Cavia porcellus (domestic guinea pig): 100733907
Help
Entry
100733907 CDS
T07777
Symbol
Col2a1
Name
(RefSeq) collagen alpha-1(II) chain isoform X1
KO
K19719
collagen type II alpha
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc04151
PI3K-Akt signaling pathway
cpoc04510
Focal adhesion
cpoc04512
ECM-receptor interaction
cpoc04518
Integrin signaling
cpoc04974
Protein digestion and absorption
cpoc05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100733907 (Col2a1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100733907 (Col2a1)
04518 Integrin signaling
100733907 (Col2a1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100733907 (Col2a1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100733907 (Col2a1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
100733907 (Col2a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cpoc00536
]
100733907 (Col2a1)
Glycosaminoglycan binding proteins [BR:
cpoc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100733907 (Col2a1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
VWC2L_2nd
Motif
Other DBs
NCBI-GeneID:
100733907
NCBI-ProteinID:
XP_003475884
Ensembl:
ENSCPOG00000000832
UniProt:
H0UUU2
LinkDB
All DBs
Position
Unknown
AA seq
1487 aa
AA seq
DB search
MAHLGPLQTLVLLTLLVAAVLRCQGQDIRKNPSCLQNGQRYNDKDVWKPEPCRICVCDEG
IVLCDSVICEDIQDCPNPEILFGECCPICPADLTTASGQPGPKGQKGEPGDIKDIVGPKG
PPGPQGPAGEQGPRGDRGEKGEKGSPGPRGRDGEPGTPGNPGPAGPPGPPGPAGLGGNFA
AQMAGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMG
PRGPPGPPGKSGDDGEPGKPGKSGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKG
EAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPIG
PAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGNPGSPGPAGASGNPGTDGIPGAKG
SAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQAGEPGIAGFKGEQGPKGETGPAGPQG
APGPAGEEGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAG
PKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPG
VMGFPGPKGANGEPGKAGEKGLAGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPG
PSGFQGLPGPPGTPGESGKPGEQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGARG
LPGTPGTDGPKGAAGPVGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPG
KDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPG
ADGQPGAKGEQGEAGQKGDVGSPGPQGPSGAPGPQGPTGVTGPKGSRGAQGPPGVTGFPG
AAGRVGPPGSNGNPGPPGPPGPAGKDGPKGVRGDSGPPGRAGDPGLQGPAGPPGEKGEPG
DDGVSGADGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPG
PVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGPSG
PTGKQGDRGEAGAQGPMGPAGPAGARGIPGPQGPRGDKGESGEPGERGVKGHRGFTGLQG
LPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAG
PPGNPGPPGPPGPPGPGIDMSAFAGLGQREKGPDPLQYMRADEAASTLRQHDVEVDATLK
SLNNQIESIRSPEGSRKNPARTCRDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMETG
ETCVYPNPANVPKKNWWSSKTKEKKHIWFGETINGGFHFSYGDDNLAPNTANVQMTFLRL
LSTEGSQNITYHCKNSIAYLDEAAGNLKKALLIQGSNDVEIRAEGNSRFTYTVLKDGCTK
HTGKWGKTVIEYRSQKTSRLPIIDIAPMDIGGPEQEFGVDLGPVCFL
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atggcccacctcgggcctctccagacgctggtactgctgacgctgctcgtcgccgctgtc
ctgcggtgccagggccaagatatcaggaagaaccccagctgcttgcagaatgggcagagg
tataatgataaagatgtatggaagcctgagccctgccggatctgtgtctgtgacgaaggg
attgtcctctgcgatagtgtaatctgtgaagacatacaagactgccccaaccctgaaatc
ctcttcggagagtgctgccccatctgccctgctgacctcaccactgccagtgggcaacca
ggaccaaagggacagaaaggagaacctggagacattaaggatattgtaggacccaaagga
cctcctgggcctcagggacctgcaggtgaacaaggacccagaggtgatcgtggtgaaaaa
ggtgaaaaaggtagccctggacctcgtggcagagatggagagcctgggacccctggaaat
cctggccccgctggtcctcccggcccacctggtcccgctggccttggtggaaactttgct
gcccagatggctggaggatttgatgagaaggctggtggtgcccagatgggagtaatgcaa
ggaccaatgggccccatgggaccccgaggacctccaggccctgccggtgctcctggccct
caaggatttcagggcaaccctggcgaacctggtgaacctggtgtttctggtcccatgggt
cctcgtggtcctccaggcccccctggaaaatctggcgatgatggtgaacctggaaagcct
ggaaaatctggtgaaagaggcccacctggccctcagggtgctcgtggctttccaggaacc
