Cavia porcellus (domestic guinea pig): 100734056
Help
Entry
100734056 CDS
T07777
Symbol
Chd6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpoc03036
]
100734056 (Chd6)
Chromosome and associated proteins [BR:
cpoc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100734056 (Chd6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
ResIII
HTH_CHD1_Hrp3
DEAD
HDA2-3
MUN
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
100734056
NCBI-ProteinID:
XP_003467708
Ensembl:
ENSCPOG00000015641
UniProt:
H0VTU5
LinkDB
All DBs
Position
Unknown
AA seq
2716 aa
AA seq
DB search
MKMKIQKKEKQLSNLKVLNHSPMSDASVNFDYKSPSPFDCSTDQEEKIEDVARHCLPQQD
LYTTEEEADTLFPRKVTSCNGMEDSGGGGTGVKKKRKKKEPGEQEGAAKGNKDREPKPKR
KREPKEPKEPRKTKELKKAKEPKEPKQKEGAKKTRKPREASGTKEAKEKRCNADSAARTK
SKKASKEQGPTPVERKKKGKRKSETTVESLELDQGLPNPSLRSPEESTESADSQKRRSGR
QVKRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILAS
KTIQEVHPGEPPFDLELFYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKH
IFTEPDEDLFNPDYVEVDRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDP
AKVKEFESLQVLPEIKHVERPASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRK
NCILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYH
GSQISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEA
HRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPTQFPSETAFLEEFG
DLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFS
FLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPDAPDFQLQAMIQ
AAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQA
AIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSK
AVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKCGTNGVQQLSKMEVEDLLRKGA
YGALMDEEDEGSKFCEEDIDQILQRRTHTITIQSEGKGSTFAKASFVASGNRTDISLDDP
NFWQKWAKIAELDTEAKNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPT
RSRRLNDKARRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVY
CVKHYKGDEKIKSFIWELITPTKDGQAQTLQNHSGLSAPVPRGRKGKKMKNQLLLPELKN
ADWLTTCNPEVVLHDDGYKKHLKQHCNKVLLRVRMLYYLKAEILGEAADKAFEGTPAREL
DVPLPDIDYVEIPVDWWDAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKSL
SAEQSSTDGTSDIPERGTTDKEDNAEDKLDGLQKQMENSSDGGEGLCGEKKDDSRPAQDS
SDPDKSPWPVSSALTARLRRLVTIYQRCNRKELCRPEILGPGNQGYWVQEEVFRRTSEMD
LINKEAQKRWTRREQADFYRAVSSFGVVYDQEKKTFDWTQFRIISRLDKKSDESLEHYFY
NFVAMCRNVCRLPAWKDGGPPDATIYVEPITEERAARTLYRIELLRKVREQVLRCPQLHE
RLQLCRPSLYLPVWWECGKHDRDLLIGTAKHGLNRTDYYIMNDPQLSFLDAYRNYAQHKR
TDTQAPGGLCCLYQTNSKLYESLAYSQMSRTSESLESEPENLVKIESRDDHLGLRGGSFP
DVTCDNFISKVQGVISINHDESLLPESLENMMFGKVLSQEPGSFQEGPIINAESRKDAIG
ISANRSASCRPSDREAEIASVSLMDTLEAGVAQMNIKSGEPVLTPISKEREHCCDEAGQR
PGSMGQLEAKSIPSTALDVGNESGFVDMCSLSVCDSKRNLSSDQKLMDLLENKSLESKLI
LSQNQSDEEEEEDENEGETLTVAAGTREKPEVLHLANPTANIPREKSHGFHLDEAKKGSL
EVVSQTGPPRAFPPASCQCHCKHMERWAHGLGSDEFEVEKPKAYKPDLYKSKANNTTVEG
EPTAIPSEPFKVKPELLKEPWKESAERKKGFSTYASEGSEPKSEDMDFENKDDYERDGTC
HSQDYPGKYSEEESKSSASGIAGDLGDDLQEARAPTIAQLLQEKTLYSFSEWPKDRVIIN
RLDSICHVVLKGKWPSSQQYEPSGTLSTAVLANSAGSRNSLSEPEAAEHSFSNGATLAAQ
VQKESFLAPVFTKDEQKHRRPYEFEVERDAKARSLEQFSATHGHPPIVLNGWHGESAIDL
