Cavia porcellus (domestic guinea pig): 100732657
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Entry
100732657 CDS
T07777
Symbol
Cdkal1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpoc03016
]
100732657 (Cdkal1)
Enzymes [BR:
cpoc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
100732657 (Cdkal1)
Transfer RNA biogenesis [BR:
cpoc03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
100732657 (Cdkal1)
Prokaryotic type
Methylthiotransferases
100732657 (Cdkal1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
Motif
Other DBs
NCBI-GeneID:
100732657
NCBI-ProteinID:
XP_023420463
Ensembl:
ENSCPOG00000034489
LinkDB
All DBs
Position
Unknown
AA seq
610 aa
AA seq
DB search
MPSASCDMLLDDIEDIVSQEDSKPQDRHFARKHVVPKVRRRNTQTYLQEESSPPSDSTIP
GIQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITENSSEADLWLLNSCTVKNPAEDHFRN
SINFFLQIFGLVPAGNRHSQWYAQAPGISGPAEPVQPRLLGAVVVVIVIVTITVTVTVII
VIVVVSAVQQIDRVVEVVEETIKGHSVRLLGQKKDNGKRLGGARLDLPKIRKNPLIEIIS
INTGCLNACTYCKTKHARGNLASYPIDELVDRAKQSFQEGVCEIWLTSEDTGAYGRDIGT
SLPTLLWKLVEVIPEGAMLRLGMTNPPYILEHLEEMAKILNHPRVYAFLHIPVQSASDSV
LMDMKREYCVADFKRVVDFLKEKVPGITIATDIICGFPGETDQDFQETVKLVEEYKFPSL
FINQFYPRPGTPAAKMEQVPAQVKKQRTKDLSQIFHSYNPYDHKIGEKQQVLVTEESFDS
KFYVAHNRFYEQVLVPKNPSFMGKMVEVDIYESGKHFMKGQPVSDAKVYTPSISKPLAKG
EVSGLTKEFRNMLGIHPNLMSSSPAAPRHDSASSQVGLQMQRLLQDCALRAAVGLALVAL
LFAFFAKVYN
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgcttcctgcgatatgctactggatgacatagaagatattgtatcacaggaa
gattcaaagccacaggatagacattttgcaagaaagcatgttgttccaaaggtgcgaaga
agaaatacccaaacatatttgcaagaggaaagcagtccaccaagtgatagcactattcca
ggcatacagaaaatttggatacgaacatggggttgttcacataataattcagatggagaa
tatatggctggacagctggctgcttatggctataaaattacagaaaattcttccgaagca
gatttatggcttctgaacagttgtactgtaaaaaacccagccgaagatcactttagaaac
tcaattaacttctttctccagatctttggattagttcctgcaggaaataggcattcacag
tggtacgctcaggccccgggcatctctgggccagcagagccggtgcagccacggctgctg
ggagcagtggttgtcgttatcgttattgtcaccatcactgtcactgtaactgtcatcatc
gtcatcgtcgtcgtttcagcagttcaacagatagatcgtgtggtagaagttgtggaggaa
acaattaaaggtcactctgtgagactgctgggtcagaagaaggacaacgggaagcggctg
gggggagcgcgactggatttgccgaagattaggaagaatccactgattgaaatcatttcc
atcaatactgggtgtctcaatgcttgtacctactgcaaaactaaacatgccagaggaaat
ttggccagttatcctattgatgaactagtggatagagccaaacaatcttttcaagagggt
gtttgtgagatatggttgaccagtgaagacacaggggcctatggcagagatattggcacg
agtctccccacgctcctgtggaaactggtagaagtgattcccgagggagcaatgctgagg
cttggcatgacaaatccaccctatatcttagagcatctggaggaaatggcgaaaatcctc
aatcatcctcgggtctacgctttcctgcacatccccgtccagtctgcctctgacagtgtg
ctcatggacatgaaaagagaatactgcgtggctgacttcaaaagagtagtggattttctg
aaagagaaagttcctggaataaccattgctacagatattatctgtggttttcctggagaa
acagatcaggattttcaagaaacagtgaaacttgttgaagagtacaaatttccaagcctc
ttcattaaccagttttacccaagaccaggaactcctgctgcaaaaatggaacaagttcca
gcccaagtgaaaaagcaaaggacaaaagatctgtctcagatatttcattcttacaatcca
tatgatcacaagattggtgaaaaacaacaagtgttagtaacagaagaatcttttgattcc
aagttttatgttgcacacaatcgattttatgagcaggttttagtgccaaagaacccttcc
ttcatggggaaaatggtcgaagtggacatttatgaatcaggaaaacattttatgaaaggg
cagccagtatcggatgccaaagtgtacacaccgtccatcagcaaaccgttagcaaaggga
gaagtctcaggtttaacaaaggaattcagaaatatgcttgggattcacccaaatctgatg
tccagttcccccgctgcacctcggcacgactcagcgagttcccaggtcggactgcagatg
caaaggttgcttcaagactgtgcgttgagggcggctgtgggcctggccctggttgctctt
ctctttgccttttttgccaaggtctataattag
DBGET
integrated database retrieval system
