Cavia porcellus (domestic guinea pig): 100733540
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Entry
100733540 CDS
T07777
Symbol
U2surp
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein
KO
K12842
U2-associated protein SR140
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100733540 (U2surp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpoc03041
]
100733540 (U2surp)
Spliceosome [BR:
cpoc03041
]
Complex A
U2 snRNP components
U2 related factors
100733540 (U2surp)
Complex B
100733540 (U2surp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Surp
RRM_1
cwf21
CID
CTK3
SET_assoc
RRM_7
Motif
Other DBs
NCBI-GeneID:
100733540
NCBI-ProteinID:
XP_013015095
Ensembl:
ENSCPOG00000011656
LinkDB
All DBs
Position
Unknown
AA seq
957 aa
AA seq
DB search
MADKTPGGSQKASSKTRSSDVHSSGSSDAHMDASGPSDSDMPSRTRPKSPRKHNYRNEST
RENLCDSPHQNLSRPLLENKLKAFSIGKMSTAKRTLSKKEQEELKKKVMFKNTNLSHEVH
SEESNVYPYAIQTLIVNIFNRIQEERDERHKTKGRLSRFEPPQSDSDGQRRSMDAPSRRN
RSSGVLDDYAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDE
ERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGKAVPIPPHPIYIPPSMMEH
TLPPPPSGLPFNAQPRERLKNPNAPMLPPPKNKEDFEKTLSQAIVKVVIPTERNLLALIH
RMIEFVVREGPMFEAMIMNREINNPMFRFLFENQTPAHVYYRWKLYSILQGDSPTKWRTE
DFRMFKNGSFWRPPPLNPYLHGMSEEQETEAFVEEPSKKGALKEEQRDKLEEILRGLTPR
KNDIGDAMVFCLNNAEAAEEIVDCITESLSILKTPLPKKIARLYLVSDVLYNSSAKVANA
SYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFKQRVMTCFRAWEDWAIYPEPFLIKLQ
NIFLGLVNIIEEKETEDVPDDLDGAPIEEELDGAPLEDVDGIPIDATPIDDLDGVPIKNL
DDDLDGVPLDATEDSKKNEPIFKVAPSKWEAVDESELEAQAVTTSKWELFDQHEESEEEE
NQNQEEESEDEEDTQSSKSEEHHLYSNPIKEEIAESKFSKYSEMSEEKRAKLREIELKVM
KFQDELESGKRPKKPGQSFQEQVEHYRDKLLQREKEKELERERERDKKDKEKLESRSKDK
KEKDECTPTRKERKRRHSASPSPSRSSSGRRVKSPSPKSERSERSERSHKESSRSRSSHK
DSPRDVSKKAKRSPSGSRTPKRSRRSRSRSPKKSGKKSRSQSRSPHRSHKKSKKNKH
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaaacgccaggcgggtctcagaaggccagttcgaagaccagatcatcagat
gttcattcatctggatcttcagatgcacatatggatgcatctggaccttccgatagtgat
atgccaagtcggacacgaccaaagagcccaagaaaacataattataggaatgaaagtacc
cgtgaaaacctttgtgattctcctcatcagaatctttccagacctcttctggaaaacaaa
cttaaagctttcagcattggaaaaatgagtacagctaagcgaactttaagtaaaaaggaa
caagaggaattaaaaaaaaaggtaatgtttaaaaatacaaatttatcacatgaagtacat
tcagaagagtccaatgtttatccctatgccatccaaaccttgattgtaaatattttcaac
aggattcaagaagagcgtgatgagagacataaaacaaaaggcaggctaagtcgatttgaa
cctcctcaatcagattctgatggtcagcgtcgttctatggatgcaccttcaagaagaaat
agatcatccggtgttcttgatgattatgcacctggctcacatgatgtaggagatccaagt
actactaatttataccttggaaacattaatccacagatgaatgaagaaatgctgtgccaa
gaatttggaagatttggaccactggctagtgtgaaaattatgtggcctagaactgatgaa
gaaagagcaagagagagaaattgtggctttgtggcctttatgaatagacgagatgctgaa
agagctttaaaaaatttaaatggaaaaatgattatgtctttcgaaatgaagttaggttgg
ggtaaagctgtaccgattcctccacatccaatatacattcctccttcaatgatggaacat
acgcttcccccacctccatctggactgccttttaatgcgcagcctagagagcggttaaaa
aaccccaatgctcccatgttaccaccacctaaaaacaaggaggattttgagaagactctg
tcgcaagccatagtcaaagtggttatcccaacagaaaggaatttgctcgccctgatacat
cgaatgatagagtttgttgtacgtgaagggccgatgtttgaagctatgattatgaacaga
gaaatcaacaatcctatgttcaggttcttatttgaaaaccagacaccagcccatgtttac
tacaggtggaagctttattctattctacagggagattctccaactaaatggcggacagag
gattttcgtatgttcaaaaatggatctttttggaggccaccaccattaaatccatacctt
catggaatgtcagaagagcaagaaacagaagcttttgtagaggagcctagtaaaaaggga
gcacttaaggaagaacagagggacaaattagaagaaatcttgcgaggattgactccaagg
aaaaatgatattggagatgcaatggtgttctgtcttaataatgctgaagctgctgaagaa
atagtagactgcattactgaatcattgtccatcttaaagacacctcttcctaaaaagatt
gccaggttatatttggtttctgatgttttgtacaactcttcagccaaagttgccaatgct
tcatattaccgaaaattttttgaaacaaagttatgccagatattttcagaccttaatgct
acctatcgtacaattcaaggccatttacagtctgagaattttaagcaacgagtaatgact
tgcttcagagcatgggaagattgggcaatttatcccgagccatttctgatcaaactacaa
aatattttcttaggacttgtaaatattattgaagaaaaagaaacagaggatgtaccagat
gatctcgatggtgctcccattgaggaagagcttgatggtgcacctctggaagatgtggat
ggaattcccattgacgctactcccattgatgatctcgatggagttcctataaaaaatctt
gatgatgatctggatggagtgcctttggatgcaactgaagactcaaagaagaatgaacct
atatttaaagttgctccatcaaaatgggaagctgtagatgaatctgaattggaagcacag
gctgtcacaacttctaagtgggaattatttgaccagcatgaagaatcagaagaagaagaa
aatcaaaatcaggaagaagaaagtgaagatgaagaagatactcaaagttccaaatccgaa
gaacatcatttgtactccaacccaatcaaagaagaaatagctgagtccaagttctctaag
tactcagaaatgagtgaagaaaaacgagcaaaacttcgtgaaattgagctcaaagttatg
aagtttcaggatgagttggaatctggaaagagacctaaaaaaccaggacaaagtttccaa
gagcaagttgagcactacagagataaacttcttcaacgagagaaagagaaagaattagaa
agagaacgagaaagagacaagaaagataaagaaaaattggaatctcgatccaaagacaag
aaggaaaaagatgagtgcactccaacaaggaaagaaaggaaaagacggcacagtgcatcc
cccagcccatctcgcagtagcagtggtagacgagtgaaatcgccatcgccaaaatcagag
cgatcagagcgttcagaaagatctcataaggaaagctcacggtccaggtcatctcacaaa
gactctcctagagatgttagcaaaaaagccaaaagatcaccatctggttcaaggacgcct
aagaggtctaggcgatcacggtctagatcccctaaaaaatcagggaagaaatccagatcc
cagtcccgatctccacacaggtctcataaaaagtcaaagaaaaacaaacactga
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