SCSSEGSPGATSPFPVSANTPKIGAIGSLQGALGMDLSGILQAGLIHPVTGQIVNGSLRR
DDAAMRRRRGRRKHVEGGMDLIFLKEQTLQAGILEVHEDPGQATLSTTHPEGPGPATSAP
EPTAAANGQAEKAIPSKSLLDWLRQQADYSLDVPGFGANFSDKPKLRRPRCNEPGKLDIS
SLSGEERVPAVPKEPGLRGFLPENKFNHTLAEPVLRDAGPRRRGRRPRSELLKAPAIVAD
SPSGMGPLFMNGLIAGMDLVGLQNVRNMPGIPLTGLVGFPAGFATMPTGEEVKSTLSMLP
MMLPGMATVPQMFGVGGLLNAPMAATCTSTAPASLSSTTKGGIAAAEKTTEDKPSSPDEK
ADTLAEDKPGPSPFSDQSEPAITTSSPVAFNPFLIPGVSPGLIYPSMFLSPGMGMALPAM
QQARHSEIAGLESQKRKKKKTKGDNPNPNPEPAPGHEREPGTDQNCTESSTPLPPEREHV
AQSGEGGLKDANSDTN
NT seq
8151 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgaaaatacagaagaaagaaaagcagttgtcaaatttaaaagttttgaatcac
tccccaatgtctgatgcctctgtcaattttgactacaaatccccatccccgtttgactgc
agcactgatcaggaagagaaaattgaagatgttgccagacactgtctgccacagcaggat
ctatacactactgaagaagaagctgatacccttttccctaggaaagtgacatcctgcaat
gggatggaggacagtggaggcggaggtactggagtaaagaagaaacggaagaaaaaggaa
ccaggagagcaagagggtgcagcaaagggaaacaaggacagggagcccaagccaaagagg
aagcgagaacctaaagagccaaaggaacccaggaagaccaaggagctgaagaaggccaag
gaacccaaggagcccaagcagaaagagggagcaaagaagacgaggaagccacgagaggcc
tctggtaccaaggaggccaaagagaagagatgcaatgctgattctgcagccaggacaaag
tccaagaaggccagcaaggagcaaggaccaaccccagtggagagaaagaagaaaggaaaa
aggaaaagtgaaacaacagtggagagtttagagctggatcagggcctgccgaacccatcc
ctgcggagtcccgaggagtccactgagtctgctgatagccagaaacgacgctcaggtcga
caagtaaaacgcagaaaatacaatgaggacctcgactttaaagtggtggatgatgatggg
gaaacaattgctgttcttggagctggccgaacatctgcgctctcagcttctacactggcg
tggcaggcagaggagccaccagaagatgatgcaaacatcattgagaagatattggcatct
aagaccattcaagaggttcacccaggagaacctccatttgacctagagctattctacgtt
aagtatagaaatttttcctacttacattgtaaatgggctacaatggaagagctggaaaag
gatcctcgcattgcacagaagatcaagcgatttagaaacaaacaagcacagatgaagcac
atttttactgagcctgatgaagatttgttcaacccagactacgtagaagtcgatcgcatc
ttagaagtggcccacactaaggatgcagaaacaggggaggaagtaacacactacctggtg
aagtggtgttccctgccatatgaagaaagcacgtgggagctagaggaagatgtggatcct
gcaaaagttaaggaatttgagtctctgcaggttctgcctgaaattaagcatgtggagcgg
cctgcttcagactcctggcagaaacttgaaaagtcccgcgagtataagaacagtaaccag
ctccgagagtaccagttggagggaatgaactggcttctttttaattggtataacaggaaa
aactgtattttggctgatgagatgggcctagggaaaaccattcagtccatcacattcctt
tcagaaatattcctcagggggatccatggtccttttctcatcattgcacctctctctact
atcaccaactgggagagggagttccggacatggacagagatgaatgccattgtgtaccac
ggcagccagatcagcaggcaaatgatccagcagtatgagatggtgtacagggatgcacag
ggaaatcctctttcaggagtcttcaagttccatgttgtcatcacaacatttgagatgatc
ctggcagattgcccagagttgaagaagattcactggagctgtgtgataattgatgaggcc
cacagattgaagaataggaattgtaaacttctagaagggttaaagcttatggccttggaa
cataaagtgctactcactgggacacccttacaaaactctgtggaagagctcttcagtttg
ctaaattttttggagccaacacaatttccttcagagactgcattcttggaggagtttgga
gatctgaaaacagaggagcaggtaaagaaactacagtctatcctaaaaccaatgatgctt
cgacgcctgaaagatgatgtggaaaagaaccttgctcccaaacaagagaccatcattgaa
gtagaactgaccaatatccagaaaaagtactaccgtgctatcctggagaaaaatttttcc
tttctgactaagggggcaaatcagcacaacatgcccaatctcatcaacaccatgatggag
ctgagaaagtgctgtaaccatccctacttgatcaatggggcagaggaaaaaattctggaa
gatttcagaaaaactcacagccctgatgctcctgactttcagctgcaggccatgattcag
gcagcagggaagctggtgctgattgataaactgcttcctaagctgattgcaggtggccac