ccaggccttcctggtgtcaaaggtcacagaggttacccaggcctagatggtgccaaagga
gaagctggtgccccaggcgtgaagggtgagagtggctcccctggggagaatggttctcca
ggcccaatgggaccccgtggcctgcctggtgagagaggacggactggccccgctggtgct
gcgggtgcccgaggcaacgacggccagccaggcccagctggacctccgggtcccatcggt
ccggctggtggtcctggcttccctggtgctcctggtgccaagggtgaggctggccccact
ggagcccgtggtcctgaaggtgctcaaggtcctcgaggcgaacctggcaaccctggctct
cctgggcctgctggtgcttccggaaaccccggaactgatggcattcctggagccaaagga
tctgcgggtgctcctgggattgctggtgctccaggcttccctgggcctcgtggtcctcct
ggtcctcaaggtgcaacgggtcctctgggtccaaagggtcaggcgggtgagcctggtatt
gctggcttcaaaggtgaacaaggcccaaagggagaaactggtcctgctggcccccaggga
gctcctggtccagctggtgaagaaggcaaaagaggtgcccgtggagagcctggcggtgtt
gggcccattggtccccctggagagagaggtgcccctggaaaccgtggtttcccaggtcag
gatggtctggcaggtcccaagggagcccctggagagcgagggcccagtggccttgctggt
cccaagggagccaatggtgaccctggccgtcctggagaacctggccttcctggagcccgg
ggtctcactggtcgccctggtgatgctggtcctcaaggcaaagttggcccatctggagct
cctggtgaagatgggcgccctggacctccaggtcctcagggggctcgtgggcagcctggt
gtcatgggtttccctggtcccaagggtgccaatggcgagcctggcaaagctggtgagaaa
ggactggctggtgctcctggtctaagaggtcttcctggcaaagatggtgagacgggtgct
gcaggcccccctggccccgctggacctgctggtgaacgaggagagcagggcgctcctggg
ccatctgggttccagggacttcctggccctcccggtaccccgggtgaaagtggaaaacca
ggtgaacagggtgttcctggtgaagctggagctcctggccttgtgggtcctaggggtgaa
cgaggcttcccaggtgaacgtggatctcctggtgcccagggcctccagggcgcccgtggt
ctccctggcactcctggcacagatggtcccaaaggtgcagccggcccagttggcccccct
ggggctcagggtcctccaggtctgcagggaatgcctggtgagagaggagcagcaggcatc
gctggccccaagggagacagaggtgatgtcggtgagaaaggccccgagggagcccctgga
aaagatggcggacgaggtctgactggtcccatcggcccccctggaccagcaggagccaat
ggtgagaagggagaagtcggacctcctggccccgctggaagtgctggtgctcgtggtgcc
ccgggtgaacgtggggagactgggcctcctggacctgctggatttgctggacctcctggt
gctgatggacagcctggggccaagggtgaacaaggagaggctggacagaaaggcgatgtt
ggttcccctggtcctcagggcccctctggagcacctgggcctcagggtcctactggagtg
acaggacctaaaggatcccgaggtgctcaaggacccccaggagtcaccggattccctgga
gctgctggccgcgtcggacccccaggttccaatggcaaccctggaccccctggtccccct
ggtcctgctggaaaagatggtcccaaaggtgttcgaggagacagtggtccccctggccga
gctggtgaccctggcctccaaggtcctgcaggaccccctggcgagaagggagagcccgga
gatgatggtgtttctggtgccgatggtcctccaggtccccagggtctggctggacagaga
ggtattgttggtctgccaggacagcgtggtgagagagggtttccaggactgcccggccca
tcgggtgagcctggcaagcagggtgcaccaggtgcatctggagaccgaggtcctcctggc
cctgtggggcctcctggcctgactggtcctgcaggtgaacccggacgagagggaagtcct
ggtgctgacggtcctcccggcagagatggcgcggctggagtcaagggtgatcgcggggag
actggtgctgtaggagctcccggagcccctgggcctcctggctctcctggcccctctggc
ccaactggaaagcaaggagacagaggagaggctggtgcacaaggccccatgggacccgca
ggaccagctggagcccgtggaatcccaggccctcaaggtccccgaggtgacaaaggagaa
tctggagaacctggagagagaggagtgaagggacaccgaggcttcactggtctgcagggt
ctgcctggccctcctggtccttctggagaccaaggtgcttctggtcctgctggtccctct
gggcctagaggtccccctggccctgttggtccctctggcaaagatggtgctaatggaatc
cctggccccattgggcctcctggtccccgtggacgctcaggtgaaactggccctgctggt
cctcctggaaatcctggaccccctggccctcccggtccccctggccctggcattgacatg
tccgcctttgctggcctgggccagagagaaaagggccccgaccccttgcagtacatgcgg
gcggatgaggcagccagtaccctgagacagcacgatgtggaagtggatgccacactcaag
tccctcaacaaccagattgagagcatccgcagccccgagggctcccgcaagaaccctgct
cgaacctgccgggacctgaaactctgccaccctgagtggaagagcggagactactggatt
gaccccaaccagggatgcaccttggatgccatgaaggtcttctgtaacatggagacaggc
gagacctgcgtctaccccaacccggccaatgtgcccaagaagaactggtggagcagcaag
accaaggagaagaagcacatctggtttggagaaaccatcaatggtggcttccatttcagc
tatggagatgacaacctggctcccaacaccgccaatgttcagatgactttcctgcgcctg
ctgtccaccgagggctcccagaacatcacttaccattgcaagaacagcatcgcctatttg
gatgaagcagctggcaatctcaagaaggccttgctcatccagggatccaatgatgtggag
attcgggctgagggcaacagcaggttcacatacactgtcctgaaggatggctgcacgaaa
cacactggtaagtggggcaagactgtcatcgaataccggtcacagaagacctcgcgcctc
cccatcattgacattgcacctatggacataggagggcccgagcaggaatttggtgtggac
ttagggcctgtctgcttcttgtaa
DBGET
integrated database retrieval system
