Cavia porcellus (domestic guinea pig): 100732951
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Entry
100732951 CDS
T07777
Name
(RefSeq) LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A1-like
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03040
Spliceosome
cpoc05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100732951
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100732951
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpoc03019
]
100732951
03041 Spliceosome [BR:
cpoc03041
]
100732951
Messenger RNA biogenesis [BR:
cpoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
100732951
mRNA cycle factors
Common to processing body (P body) and stress granule
100732951
Spliceosome [BR:
cpoc03041
]
Common components
Common spliceosomal components
hnRNP proteins
100732951
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
HnRNPA1_LC
RRM_7
RBD_DEAH11
Motif
Other DBs
NCBI-GeneID:
100732951
NCBI-ProteinID:
XP_013010034
LinkDB
All DBs
Position
Unknown
AA seq
442 aa
AA seq
DB search
MALAWATSQTLFLLKSLRQQLENPSVQQLTHGVNLSEKDPSNWLSELWVGGPTLGCNAQA
AIKGKLRRKEGSVCSRTAAVPSLSLESLPGFQHSPFLSWYRLPPGFHWGLHLHLQSQTDL
CCSTPALQAALAAFLSKSASPKETEEQRCKLFIRGLSHHXSLRSHFEQWGTLTDCMVMRN
PNTKRSRGFGFVTYASVEEVEAAMKARPHQVDGRVVLTKRAVSREDSQRPGAYLTVKIFV
GGIKDTDEHHLRDHFEQYREIEVIEIMTDRNTGKKRGFAFVTFVDYDSADKAVIHRYQTV
XGYRCEVNKALSRQKMANASSSQRGPHGAGNFGGGRRGGFGGYGNCGRGGNFNVPRGFGG
TGNQYTEIGNGSNFQVGGSYIDFGNYHNQCLHYGPMKGGKSGGRSSGLYGGGDQYFAKPR
NQGGNRGSSSNGSYGRGRGRSF
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggccctagcctgggccacatcccagactcttttccttcttaaaagtttgagacagcag
cttgaaaatccaagtgtgcaacagctgactcatggggtcaacttgagtgagaaagaccca
agcaattggctcagcgagctgtgggtgggaggacccaccctagggtgcaatgcccaggct
gctataaaagggaaactaagaaggaaggaaggcagtgtctgctccaggacagctgcagtc
ccctccctctccttggagtccctgcctggcttccagcacagccccttcctctcctggtac
cgactccctccaggattccactggggcctccacctccacctccagtcccagacggacctg
tgctgctccacaccagcgctgcaggcggccctggctgccttcttgtccaagtcggcatct
cccaaggagactgaagagcagcgctgcaagctcttcatcagagggctgagccaccacnct
agtctcaggagccactttgagcagtggggaacactcaccgactgtatggtaatgagaaat
ccgaacaccaagcgctccaggggctttgggttcgtcacttatgccagcgtggaggaggtg
gaggcagccatgaaggccaggccacaccaggtagatggcagagtggtgctaaccaagaga
gctgtatccagggaagactcccaaagaccgggtgcctacctcactgtgaagatctttgtc
ggtggcattaaagatactgatgaacatcacctacgagatcattttgaacaatatagagaa
atcgaagttattgaaatcatgactgaccgaaacactggaaagaaaaggggcttcgctttt
gtaacctttgttgactatgattctgcagacaaggctgtgattcacagataccagactgtc
naaggctacaggtgtgaggtgaataaagccctgtccaggcagaagatggctaatgcttca
tctagccaaagaggtccacatggtgctggaaattttggtggtggtcgtcgaggtggtttt
ggtggctatggcaattgtggtcgaggaggaaacttcaatgttccacgtggctttggtggc
actgggaatcagtacactgaaattggtaatggaagcaattttcaagtgggcggaagctac
attgattttggcaattaccataatcagtgtttacattatgggcccatgaaaggaggaaag
tctggaggcagaagctctgggctatatgggggtggagaccaatactttgccaagccacga
aatcaaggtggcaaccgtggctccagcagtaatggaagctatggcagaggcagaggcaga
agcttttaa
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integrated database retrieval system