aaagtgctcatcttctcccagatggtgcgctgccttgatatcctcgaagattatctcatc
cagagaagatacacctatgagcgaattgatgggcgagtacggggaaacctgcgccaggca
gccatcgaccgattctgtaagccagactcagaccgctttgtctttcttctgtgcaccaga
gcgggaggcctggggatcaatctcacagctgctgatacctgcatcatatttgattctgac
tggaacccacaaaatgacttgcaggctcaggcccgatgtcaccgtataggccagagcaaa
gctgtgaaggtgtatcgcctcatcactcggaactcctatgagcgggaaatgtttgacaag
gccagcctaaagctgggcctggacaaggctgtccttcaggacatcaaccgaaagtgtggc
accaatggagtacagcagctctcaaaaatggaggtggaggatttgctccggaaaggtgct
tatggagccttaatggatgaggaggatgaaggttccaagttctgtgaagaagatatagac
cagattctgcaaaggagaacccacaccatcactatccagtccgaaggaaaagggtccact
tttgccaaggctagttttgtggcttcaggaaaccggacagatatttccttagatgaccct
aacttttggcagaaatgggctaaaattgctgaactggacactgaagcaaagaatgaaaag
gaaagcttagtgattgatcggcctcgtgtaagaaagcagaccaaacactacaactcgttt
gaggaagatgagcttatggagttttcagagttagacagtgactcagatgaacgacccaca
agatccagacgactcaatgacaaagccaggcgctacctccgagctgagtgcttccgagta
gaaaagaacctgctcatctttggctggggccgctggaaggacatcctgactcatggacga
ttcaagtggcacctgaatgagaaggacatggaaatgatttgccgggccttactggtgtac
tgtgtcaaacattataagggagacgagaagattaagagtttcatttgggaactaatcaca
cctaccaaagatggacaggcccagactctccagaaccactcagggctgtctgccccagtc
cctagaggaaggaaaggaaagaagatgaagaaccagctactgctcccagaactaaaaaat
gcagactggctaacgacctgcaaccctgaagtggtcttgcatgatgatggctacaagaaa
cacctcaagcagcactgtaataaagtccttttgcgagtccgaatgctgtactacctaaaa
gctgaaatactgggcgaagcagctgataaagcatttgagggaactcctgccagggaactg
gatgtgcctctgcctgacattgactacgtggagatcccagtggattggtgggatgctgag
gctgataagtcccttctcattggcgttttcaagcatggttatgagaggtacaatgccatg
cgagcagacccagccctctgcttcctggagaaagttggaatgccagatgagaaatccctt
tcagcagaacagagcagtacagatgggacatcagacattcctgaaagaggcaccacggat
aaagaagacaatgctgaagacaaattagatggcctccagaaacaaatggagaattccagt
gatggcggtgaaggcttatgtggtgagaagaaagacgacagccggccagcccaggatagc
tccgacccagacaaatcaccctggccggtttcatcagctctgacagctcgtctccggcgt
ctggtcactatttaccagcgctgcaatcgtaaagagctctgccgacccgaaatcctggga
ccaggtaaccaaggatactgggtccaggaggaggtgttcaggagaacctcagaaatggac
ctcatcaacaaggaagctcagaagaggtggaccaggagagagcaagcagacttctataga
gcagtgtcttcatttggcgttgtttatgaccaagagaagaaaaccttcgactggacccag
ttccgcatcatttcccgtctggacaagaagtcagatgagagcctggaacactatttttat
aattttgtggccatgtgccgaaacgtctgtcgtctgcctgcgtggaaagatggtggtccc
ccagatgctaccatctacgttgagcccatcactgaggaacgggctgcaagaactctttac
cgcatcgagttgttacggaaagtccgagagcaggtactcaggtgtcctcaactgcatgag
cgcctccaactctgcaggcccagcctctaccttccagtctggtgggagtgtgggaaacat
gatcgagacctgctcatcggtacagctaaacacgggctgaaccgaactgactattacatc
atgaatgacccccagctatccttcctggatgcctacagaaactatgcccagcataaaaga
actgacactcaggcaccaggtggtctctgttgtctctaccagaccaactccaagttatat
gaatctcttgcctattctcaaatgagtaggacttcagagtctcttgaaagtgaacctgag
aatctggtgaaaattgaaagcagagatgatcatcttggtttgcgtggaggcagcttccct
gatgtgacttgtgacaattttatttctaaagttcagggtgtaatttctatcaaccacgat
gaaagtctgctgcctgagtccttggagaatatgatgtttggtaaggtactcagccaagag
ccaggctcttttcaggagggcccaattatcaatgcagaatccagaaaagatgctattggt
atctcagcaaacagaagtgcaagctgccggcccagtgaccgtgaagcagaaatagcttca
