Cavia porcellus (domestic guinea pig): 100734330
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Entry
100734330 CDS
T07777
Symbol
Ctr9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpoc03021
]
100734330 (Ctr9)
Transcription machinery [BR:
cpoc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
100734330 (Ctr9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_19
TPR_2
TPR_14
TPR_8
TPR_16
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_11
TPR_7
TPR_6
ARM_TT21_5th
TPR_Slam
ARM_TT21_4th
TPR_9
ANAPC3
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
100734330
NCBI-ProteinID:
XP_003465746
Ensembl:
ENSCPOG00000009018
UniProt:
H0VDN6
LinkDB
All DBs
Position
Unknown
AA seq
1173 aa
AA seq
DB search
MSRGSIEISLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEEF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAV
LELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENA
SQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDR
AKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSD
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHK
GYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVV
LYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVL
NAVKELELAHRSFSYLSKVGDKMRFDLALAATEARQCSDLLSQAQYHVARARKQDEEERE
LRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQRAQYVEKTKNILMFTGETEATKE
KKRGGGGRRSKKGEFDEFVNDDTDDDLPMSKKKKRRKGSGSEPEGEDEEGGERRKKKRRR
PPKGEEGSDDDEAENGPKLKKRRPLKTEKKKAPKPERLPPSMKGKIKSKAIISSSDDSSD
EDKLKIADEGHPRHSNSNSDSEEDERRSKRRASSESDSDDNQNKSGSEAGSPPRARRQQS
EEEDSDSDQPARKRRLSGSEQSDNESVQSGRSPSAASENDSRPASPSAESERESERGSDN
EGSGQGSGNESEAEGSNNEGSDRGSDRGSDDSD
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggggctccatcgagatttccctccgggacactgacgaggtcattgaacttgat
ttcgatcagttgccggagggggatgaagttattagtattctgaaacaggaacatacacaa
ctgcacatatggattgctttggcgctggaatactacaagcaaggaaaaacagaagagttt
gtaaagttgttggaagcagcccgtatagatggcaatttggattatagagaccatgagaaa
gaccagatgacttgcttggatacactggcagcctattatgtacaacaggctcggaaagaa
aagaacaaagacaataaaaaggatcttattacacaagcaaccttgttgtataccatggct
gataaaattattatgtatgaccagaaccatttgttgggaagagcctgcttctgtctactt
gaaggtgacaaaatggatcaagctgatgcacagtttcattttgtactcaaccagtctcca
aataatattccagcccttcttggtaaagcttgtatttcattcaacaagaaggattacaga
ggagctcttgcttactataaaaaagcattgcgtactaacccaggatgtccagctgaagtt
cgtttaggaatgggtcattgctttgtgaaacttaacaagttggagaaagctcgtctagca
ttcagcagagccttggaacttaattccaaatgtgtaggtgcattggttggactggctgtt
ttagaactcaacaataaagaggccgattccatcaaaaatggtgtccagcttctttccaga
gcatatactattgatcccagtaaccctatggtattgaaccacttggcaaatcactttttc
ttcaaaaaggactacagtaaagttcagcacctggctctccacgccttccacaacactgaa
gtggaggccatgcaagctgaaagctgctaccagctggctcggtcattccatgttcaggaa
gattatgaccaagctttccaatactactatcaagccacacagtttgcctcatcctctttt
gtgctcccattttttggtttgggacaaatgtatatttatagaggtgacaaagagaatgca
tctcagtgctttgagaaggttttgaaagcttatcctaacaattatgaaacaatgaaaatt
cttggttctctctatgctgcatcagaagatcaagaaaaaagagacattgccaagggccat
ttgaagaaggtcacagaacagtatcctgatgatgttgaggcatggattgaactggcacaa
atcttagaacagactgatatacagggtgccctttcagcctacggaacagctacccggatt
cttcaggagaaggtacaagctgacgttccccctgagatcctgaataatgttggtgctctc
cattttagacttggaaacctaggggaggcaaagaaatactttttggcatcactggatcgt
gcaaaggcggaagctgaacacgatgagcattactataatgccatttctgttacgacatcg
tacaatttagccaggctgtacgaggcaatgtgtgaattccacgaagcagaaaaactgtac
aaaaatatcttacgagaacatcccaattatgttgactgttatttgcggctaggagccatg
gccagagataaaggaaacttttatgaggcttcagattggtttaaggaagctcttcagatt
aatcaggatcatccagatgcttggtctttgattggtaatcttcacttggcaaaacaagaa
tggggtccaggccagaagaaatttgagaggatactgaagcagccatccacccagagcgac
acctactccatgctagcccttggcaacgtgtggctccaaactttgcatcagcccactcga
gacagagaaaaggaaaagcgtcatcaagatcgtgccctggccatctacaaacaagttctc
agaaacgatgcgaagaatctgtatgctgctaatggcataggagctgttttggcccacaaa
ggatatttccgtgaagctcgtgatgtatttgcccaagtaagagaagcaacagcagatatc
agcgatgtatggttgaacttagcgcacatctacgtggaacagaagcagtacatcagtgct
gttcagatgtatgaaaactgcctcagaaagttctataagcaccaaaatactgaagttgta
ctctatttggctcgggccctcttcaagtgtggcaaattacaggaatgcaagcagactttg
ctgaaggccagacatgtggcacccagtgatacagttcttatgtttaatgtggccttggtc
ttgcaaagattagctacctctgtcctaaaagatgaaaaaagtaatctgaaggaagtcctt
aatgctgtgaaagaactggaacttgcacacaggtccttcagttacttgagtaaagtggga
gataaaatgagattcgacttggcccttgctgctacagaagccaggcagtgctctgacttg
ctgagccaggcgcagtaccacgtggcccgggcgcgcaagcaggatgaagaagagcgggaa
ctgcgggccaaacaagagcaagaaaaggagctgctgaggcagaagcttcttaaagaacag
gaagagaaacgcctcagagaaaaggaagagcaaaagaaacttttggaacagcgagcccag
tatgtggaaaagaccaaaaacattcttatgtttactggagagactgaagcaacaaaagag
aagaaacgaggcggtggtggacggcgctctaagaaaggtgaatttgatgaatttgtcaat
gatgacactgatgatgacctaccgatgtctaaaaagaagaagaggagaaagggcagtggt
agtgagccagaaggcgaagatgaggagggcggtgagagaaggaagaagaagaggagaagg
cctccaaagggagaagaaggatccgatgatgatgaagcggaaaacggccccaaactgaag
aagcgccgtccactgaagacagagaagaaaaaggctcccaagccagaacgactacctcct
tcaatgaagggaaaaataaaatccaaagccataatatcatcaagtgatgattcttcagat
gaggataaactgaaaattgctgatgaaggacaccccaggcacagcaacagcaacagtgac
tcagaagaggatgagcgacggtccaagagacgggcctcctcggagagcgactcggatgac
aaccagaacaagtccggcagcgaggccggcagccccccgagggcccgcaggcagcagtcc
gaagaggaagactccgacagcgaccagccggcccgcaagaggaggctctcgggctccgag
cagtccgacaacgagtcggtgcagtcggggagaagcccctcggcagcctcggagaacgac
tctcgcccggcgtccccgagcgccgagtcggagcgcgagtccgagcgcgggtctgacaac
gagggctcgggccagggctctggaaacgagtcggaagccgagggatccaacaacgagggc
tctgatcgcggctccgatcgcggctcagatgatagcgactag
DBGET
integrated database retrieval system
