Cavia porcellus (domestic guinea pig): 100734003
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Entry
100734003 CDS
T07777
Symbol
Scn8a
Name
(RefSeq) LOW QUALITY PROTEIN: sodium channel protein type 8 subunit alpha
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
100734003 (Scn8a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpoc04040
]
100734003 (Scn8a)
Ion channels [BR:
cpoc04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
100734003 (Scn8a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
IQ
GPHH
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
100734003
NCBI-ProteinID:
XP_023423444
Ensembl:
ENSCPOG00000015651
LinkDB
All DBs
Position
Unknown
AA seq
1734 aa
AA seq
DB search
MAARLLAPPGPDSFKPFTPESLANIERRIAESKLKKPPKADGSHREDDEDSKPKPNSDLE
AGKSLPFIYGDIPQGLVAVPLEDFDPYYLTQKTFVVLNRGKTLFRFSATPALYILSPFNL
IRRIAIKILIHSVFSMIIMCTILTNCVFMTFSNPPEWSKNVEYTFTGIYTFESVVKILAR
GFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTI
VGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVVWPINFNESYLENGTKGF
DWEEYINNKTNFYTVPGMLEPLLCGNSSDAGQCPEGYQCMKAGRNPNYGYTSFDTFSWAF
LALFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQA
TLEEAEQKEKGPGSLLVSMDQLASYGRKDRINSIMSVVTNTLVEELEESQRKCPPCWYKF
ANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEHVLA
VGNLVFTGIFTAEMFLKLIAMDPYYYFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSF
RLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVC
KINQDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVFMMVMVIGNL
VVLNLFLALLLSSFSADNLAATDDDGEMNNLQISVIRIKKGVAWTKLKVHAFMQAHFKQR
EGDEVKPLDELYEKKANCIANHTGADIHRNGDFQKNGNGTTSGIGSSVEKYIIDEDHMSF
INNPNLTVRVPIAVGESDFENLNTEDVSSESDPEGSKDKLDDTSSSEGSTIDIKPEVEEV
PVEQPEEYLDPDACFTEGCVQRFKCCQVNIEEGLGKSWWILRKTCFLIVEHNWFETFIIF
MILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILEMLLKWTAYGFVKFFTNAWCW
LDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPS
IMNVLLVCLIFWLIFSIMGVNLFAGKYHYCFNETSEIRFEIEFVNNKTECEKLMEGNNTE
IRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKPDEQPKYEDNIYMYIYFVI
FIIFGSFFTLNLFIGVIIDNFNQQKKNFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPR
PLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT
CECVLKMFALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGR
ILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKHEAGIDDMF
NFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCSLDKEHPGSGFKGDCGNPSVGIFFF
VSYIIISFLIVVNMYIAIILENFSVATEESADPLSEDDFETFYEIWEKFDPDATQFIEYC
KLADFADALEHPLRVPKPNTIELIAMDLPMVSGDRIHCLDILFAFTKRVLGDSGELDILR
QQMEERFVASNPSKVSYEPITTTLRRKQEEVSAVVLQRAYRGHLARRGFICKKMTSNKLE
NGGTHREKKESTPSTASLPSYDSVTKPDKEKQQRAEEGRRERAKRQKEVRESKC
NT seq
5205 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgcggctgctcgcaccaccaggccctgatagtttcaaacctttcacccctgag
