Cavia porcellus (domestic guinea pig): 100733981
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Entry
100733981 CDS
T07777
Symbol
Rfc1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03030
DNA replication
cpoc03410
Base excision repair
cpoc03420
Nucleotide excision repair
cpoc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100733981 (Rfc1)
03410 Base excision repair
100733981 (Rfc1)
03420 Nucleotide excision repair
100733981 (Rfc1)
03430 Mismatch repair
100733981 (Rfc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpoc03032
]
100733981 (Rfc1)
03400 DNA repair and recombination proteins [BR:
cpoc03400
]
100733981 (Rfc1)
DNA replication proteins [BR:
cpoc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
100733981 (Rfc1)
DNA repair and recombination proteins [BR:
cpoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
100733981 (Rfc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
BRCT_2
RuvB_N
Rad17
AAA_14
AAA_30
AAA_5
AAA_16
Zeta_toxin
nSTAND3
AAA_17
AAA_18
AAA_33
AAA_7
NPHP3_N
RNA_helicase
NTPase_1
TIP49
AAA_19
Motif
Other DBs
NCBI-GeneID:
100733981
NCBI-ProteinID:
XP_013009784
Ensembl:
ENSCPOG00000004248
UniProt:
H0V2Q7
LinkDB
All DBs
Position
Unknown
AA seq
1153 aa
AA seq
DB search
MDIRKFFGVVPSGKKLVNETVKKNEKTKSAEETLKAKKGIKEIKVNSSYKEDVSKQKQPN
KKKRIIYDSESEAEETVQVKNVKKPSEKLLQSKPGKILRQDPVTYISETDEDDDFMCKRT
ASKAKENGRSTNTYLGTSSMKKSEENTKNKNKPLSPIKLTPTSVLDYFGTGKVQRSDQKM
VASKRKEPSQNTDDSILNDEAIAKQLQLDEDAEQERQLHEDEEFARTLAMLDEEPKTKKA
RKYTEEGETFSSVQANLSKAEKHKYPRKEKFSSERKSYSPNKQTKWEISKESQQHSKLSA
KKTGGPSSPKASSKLALMKTKEESSYKEAEPSPSKRKENVVDVKGEKKTPKKTKSSPAKK
ESVSPEDSEKKRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLTFVITGVLESIERD
EAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKIIDEDGLLDLIRTMPG
KKSKYEIAAEAEMEKGRSKLERTPQKNNQGKRKISPNKKESESKKSKQTPKRDSSTKTIK
KETEVTNVFRRGLDFKEQVAKETNGDSRPRELAGDSSESQVDSLLWVDKYKPTSLKTIIG
QQGDQSCANKLLRWLRNWHKSSPDEKKHAKFGKFTSKDDGSSYKAALLSGPPGVGKTTTA
SLVCQELGYSYVELNASDTRSKNSLKAVVAESLNNTSIKGFYSTSPTELGGAVPSVSAKH
ALIMDEVDGMAGTEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHHCFDLRFQRP
RVEQIKGAMMSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKA
DSHRAKKDIKLGPFDVARKVFAAGEETAHMSLMDKSDLFFHDYSIAPLFVQENYLHVKPV
AAGGDMKKHLMLLSRAADSICDGDLVDSQIRSKQNWSLLPTQAIYASVLPGELMRGYMTQ
FPTFPSWLGKHSSTGKHDRIVQDLALHMSLRTYASKRTVNTDYLSHIRDALVQPLASQGV
EGVQEVVALMDTYYLMKEDFENIMEISSWGGKPSPFSRLDPKVKAAFTRAYNKEAHLTPY
SLQVIKTPRSSTGPMLDSEYSEELPEEDSQSDEKDQDAIESDAMIKKKTKSSKPSKTEKD
KESKKGKGKCLKK
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atggacattcggaagttctttggagttgtaccaagtggaaagaagcttgtaaatgaaaca
gtaaagaagaatgagaaaacgaaatctgctgaagaaactttgaaagcaaagaaaggaata
aaggaaattaaggtaaatagctcttataaagaggatgtctccaaacaaaagcaacctaac
aagaaaaagaggatcatctatgattcagagtcagaggcagaggaaacagtacaggtgaaa
aatgtcaaaaaaccatcagaaaaattgctacagtctaaacctggtaaaattttacgccag
gatcctgttacctacatttcagaaacagatgaagatgatgactttatgtgtaagaggaca
gcctctaaagcaaaagagaatggaaggtctacaaatacttacctgggaacatccagcatg
aagaagagtgaagaaaacactaagaacaagaataagcccttatcaccaataaaactcaca
cccacgtcagtgttagattattttggaactggaaaagtccagagatcagatcagaagatg
