Cavia porcellus (domestic guinea pig): 100733021
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Entry
100733021 CDS
T07777
Symbol
Top3a
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03440
Homologous recombination
cpoc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100733021 (Top3a)
03460 Fanconi anemia pathway
100733021 (Top3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpoc03032
]
100733021 (Top3a)
03400 DNA repair and recombination proteins [BR:
cpoc03400
]
100733021 (Top3a)
Enzymes [BR:
cpoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
100733021 (Top3a)
DNA replication proteins [BR:
cpoc03032
]
Eukaryotic type
DNA Topoisomerases
100733021 (Top3a)
DNA repair and recombination proteins [BR:
cpoc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
100733021 (Top3a)
FA (Fanconi anemia) pathway
100733021 (Top3a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
ADAMTS_CR_3
Motif
Other DBs
NCBI-GeneID:
100733021
NCBI-ProteinID:
XP_003465949
Ensembl:
ENSCPOG00000009392
UniProt:
H0VEI8
LinkDB
All DBs
Position
Unknown
AA seq
1002 aa
AA seq
DB search
MIFSVLRHPLRWLGRPRGRALSLATMEVAFRGVRKVLCVAEKNDAAKGIADLLSNGRMRR
REGLSKFNKIYEFDYYLYGQNVTMIMTSVSGHLLAHDFQMQFRKWHSCNPLVLFEAGIEK
YCPENFIDIKKTLERETRQCQALVIWTDCDREGENIGFEIIHVCKAVKPSLQVLRARFSE
ITPHAVRTACQNLTEPDQRVSDAVDVRQELDLRIGAAFTRFQTLRLQKVFPEVLAEQLIS
YGSCQFPTLGFVVERFKAIQAFVPEIFHRIKVTHDHEDGIVDFNWKRHRLFNHTACLVLY
QLCMEDPMATVVEVRSKPKSKWRPQALDTVELEKLASRKLKINAKETMRIAEKLYTQGYI
SYPRTETNIFPKDLNLMALVEQQTQDPHWGPFAQSILERGGPTPRNGNKSDQAHPPIHPT
KYTSNLQGDERRLYEFIVRHFLACCSQDAQGQETTVEIDIARERFVANGLTILARNYLDV
YPYDRWSDKLLPVYEEGSHFQPSTIEMLDGETSPPQLLTEADLIALMEKHGIGTDATHAE
HIETIKARMYVGLTSDKRFLPGHLGMGLVEGYDSMGYEMSKPDLRAELEADLKLICEGKK
DKSVVLRQQVQKYKQVFIEAVAKAKKLDEALSQYFGEGTETLQQEEIYPAMPEPILKCPQ
CNKDLVLKTKKSGGFYLSCTGFPECRLAMWFPDSVLEVSRDGSVCPVCQPAPVYRLKFRF
KRGSLPPTMPLEFVGCIGGCDETLKEILGLRFSRGPPRGSQPSGHLQASQSVNRMDSSHS
RPPGSRLTRPSQAQAQNLLLPAAATGESNSVTCNCGQEAVLLTVRKDGPNQGRQFYKCST
GACSFFLWADSSPPGAGGALDSASRLPGSSFGHPAGPGHHADGFSSNPSGGSGSGTFCLC
SHPAVTRTVQKDGPNKGRQFHTCAKPREQQCGFFQWADENTAPGTFTALPWPRGRGKTQG
PEARSKRAGTTSSDPGSTTKKSRKCSLCHQPGHTRPFCHQNR
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgatcttttcggttttgcgtcacccactccggtggcttggacggcccaggggccgtgca
ttgtccctcgccaccatggaagtggccttccgaggcgtacggaaagtcctctgtgtggcg
gagaaaaacgacgcggccaagggaatcgctgatctgctgtccaacggtcgcatgagacgg
agagaagggctttctaaattcaacaagatctatgaatttgattattatctgtatggccag
aatgttaccatgataatgacttcagtttctggacacttgctggctcatgatttccagatg
cagtttcgaaaatggcacagctgcaatcccctagtcctctttgaagcaggaattgaaaaa
tactgcccagagaattttatagacatcaagaaaactctagaacgagagacacgacagtgc
caagccctggtgatctggactgactgtgacagagaaggtgaaaacatcgggtttgagatt