tcactggcaaacattgagaggcgcattgctgagagcaagctcaagaaaccaccaaaggct
gatggcagccatcgggaagatgatgaggacagcaagcccaagccaaacagtgacctggaa
gcagggaagagtttgcctttcatctacggggacatcccccaaggcctggttgcggttccc
ctggaggactttgacccatactatttgacgcagaaaacctttgtagtattaaacagaggg
aaaactctcttcagatttagcgccacgcctgccttgtacattttaagtccttttaacctg
ataagaagaatagctattaaaattttgatacattcagtatttagcatgattattatgtgc
actattttgaccaactgtgtattcatgacttttagtaaccctcccgagtggtcgaagaat
gtggagtacacattcacagggatttatacattcgaatcagtagtgaaaatccttgcaaga
ggtttctgcatagatggctttacctttttacgggatccatggaactggttagatttcagt
gtcatcatgatggcatatgtgacagagtttgtggacctgggcaatgtctcagcgctgaga
acattcagggttctccgagctttgaaaactatctctgtaattccaggcctgaagacaatt
gtgggcgccctcattcagtctgtgaagaagctgtcagatgtgatgatcctgacagtattc
tgcctgagtgttttcgccctgattggactgcagctgttcatggggaaccttcgaaacaag
tgtgttgtgtggcccataaacttcaacgagagctatcttgaaaatggcaccaaaggcttt
gactgggaagagtatatcaacaataaaacaaatttttacacagttcctggcatgctggaa
cctttactttgtgggaacagttctgatgccgggcaatgcccagagggataccagtgtatg
aaagcaggaaggaaccccaattacggttacacaagctttgacacttttagctgggccttc
ttggctttgtttcgccttatgactcaggactattgggaaaacttgtatcagttgacctta
cgagcagctggaaaaacttacatgatcttcttcgtcttggtcatctttgtgggttctttc
tatctggtgaacttgattttggctgtggtggccatggcttatgaagagcagaatcaggca
actctagaggaagcagagcaaaaagagaaaggccctggatctcttttagtatccatggac
caactggcctcctatggacgaaaagacagaattaacagtataatgagtgttgttacaaat
actttagtagaagagctggaagagtctcagagaaagtgcccgccatgctggtataaattt
gccaacactttcctcatctgggagtgccatccttattggataaaactgaaagagattgtg
aatttgattgtcatggacccttttgtggacttggctatcaccatctgcattgtactcaac
acactgtttatggcaatggaacaccatcctatgacgccacaatttgaacacgtcttggct
gtaggaaatctggttttcactggaatttttacagcagaaatgttcctgaagctaatagcc
atggatccttattactatttccaagagggctggaacatttttgatggatttattgtctcc
ctcagtttaatggaactgagtctagcagatgtggaggggctttcagtgctgcgatctttc
cgattgctccgagttttcaaactggccaaatcctggcccaccctgaacatgctgatcaag
attattggaaattcagtgggtgcccttggcaacctgaccctggtgctggccattattgtc
ttcatctttgctgtggtgggaatgcagctctttgggaaaagctacaaagaatgtgtctgc
aagatcaaccaggactgtgaacttcctcgctggcacatgcatgactttttccattccttc
ctcattgtctttcgagtattgtgtggggagtggattgagaccatgtgggactgcatggag
gtggcgggccaggccatgtgcctcattgtctttatgatggtcatggtcattggcaacttg
gtggtgctgaatctgtttctggcgttgcttctgagctccttcagtgcagacaacctggca
gcgacagatgacgatggagaaatgaacaacctacagatctccgtcatccgcatcaagaaa
ggtgtggcttggaccaaactgaaagtgcacgcctttatgcaggctcactttaagcaacgt
gagggggatgaagtgaaacctctagatgagctgtatgaaaagaaggccaactgtatcgcc
aaccacactggtgcagacatccacaggaatggtgacttccagaagaatggcaatggcacg
accagcggcattggcagcagtgtggagaagtacatcattgatgaagaccatatgtccttt
atcaacaatcccaacttgactgtgcgagtgcctattgcagtaggagagtctgattttgag
aacctcaacacagaagatgttagcagcgagtcggatcctgagggcagcaaagataaattg
