Cavia porcellus (domestic guinea pig): 100733896
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Entry
100733896 CDS
T07777
Symbol
Pdzrn3
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase PDZRN3
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpoc04121
]
100733896 (Pdzrn3)
Enzymes [BR:
cpoc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100733896 (Pdzrn3)
Ubiquitin system [BR:
cpoc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
100733896 (Pdzrn3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
zf-C3HC4
Sina_ZnF
zf-C3HC4_3
zf-TRAF
zf-C3HC4_4
zf-RING_5
Prok-RING_4
TRAF3_RING
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
100733896
NCBI-ProteinID:
XP_005008635
LinkDB
All DBs
Position
Unknown
AA seq
1070 aa
AA seq
DB search
MGFELDRFDGDVDPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPALCRGRL
SAKELNHVLPLKRLILKLDIKCAHAERGCSRVVKLQELPEHLERCDFAPARCRHAGCGQV
LLRRDVEAHMRDACDARPVGRCQEGCGLPLTHGEQSAGGHCCARALRXHNAALQARLGAL
HKALKKEXLRAGKREKSLVAQLAAAQLELQMTALRYQKKFTEYSARLDSLSRCVASQAPG
GGKGEETKSLTLVLHRDSGSLGFNIIGGRPCVDNQDGSSSEGIFVSKIVDSGPAAKEGGL
HIHDRIIEVNGKDLSRATHDQAVEAFKTAKEPIVVQVLRRTPRTKMFTLPAESQLVDTGT
QTDITFEHIMALTKMSSPSPPVLDPYLLPEEHPSAHEYYDPNDYMGDIHQEMDREELELE
EVDLYRLSSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEV
QNREEAVALLTSEENKNFSLLIARPELQLDEGWMDDDRNDFLDDLHMDMLEEQHHQAMQF
TASVLQQKKHEEDGGTTDTATILSNQHEKDSGVGRTDESTRNEESSEQENNGDDATASTN
PLAGQRKLTCSQDTLGSGDLPFSNESFVSADCTEVDYLGIPVDECERFRELLELKCQVKS
TSPYSLYYPSSALDATKSDPESVDKELELLNEELRSTELECLSIVRAHKMQQLKEQYREP
WLLHHGRFRNYNTSLDVRRHELSDITELPEKSDKDSSSAYNTGESCRSTPLTLEISPDNS
LRRAAEGLSCSGSEGAGAMGTAEGYGPSPKNLLAITEDPEVGTPNYSPSSKELDPSQPLE
SKERRANEGSRSPLGSPKLGSAYLSSSPQSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYA
QSQMSLVSMCKDLASSSPSEPRMEWKVKIRSDGTRYITKRPVRDRLLRERALKIREERSG
MTTDDDAVSEMKMGRYWSKEERKQHLVKAKEQRRRREFMMQSRLDCLKEQQGADERKEMN
ILELSHKKMMKKRNKKIFDNWMTIQELLTHGTKSPDGTRVYNSFLSVTTV
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgagctggaccgctttgatggcgacgtggacccggatctgaagtgtgcgctc
tgccacaaggtcctggaggacccgctgaccaccccgtgcggccacgtcttctgcgccggc
tgcgtgctgccctgggtggtgcaggagggcagctgcccggctctctgccgcggccgcctg
tcggcgaaagagctcaaccacgtcctgccgctcaagcgcctcatcctcaagctggacatc
aagtgcgcgcacgcggagcgcggctgcagccgggtggtcaagctacaggagcttccggag
cacctcgagcgctgcgacttcgcgcccgcgcgctgccgccacgcgggctgtggccaggtg
ctgctgcggcgcgacgtggaggcacacatgcgcgacgcgtgcgatgcgcggcccgtgggc
cgctgccaggagggctgtgggctgcccctcacgcacggcgagcagagcgcgggcggccac
tgctgcgcgcgggcattacggncgcacaacgctgcgctgcaggcccgactgggcgcgctg
cacaaggcgctcaagaaggagncgctgcgcgcagggaagcgcgagaagtcgctggtggcg
cagctggccgcagcgcagcttgagctgcaaatgaccgcgttgcgctaccagaagaagttc