gtttctcttatggataccttagaagcaggagtagctcaaatgaacattaaaagtggagaa
cctgtgttgacacctatttcaaaggaaagggagcactgctgcgacgaggcagggcagaga
cctggaagcatggggcagctagaagccaaaagcataccttccactgccttggatgtggga
aatgaaagtgggtttgtagatatgtgcagtcttagtgtctgtgactccaaaagaaacctc
tcatcagatcagaaattaatggatttattagaaaacaaaagtttagaaagtaagttgatt
ttgagtcaaaaccagagtgatgaggaagaggaagaggatgaaaatgagggagaaacttta
accgtggcagcaggcacaagagaaaagccagaggttttacatctcgctaatcccactgct
aacatcccaagggaaaagagtcacggcttccatctggacgaagccaagaaaggaagcctg
gaggtggtgagccaaactggaccgccgagggcctttcctccagcatcctgccagtgccac
tgcaaacacatggaaaggtgggcgcatggcctcgggagtgatgaatttgaagtggagaaa
cccaaggcttataagccagacctgtataaaagcaaagccaataataccacagtggaaggt
gagcccactgctattccatcagagccatttaaagtaaaacctgagcttttgaaagaaccc
tggaaagaaagtgcagaaaggaaaaaaggtttttccacatacgcttctgaaggaagtgag
cccaagtcagaagacatggatttcgagaataaagatgattatgagagagatgggacctgc
catagtcaagactacccagggaaatattctgaagaggagagcaagagctcagcatcaggt
attgccggagaccttggggatgacctacaagaggctcgcgctcccaccattgctcagctg
ctacaggagaaaaccctctattccttctcagagtggccaaaggatcgcgtgataattaac
cgcctagatagcatctgccacgtggtgttaaaggggaagtggccttctagccaacagtat
gaaccctcaggcacactgtccactgcagtcttagccaacagtgctggttctcggaacagt
ctctcagagccagaagcggcagaacacagcttcagcaatggtgcgacgttggcagctcag
gtgcagaaggagagcttcttagccccagtattcacaaaagatgaacaaaagcacagacgt
ccctatgagtttgaggtggagagggatgccaaggctcggagcctagaacagttctctgcc
acccacgggcacccccccatcgtcctcaatggctggcatggggaatcagctatagacctc
tcctgctcatcagaggggtccccaggagccacatcccctttcccagtgagtgccaacacc
cctaagattggggctatcggttcacttcaaggagcccttggcatggacttgtctgggatt
ctgcaagctggtctgatccacccagtgactggacagattgtcaacggaagcctcagaaga
gatgatgctgcgatgaggaggcggaggggaagacgaaaacatgttgaaggagggatggac
ctcatctttttgaaggagcaaacacttcaggcaggaatcttggaagtccatgaagaccca
ggacaggccactttgagcactacacaccctgaaggcccaggacctgctacctcggcccct
gagccaacagcagcagccaacggccaggccgagaaagccattccaagcaagagcctgctt
gactggctacggcagcaggctgattactccttagatgttcctggctttggggcaaatttt
tcagacaaaccaaagctgaggaggccacgctgtaatgaacctggaaaattagacatcagc
tctctgagtggagaagagagggttcctgctgtccccaaggaaccaggactgaggggattt
ctcccagaaaacaagttcaatcacaccctggctgagcctgtacttcgggatgcaggcccc
cgcaggagggggaggcggcctcggagtgaactcctgaaagctccagccattgtagcagac
tctccctctggaatggggcctctattcatgaatgggttgattgcaggaatggacctggtg
ggactgcagaacgtgagaaatatgccaggtatccctctcaccgggctggtgggcttccca
gctggctttgcaaccatgcctactggcgaagaggtgaaaagcaccctgagcatgctgccc
atgatgctgccaggcatggccacagtgccccagatgttcggtgttggaggcctcctcaat
gctcccatggcagccacctgcacgtccactgctccagcgtctctgtcaagcacaacaaaa
ggtggtatagcagccgctgaaaagactacagaggacaaacccagcagccctgatgaaaaa
gcagacacattagctgaagacaagcctggtcctagtccattttctgatcaatctgaacct
gcaataactactagtagccctgtggcttttaacccatttctcatcccaggagtgtctcct
ggactcatttacccatccatgtttctctcccccggtatgggcatggctctgccagccatg
cagcaggccagacactctgagatagctggtctggagagccagaagaggaagaagaagaaa
acaaagggggacaacccaaaccccaacccagagcctgctcctgggcacgaaagggagcca
ggcactgatcagaactgcaccgaatcgagtacccctttacccccagagagagaacatgtg
gcacagtctggagaagggggactcaaggacgccaacagtgacaccaattag
DBGET
integrated database retrieval system