gatgatactagctcctctgaaggaagtaccatcgatatcaagccagaagtagaagaagtc
cctgtggaacagcctgaggagtacttggatccagatgcctgcttcacagaaggttgtgtc
cagcggttcaagtgctgccaggtcaacattgaggaagggctgggcaagtcttggtggatc
ctgaggaaaacctgctttctcatcgtagagcacaattggtttgagactttcatcatcttc
atgattctgctcagcagtggtgccctggcttttgaggacatctacattgaacagaggaag
accattcgcactattctggaatatgctgacaaagtcttcacctacatcttcatcctggag
atgttgctcaagtggacggcctatgggtttgtcaagttcttcaccaatgcctggtgctgg
ctggacttcctcattgtggctgtctctttagtcagccttatagctaatgccctgggctac
tcggaactaggtgccataaagtcccttaggaccctaagagctttgagacccttaagagcc
ttatcacgatttgaagggatgagggtggtggtgaatgccttggtgggcgccatcccctcc
atcatgaatgtgctgctggtgtgtctcatcttctggctgattttcagcatcatgggcgtt
aacctgtttgccggcaaataccattactgcttcaatgagacttcagagatccgattcgaa
attgaatttgtcaacaataaaactgaatgtgagaagctcatggagggcaacaacacagag
attagatggaagaacgtgaagatcaactttgacaacgtcggggcaggctatctggccctt
cttcaagtagcgaccttcaaaggttggatggacatcatgtatgcagccgtagattcccga
aagcctgatgagcagcctaagtatgaagacaacatctacatgtacatctactttgtcatc
ttcatcatcttcggctccttcttcaccctgaacctcttcattggtgtcatcattgataac
ttcaatcaacaaaagaaaaactttggaggtcaggacatcttcatgactgaggaacagaag
aaatactacaatgccatgaaaaagctgggctcaaagaaaccacagaaacccattccccgt
cctttgaacaaaatccaaggtatcgtctttgattttgtcactcaacaagcctttgatatt
gttatcatgatgctcatctgccttaacatggtgacaatgatggtggagacggacactcag
agcaagcagatggaaaacattctctactggattaatctggtcttcgtcatcttcttcacc
tgtgagtgtgtgctcaaaatgtttgccttgaggcactactacttcaccattggctggaac
atctttgacttcgtggttgtcatcctctccattgtgggaatgtttctggctgatatcatt
gagaaatactttgtttccccaaccctattccgagtcatccgattggcccgtattgggcgc
atcttgcgtctaatcaaaggcgccaaagggattcgtaccctgctttttgccttaatgatg
tccttacctgccctgttcaacattggccttctgctcttcctggtcatgttcatcttctcc
atctttgggatgtccaattttgcatatgtgaagcatgaggctggcattgatgacatgttc
aactttgagacatttggcaacagcatgatctgcctgtttcagatcacaacctcagctggt
tgggatggcctgctgctacccatccttaaccgcccgcctgactgcagccttgacaaggaa
cacccagggagtggctttaagggagactgtgggaacccctctgtaggtatcttcttcttt
gtaagctatatcatcatctccttcttgatcgtggtgaacatgtacattgccatcatctta
gagaacttcagtgtggccacagaagaaagtgcagatcctctgagtgaggatgactttgag
accttctatgagatctgggagaagtttgaccctgatgccacacaattcatcgagtactgt
aagctggcagactttgcagatgccttggagcatcctctccgagtgcccaagcccaacacc
attgagcttatcgccatggatctgccgatggtgagtggggatcgcatccactgcttggac
atcctttttgccttcaccaagcgggtcttgggagacagtggagagttggacatcctgcga
cagcagatggaggagcgatttgtggcttccaatccttccaaagtgtcttacgagccaatc
acaaccacactgcggcgaaagcaggaagaggtatctgcagtggtcctgcaacgcgcctac
cggggacatttggcaaggcgaggcttcatctgcaaaaagatgacttcgaataagctagaa
aatggaggcacccacagggagaaaaaggagagcaccccatccacagcctccctcccatcc
tatgacagtgtgaccaaacctgacaaggagaaacagcaacgggcagaggaaggaagaagg
gaaagagccaaaagacaaaaagaggtcagagaatccaagtgttag
DBGET
integrated database retrieval system