actgagtacagcgcgcgcctcgactcgctcagccgctgcgtggccagccaggcgcccggc
ggcgggaagggtgaagaaaccaaaagcctgacccttgtcctgcatcgggattctggctcc
ctgggattcaatattattggtggccggccctgtgtggacaaccaagatggatcatccagc
gaaggaatctttgtatccaaaatagttgacagtgggcctgcagccaaggaaggaggcctg
cacattcatgacaggattattgaggtcaatggtaaagacttatccagagcaactcatgac
caggctgtggaagcttttaaaacagctaaggagcccattgtggtacaggtgttaaggaga
acacctcggaccaaaatgttcacccttccagcggagtcacagttggtggacacaggcacc
cagaccgacatcaccttcgagcacatcatggccctgacaaagatgtcctctcccagcccg
cctgtgctagacccctatctcctgccagaggagcatccttcagcccatgaatactacgac
ccaaatgactacatgggggacatccaccaggagatggacagagaggagctggagctggag
gaagtggatctctacagactaagcagccaggacaagctgggcctcaccgtgtgctaccgg
acggatgacgaggatgacattgggatttatataagtgagattgatcctaacagcattgca
gctaaggacggacgcatccgcgaaggagaccgcatcatccagattaatgggatagaggtg
cagaaccgcgaagaggctgtggctcttttgaccagtgaagaaaataagaacttttcactg
ctgattgcgaggcctgaactccagctggacgagggctggatggacgatgacaggaatgac
tttctcgatgacctgcacatggacatgctagaggagcagcatcaccaggccatgcagttc
acagccagcgtgctccagcagaagaagcacgaggaagatggtgggaccacagacacagcc
accatcctgtctaaccagcatgagaaggacagcggtgtggggcggacggatgagagcacc
cgcaacgaggagagttcagagcaggagaacaacggggacgatgccacagcgtccaccaac
ccgctggcaggccagaggaagctcacatgcagccaagacacactgggcagtggagacctg
cccttcagcaacgagtcctttgtctcggccgactgcaccgaagtggactacctgggcatc
ccggtggacgagtgcgagcgcttccgcgagcttttggagctcaagtgccaggtgaagagc
accagcccctacagcctctactaccccagcagcgctctggacgccacaaagagtgatccc
gagagcgtggacaaggaactggagctactcaatgaggagctgcgcagcaccgagctggag
tgcctgagcatcgtgcgcgcgcacaaaatgcagcagctcaaggagcagtaccgtgagccc
tggctgctgcaccacggccgcttccgcaactacaacaccagcctcgacgtacgccgtcac
gagctgtcagacatcaccgagctgcccgagaagtccgacaaagacagctcaagcgcctac
aacactggggagagctgccggagcaccccgctcaccctggagatctcccccgacaactcc
ctgcggagggcggccgagggcctcagctgctccggcagtgaaggggctggggccatggga
accgctgagggttacggaccctcgcctaagaacctgctcgccatcaccgaagaccccgag
gtcggtaccccaaactacagcccttcatccaaagagctggaccccagccaacccctggaa
agcaaagagcgtagagccaacgagggcagcaggagcccccttggcagcccgaagctgggc
agcgcctacctgtcgtcctccccgcagtccccgtacaagcacgcacacatcccggcccat
gcgcagcactaccagagctacatgcagctcatccagcagaagtccgccgtggagtacgcg
cagagccagatgagcctggtgagcatgtgcaaggacctggcctcttccagcccttcggag
cccaggatggagtggaaggtgaagatccgcagcgacggcacgcgctacatcaccaagagg
ccggtgcgcgaccgcctgctgagggagcgcgcgctcaagatccgcgaggagcgcagcggc
atgaccacagacgacgacgcggtgagcgagatgaagatggggcgctactggagcaaggag
gagcgcaagcagcacctggtgaaggccaaggagcagaggcgcaggcgcgagttcatgatg
cagagcaggttggattgtctgaaggagcagcaaggggccgacgaaaggaaggagatgaac
atcctggaactgagccacaaaaagatgatgaagaagaggaataaaaaaatctttgacaat
tggatgactattcaagaactcttaacgcacggtacaaaatccccagacggcactagagta
tacaattccttcttatcggtgactactgtataa
DBGET
integrated database retrieval system
