG
TMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERY
ALIQHQKSHKNEKRFKCDQCDYACRQERHMIMHKRTHTGEKPYACSHCDKTFRQKQLLDM
HFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENGGETKKSKRGRKR
KMRSKKEDSSDSENAEPDLDDNEDEEEPAVEIEPEPEPQPVTPAPPPAKKRRGRPPGRTN
QPKQNQPTAIIQVEDQNTGAIENIIVEVKKEPDAEPVEGEEEEAQPATTDAPNGDLTPEM
ILSMMDR
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgaggctgtcgaagccattgtggaagagtctgaaactttcattaaaggaaaa
gagagaaaaacttaccagcgacgccgggaaggaggtcaggaagaagatgcttgccacctg
ccccagaaccagacagatgggggtgaggtggtccaggatgtcaacagcagtgtacagatg
gtaatgatggaacagctggatcctactcttcttcagatgaagactgaagtaatggagggc
tcagtggctccagaagcagaggctgctgtggatgatacacagataataactttgcaggtt
gtaaatatggaagaacagcctattaacataggagagcttcagcttgttcaagtacctgtt
cctgtaactgtacctgttgctaccacttcagtagaagaacttcagggggcttatgaaaat
gaagtgtctaaagagggccttgccgaaagcgaacccatgatatgtcacaccttacctttg
cctgaagggtttcaggtggtgaagntgggggccaatggagaagtggagacactagagcaa
ggggcacttccacctcagaagatcctagctggcaaaaaagacccagactatcagccacca
gccaaaaaaacaaagnaaaccaaaaagagcaaactgcgttatacagaggagggcaaagat
gtggatgtgtctgtctatgactttgaagaagaacagcaggaaggtctgttgtcagaagtt
aacgcagaaaaggtagttggtaatatgaagcctccaaagccaacaaaaattaaaaagaaa
ggtgtgaagaagacattccagtgtgagctttgcagttacacgtgtccacggcgttcaaat
ttggatcgtcacatgaaaagccacactgatgagagaccacacaagtgccatctctgtggc
agggcgttcagaacagtcaccctcctgaggaatcaccttaatacacatacaggtactcgt
cctcacaagtgcccagactgtgacatggcctttgtgaccagtggagaattggtgcggcat
cgtcgttacaaacacacccacgagaagccatttaaatgttccatgtgtgattatgccagt
gtagaagtcagcaaattaaaacgtcacattcgctctcatactggtgagcgcccgttccag
tgcagtttgtgcagttatgccagcagagacacatacaagctcaaaaggcacatgagaact
cattcaggggaaaaaccttatgaatgttatatttgtcatgctcggtttacccagagtggt
accatgaagatgcacattttacagaagcacacagaaaatgtggctaagtttcattgtcct
cactgtgacactgtcatagcccgaaaaagtgatctgggtgtccacttgcgaaagcagcat
tcctatattgaacaaggcaagaaatgtcgttattgcgatgctgtgtttcatgagcgctat
gccctcatccagcatcagaaatcacacaagaatgagaaacgctttaagtgtgaccagtgt
gattatgcttgtagacaggagaggcatatgatcatgcataagcgcacccacactggggag
aagccttacgcctgcagccactgcgacaaaaccttccgccaaaaacagctcctcgacatg
cacttcaagcgctatcatgaccccaactttgtccctgcggcctttgtctgttctaagtgt
gggaagacatttacacgtcggaataccatggcaagacatgctgataattgtgctggtcca
gatggtgtagaaggagaaaatggaggagaaacgaagaagagtaaacgtggaagaaaaaga
aagatgcgctctaaaaaagaagattcctctgatagtgaaaatgctgagccagatctggat
gacaatgaggatgaggaggagcctgcagtagaaattgaacctgaaccagagccccagcct
gtgaccccagccccaccacctgccaaaaagcggagaggacgaccgcctggcagaaccaat
cagcccaaacaaaaccagccaacagccatcattcaggttgaagaccagaatacaggtgca
attgagaacattatagttgaagtcaaaaaagagccagacgctgagcctgtggagggagag
gaagaggaggctcagccagccaccacagatgcccccaatggggacctcacacctgaaatg
atcctcagcatgatggaccggtga
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integrated database retrieval system
