Cavia porcellus (domestic guinea pig): 100733451 Help Entry 100733451         CDS       T07777                                  Name (RefSeq) AFG3-like protein 1   KO K08956   AFG3 family protein [EC:3.4.24.-] Organism cpoc  Cavia porcellus (domestic guinea pig) Pathway cpoc05017   Spinocerebellar ataxia Brite KEGG Orthology (KO) [BR:cpoc00001]  09160 Human Diseases   09164 Neurodegenerative disease    05017 Spinocerebellar ataxia     100733451  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:cpoc01002]     100733451   09182 Protein families: genetic information processing    03110 Chaperones and folding catalysts [BR:cpoc03110]     100733451 Peptidases and inhibitors [BR:cpoc01002]  Metallo peptidases   Family M41: FtsH endopeptidase family    100733451 Chaperones and folding catalysts [BR:cpoc03110]  Other chaperones and cochaperones   AAA proteases    100733451 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Peptidase_M41 AAA AAA_lid_3 FtsH_ext AAA_22 AAA_5 TIP49 AAA_16 AAA_2 RuvB_N nSTAND3 AAA_14 Mg_chelatase AAA_17 IstB_IS21 AAA_28 Motif Other DBs NCBI-GeneID:  100733451 NCBI-ProteinID:  XP_003461259 Ensembl:  ENSCPOG00000001140 UniProt:  H0UVJ1 LinkDB All DBs Position Unknown AA seq 805 aa AA seqDB search MSRRLVAAVGRRTVVGRLSVLWRYSCGPGDRKTVWDGVSVLMAAQQCLQGVHFQQLALQG RPISFSQRLCSKPPKGFEKFFERSGRNTDSKKSTALRKETGKPKNAGAGGGGSKRGGKGD DFSWWKWIQKGEFPWNDKDFRNLAILGTGVAVGVFYFYFRDPGKEITWKHFVQYYLARGL VDRLEVVNKQFVRVIPPPGTTSEKFVWFNIGSIDTFERNLESAQWELAIEPTNQAAVVYS TESDGSFLRSLVPTLLLVGILLYAVRRGPMRAGHGGRGGGLFSVGETTAKILKSNIDVRF ADVAGCEEAKLEIMEFVNFLNPKQYQDLGAKIPKGAMLTGPPGTGKTLLAKATAGEASVP FITVNGSEFLEMFVGVGPARVHDMFAIARKNAPCILFIDEIDAIGQKRGRGHLGGQSEQE NTLNQMLVEMDGFNSTTNVVVLAGTNRPDILDPALMRPGRFDRQIYIGPPDIKGRSSIFK VHLRPLKLSKSLSKDALARKLAALTPGFTGADISNVCNEAALIAARYLSPSVQEKHFEQA IERVIGGLEKKTQVLQPSEKTTVAYHEAGHAVVGWFLEHADPLLKVSIIPRGKGLGYAQY LPREQHLYTREQLFDRMCMMLGGRVAEQLFFGRITTGAQDDLRKVTQSAYAQIVQFGMSE RLGQVSFDLPQQGEALMEKPYSEATAQLIDEEVRHLISSAYDRTLQLLTQCREQVEKVGR RLLEKEVLEKADMVELLGPRPFAEKSTYEEFVEGTGSLEENTSLPEGLKDWNRGEEEGGT EQYLARSTAAATSSESNCQNHQKAH NT seq 2418 nt NT seq  +upstreamnt  +downstreamnt atgtcgcgtcggctggtggcagcggtaggccgtcggacggtagtcgggcggctttcagtg ctgtggcgttacagttgtggtccaggagaccgcaagacagtctgggacggtgtgagcgtc ctgatggccgcccagcagtgcctccagggagtccactttcagcagctggctttgcaggga agaccaatatcattttcccaaaggctgtgttcaaagccacccaaaggatttgagaaattt tttgagaggagtggaagaaacacagattcaaaaaaatcaacagctctgagaaaggaaact ggtaaaccaaagaatgctggggctggaggaggtggaagcaagagaggaggaaaaggggat gatttttcgtggtggaaatggatacagaagggagagtttccctggaatgacaaggatttc cgaaacctggccattttggggacaggcgttgctgtgggagttttctatttctattttcga gatcctggaaaagaaatcacctggaagcactttgtgcagtattacctggccagaggtctg gtggaccgactggaagttgtaaataaacagtttgtacgggttattcctccccctgggacc acttctgagaagtttgtgtggttcaacattggcagtattgatacctttgagcggaacctg gagtctgctcagtgggagttggcgattgagcccaccaaccaggctgcagtagtctacagc actgagagtgatggctcttttctgcgaagcctggtgcccacccttctcctggttggcata cttctctatgcagtgaggaggggcccaatgagggctgggcacggtggccgaggagggggc ctcttcagtgttggtgagacaacagccaagatcctaaagagcaacatcgatgtgcgattt gcagacgtagctggctgtgaagaagccaaattggaaattatggagtttgtcaatttcctg aaccccaagcagtatcaggacttaggagccaaaatcccaaagggagccatgctcactggc ccacctggtactggcaaaacacttcttgccaaagcaactgcaggggaggccagcgtgccc ttcatcactgtgaatgggtcggagttcctggaaatgtttgttggtgttgggccagcaagg gtccatgacatgtttgcaatagccaggaaaaatgctccttgtatcttgttcattgatgag atagatgccattggccagaagcgaggccgtgggcaccttgggggtcagagtgaacaggag aacaccctgaaccagatgctcgtggagatggatggcttcaactctaccaccaatgtggtg gtgctggcaggcaccaaccgccctgacatccttgacccagccctgatgcgccctggccgc tttgaccgccagatttatattggtccccctgacatcaaaggcaggtcatccatcttcaag gttcacctgcgcccactcaagttgtccaaaagcctcagtaaggatgccctggcacggaag ctggcagctctcactccaggattcactggtgctgatatttctaatgtgtgcaatgaagcc gcactgattgcagcccgctacctgagtccttctgttcaggagaagcacttcgaacaagcc atcgaaagggttatcggaggtcttgagaagaagacccaggtcttacagcccagtgaaaag acgactgtggcctaccatgaggctgggcatgcagtagtgggctggttcctggagcatgca gaccctttgctgaaggtgtccatcatcccccgtggcaaggggcttggctatgcccaatac ctgccccgggaacagcacctttatacacgagagcagctctttgaccgcatgtgcatgatg ctcgggggccgggtggctgagcagctgttctttgggcggatcactactggggcacaagat gacctgaggaaagtcacacagagtgcgtacgcacagattgtgcagtttgggatgagtgag aggctgggccaggtgtcctttgacctcccacaacaaggtgaggcccttatggagaagccc tatagcgaggccactgcccagctcattgatgaggaggttcgtcatctcatcagctctgcc tatgatcgtacgctacagctgctgactcagtgccgggaacaggtggaaaaggtgggccgg cggcttctcgaaaaggaggtgctagagaaggctgacatggtcgagctgctgggcccacgg cccttcgcggagaagtccacctatgaggagtttgtggagggcactggcagcctggaggag aacacatcccttcctgaggggctgaaggactggaaccggggagaggaggaggggggcact gagcagtacttggcgcgtagcaccgctgcagccacatcctctgagagcaactgccagaac caccagaaagcacattaa

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