gttgcaagcaaaagaaaagagccttcacaaaatacagatgattccatactaaatgatgaa
gccatcgccaagcaattacaacttgatgaagatgcagagcaggaaaggcagttgcatgaa
gatgaagagtttgccagaacattagccatgctggatgaagaacccaagacgaaaaaggcc
cgaaagtacactgaagagggagaaacattttcatctgtccaagccaatttaagtaaagca
gaaaaacataaatatcctcgaaaagaaaaattttcaagtgagagaaaaagctacagtcct
aataagcaaactaagtgggaaatctcaaaagaatctcaacagcattccaagttgtcagct
aagaagacaggaggaccctcttctcctaaggctagttctaaactggcactcatgaaaacg
aaagaagagagttcctataaggaagcagagccctcgccctcaaaaagaaaagaaaatgtt
gttgacgtgaaaggagagaaaaaaactcctaagaaaaccaaaagttctccagctaaaaaa
gagtctgtgagtccagaagattctgaaaagaaacgcactaattatcaagcttatcgaagc
tatttaaatcgagaaggtcccaaagctctgggctccaaggaaataccaaagggagctgaa
aattgcttggaaggcctgacatttgtgatcacaggagtgctggagtccattgagcgagat
gaagccaagtctctaattgaacgttacggtgggaaggtaacaggaaatgttagcaagaaa
acaaactatcttgtcatgggtcgtgacagcggacagtccaagagtgacaaggcagcagct
ttggggacaaaaattattgatgaagatggcctgttggatctgattcgaactatgccaggc
aagaagtccaagtatgaaatagcagctgaagctgagatggagaaaggaaggtccaaattg
gagagaacaccccaaaaaaataaccaaggaaaaagaaaaattagtccaaacaagaaggaa
tcagaatctaaaaagagcaagcagactcctaaaagggacagctctacaaagacaataaaa
aaggaaacagaagtaacaaatgtgtttcggagaggcctggacttcaaggagcaggtggcc
aaggagacaaacggtgacagcaggcctagggagttggctggtgacagcagtgaaagccaa
gtggacagtttgctctgggtggataaatataagccaacctcactcaagaccataattgga
cagcaaggtgaccagagctgtgccaataaattgctccgctggctccgaaactggcataaa
agttctcctgatgagaaaaaacacgcaaagtttggcaaatttactagcaaggacgatggc
tctagttataaagcagcgttgctctcgggccctccaggtgttggcaagaccaccacagct
tctctcgtgtgtcaggaactggggtatagctatgtggaactaaatgcaagtgacacacgg
agtaagaacagtttgaaggcagttgttgctgaatcactgaataataccagcatcaaaggc
ttttattcaacttctcctactgagttgggtggagccgtgccttccgttagtgcaaagcat
gcgctcatcatggatgaagtggacggcatggcaggcactgaggaccggggtgggattcag
gaattaattggcctgataaaacatactaaaattcccattatttgtatgtgcaatgataga
aatcatcccaagattcgctctttggttcatcattgttttgatcttcgttttcaaagacct
cgagttgaacagattaagggtgccatgatgtctattgcatttaaagagggtctaaagatt
cctcctccagctatgaatgaaataattttgggagccaatcaagatatcagacaggtttta
cacaacctgagtatgtggtgtgcacgaagtaaggcactaacgtatgaccaggccaaggcg
gattctcatcgggccaagaaggatatcaaactgggcccatttgatgttgcccgcaaagtg
tttgcagctggagaggagactgctcatatgtcactgatggacaaatcggatctctttttt
cacgactattcgattgcgcccctcttcgtccaggagaactatctccatgtaaagcctgta
gctgcggggggtgacatgaaaaagcacttgatgctcctaagccgagcagcagacagcata
tgcgatggtgacctggtggacagccagatccggagcaagcagaattggagtcttctgccc
acacaggccatttatgccagtgttcttcctggagagttgatgagggggtatatgacccag
tttcccactttcccgagctggctggggaagcactcgtcaacaggcaagcatgaccgaatt
gtgcaggaccttgcactacacatgagtcttagaacttacgccagcaagaggacggtgaac
acggattacctctcgcacataagagacgcacttgtccagcccttggcgtcgcagggggtg
gaaggcgtgcaggaggtggttgcacttatggacacgtactacttgatgaaggaagacttt
gagaatatcatggaaattagcagctggggtggtaaacccagtcccttttccagactggat
cccaaggtgaaagcggccttcacaagagcttacaataaggaggcccacctcaccccatat
tcgcttcaggtgataaagacaccccggtccagtacaggccccatgctggattctgagtac
agtgaagagttacccgaagaggactcccagtctgacgagaaagaccaagacgccatagag
agcgatgctatgatcaagaaaaagacaaaatcttcaaagccctccaaaacggagaaagat
aaggagtccaagaaaggaaaaggaaaatgtttgaagaagtga
DBGET
integrated database retrieval system