atccatgtgtgcaaggcagtgaagccgagtctgcaggtgttaagagcccggttctctgag
atcactccccacgctgtcagaacagcctgtcagaacctgactgagccagatcagagagtc
agtgatgctgtggatgtgaggcaggaactggacctgaggatcggagctgccttcactcgg
ttccagactctgcggctccagaaggtttttcctgaagtgctggccgagcagctcatcagc
tatggcagctgccagttccccacactgggctttgtggtggaaaggttcaaagccattcag
gcctttgtgcctgaaatcttccatagaatcaaagtaactcatgaccacgaagatggtatt
gtcgatttcaactggaaaaggcatcgtctctttaaccacacagcttgtcttgtcctctat
cagttgtgtatggaggatcccatggcaactgtagtggaagtcaggtcaaagccgaagagc
aagtggaggcctcaagctttggatactgtggagctggagaaactggcctctcgaaagttg
aaaataaatgcgaaggaaaccatgagaattgctgaaaagctctacacccaagggtacatc
agctatccccgaacagagacaaatattttccccaaagacttaaacttgatggcgttggtg
gaacagcagacccaggatccacactggggaccctttgcgcagagcattctagaacggggt
ggtcccaccccacgcaatggaaataagtccgaccaagctcaccctcccattcaccccacc
aaatataccagcaacttgcagggagatgaacggcggctgtatgagttcattgttcgtcat
ttcctagcttgctgctcccaagatgctcagggacaggagacgactgtggagattgacatt
gctcgggaacgctttgtggccaatggcctcacgattctagctcgaaactatctggatgtg
tatccgtatgatcgctggagtgacaagctgctccctgtctatgaggaaggctcccacttt
cagcccagcactatagagatgctagatggggagaccagccctccacagctgctcaccgag
gccgacctcatcgctctcatggagaaacatggcattggtactgatgccactcacgcggag
cacattgagaccatcaaagcacggatgtatgttgggctcacgtctgacaagcgattcctc
cccggacacctaggcatgggactagtggaaggttatgactccatgggctatgagatgtct
aagcctgacctccgggctgagctggaagctgatctgaaattgatctgtgaaggcaagaag
gacaagtctgtagttctgaggcaacaggtgcagaaatataaacaggttttcattgaagca
gtggctaaggcgaagaagttggatgaggccttgtcccagtactttggggaaggaacagag
acactgcagcaagaagagatctacccagccatgccagagcccatcctgaagtgcccacag
tgcaacaaagacctagtcctaaagacgaagaagagtggtggtttctaccttagctgcaca
ggtttcccagaatgccgactggccatgtggtttcctgactcagttctggaagtcagcagg
gatggcagcgtgtgtccagtctgtcagccggcacccgtgtacaggttgaagttcagattc
aagcgtgggagccttccccccaccatgcccttggagtttgtgggctgcattggtggatgc
gatgagacgctgaaggaaatcctgggcctgcgattttcacggggtcctcctagaggcagc
cagccctctggccacctgcaggctagccagtctgtgaacaggatggacagcagccactcc
cgccctcccggcagtagactgaccagaccctcacaggctcaggcccaaaacctccttctg
ccagctgctgccaccggtgagagcaactccgtgacttgcaactgtggccaggaggctgtg
ctgctcaccgtgcgcaaggacggccccaaccagggtcggcagttctacaagtgcagcact
ggtgcctgcagcttcttcctctgggccgacagcagccctcccggcgcgggaggggccctt
gactctgcgtcaagactcccaggcagctcttttggacatccagcaggcccaggccaccac
gctgatgggttcagcagcaaccctagtgggggcagtggcagcggcacattctgcctgtgc
agccaccctgccgtcaccaggaccgtgcagaaggacggtcccaacaaggggcgccagttc
cacacgtgtgccaagccacgggagcagcagtgtggcttctttcagtgggctgatgagaac
acggccccagggacttttacagcccttccttggccaagaggcagaggaaaaacccagggg
ccagaagccaggagcaaaagagccgggaccacttcctcagacccagggtccacaacaaag
aaatcacggaaatgcagtctttgccaccagcctggacacacccgccccttctgtcaccag
aatagatga
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integrated database retrieval system
