Cavia porcellus (domestic guinea pig): 100734659
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Entry
100734659 CDS
T07777
Symbol
Dcaf1
Name
(RefSeq) LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor 1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
100734659 (Dcaf1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cpoc01001
]
100734659 (Dcaf1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpoc04121
]
100734659 (Dcaf1)
Enzymes [BR:
cpoc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
100734659 (Dcaf1)
Protein kinases [BR:
cpoc01001
]
Serine/threonine kinases: Other
Other
100734659 (Dcaf1)
Ubiquitin system [BR:
cpoc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
100734659 (Dcaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WDR55
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
100734659
NCBI-ProteinID:
XP_013015075
Ensembl:
ENSCPOG00000006180
LinkDB
All DBs
Position
Unknown
AA seq
1482 aa
AA seq
DB search
MTTVVVHVDSKAELTTLLEQWEKEHGSGQDMVPILTRCRADPECMLGHLLRILFKNDDFM
NALVNAYVMTSREPPLNTAACRLLLDIMPGLETAVVFQEKEGIVENLFKWAREADQPLRT
YSTGLLGGAMENQDIAANYRDENSQLVAIVLRRLRELQLQEVALRQESKRPSPRKLSSEP
LLPLDEEAVDMDYGDMAVDVVDGEQEEASGDMEISFHLDSSHKTSSRVNSATKPEEGGLK
KHKSAKQGDRESFRKAKQKLGFSSTDPDRMFVELSNSSWSEMSPWVIGTNYTLYPMTPAI
EQRLILQYLTPLGEYQELLPIFMQLGSRELMMFYIDLKQTNDVLLTFEALKHLASLLLHN
KFATEFVAHGGVQKLLEIPRPSMAATGVSMCLYYLSYNQDAMERVCMHPHNVLSDVVNYT
LWLMECSHASGCCHATMFFSICFSFRAVLELFDRYDGLRRLVNLISTLEILNLEDQGALL
SDDEIFASRQTGKHTCMALRKYFEAHLAIKLEQVKQSLQRTEGGILVHPQPPYKACSYTH
EQIVEMMEFLIEYGPAQLYWEPAEVFLKLSCVQLLLQLISIACNWKTYYARNDTVRFALD
VLAILTVVPKIQLQLAESVDVLDEAGSTVSTVGISIILGVAEGEFFIHDAEIQKSALQII
INCVCGPDNRISSIGKFISGTPRRKLPQTPKSSEHTLAKMWNVVQSNNGIKVLLSLLSIK
MPITDADQIRALACKALVGLSRSSTVRQIISKLPLFSSCQIQQLMKEPVLQDKRSDHVKF
CKYAAELIERVSGKPLLIGTDVSLARLQKADVVAQSRISFPEKELLLLIRNHLISKGLGE
TATVLTKEADLPMTAASHSSAFTPVTAAASPVSLPRTPRIANGIATRLGSHAAVGASAPS
APTTHPQPRPPQSSLALPGPSYAGNSPLIGRISFIRERPSPCNGRKIRVLRQKSDHGAYS
QSPAIKKQLDRHLPSPPTLDSIITEYLREQHARCKNPVATCPPFSLFTPHQCPEPKQRRQ
APINFTSRLNRRASFPKYGGVDGGCFDRHLIFSRFRPISVFREANEDESGFTCCAFSARE
RFLMLGTCTGQLKLYNVFSGQEEASYNCHNSAITHLEPSRDGSLLLTSATWSQPLSALWG
MKSVFDMKHSFTEDHYVEFSKHSQDRVIGTKGDIAHIYDIQTGNKLLTLFNPDLANNYKR
NCATFNPTDDLVLNDGVLWDVRSAQAIHKFDKFNMNISGVFHPNGLEIIINTEIWDLRTF
HLLHTVPALDQCRVVFNHTGTVMYGAMLQADDEDDLMEERMKSPFGSSFRTFNATDYKPI
ATIDVKRNIFDLCTDTKDCYLAVIENQGSMDALNMDTVCRLYEVGRQRFAEDEDEEEDQE
EEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGDNDFSPSDEELANLL
EEGEDGEDEDSDADEEVELILGDTDSSDNSDLEDDIILSLNE
NT seq
4449 nt
NT seq
+upstream
nt +downstream
nt
atgactacagtagtggtacatgtggactccaaagctgagctcactaccctgctggagcag
tgggaaaaggaacatggtagtgggcaggacatggtacctatccttaccaggtgtcgagct
gatccagagtgtatgctgggccacttgctgagaatactcttcaagaatgatgatttcatg
aatgcactggtgaatgcatatgtgatgacaagccgggagccacctttgaacactgcagct
tgcagactgctactggacatcatgccagggctggaaactgctgttgtttttcaagaaaag
gaaggaattgttgagaatcttttcaaatgggcccgagaggctgatcagccactgaggaca
tattctactggactgttgggaggtgctatggaaaatcaagacattgctgccaactacagg
gatgaaaattcacagctggtggcaatagtgcttcgaagactgagggaactacagcttcag
gaagtggctttgcggcaagaaagcaagcgtcctagcccacggaagctttcttctgaaccc
cttttgcctttggatgaggaagctgtggatatggactatggtgacatggcagtagatgta
gtggatggagaacaggaagaagcttctggagacatggaaatctcgtttcatcttgattcc
agccacaagaccagtagtagagtaaactcagcaaccaaacctgaggaaggaggattaaag
aaacacaagtcagcaaaacagggtgacagagagagctttaggaaagctaaacaaaagttg
ggtttctcatctactgatccagatagaatgtttgttgaactatctaatagcagctggtca
gaaatgtccccctgggtgattggcaccaattataccctttatcccatgactcctgctatt
gagcagagactcattctccagtacttgacccctctaggagaatatcaggagttacttccc
atattcatgcagcttggatcacgggagttgatgatgttctatattgacttgaagcagact
aatgatgtcctgcttacatttgaggcactcaagcacctagcatctctcctgctccataac
aaatttgccacagaatttgttgcacatggaggagtacagaaattactggaaattcctcgt
ccttctatggctgcaactggtgtatctatgtgcttatattacttgtcctacaaccaggat
gctatggaaagagtttgcatgcatccccacaatgttctgtctgatgtggtaaactatacc
ctttggttaatggagtgttctcacgcctcaggatgctgccatgctaccatgtttttctca
atttgcttctcatttcgagctgttttggagctctttgatcgctatgatggtcttcgtcgt
ctggtgaacttgatcagtactttggagattctgaatttggaagatcagggtgcacttctg
agcgatgatgaaatatttgctagccgccaaactgggaaacatacctgcatggccttacgc
aagtattttgaggctcacctggccattaaattagaacaagtgaagcagtcacttcagagg
actgagggtggcattcttgttcatcctcaacccccatataaggcatgttcatatactcat
gaacagattgtggaaatgatggaatttttgatagaatatggccctgcgcagctgtactgg
gaaccagctgaagtcttcctcaaactttcctgtgttcagctcttgttgcagcttatttct
attgcttgcaattggaagacctattatgcaaggaatgacactgtgcgttttgctttggat
gtcctggctattcttactgtggtaccaaaaatacagctccagttggcagaatcagtggat
gtactggatgaggctggctctactgtctcgactgtaggtatcagcattattttgggagtg
gctgagggtgagttctttatccatgatgctgaaattcagaagtcagcgcttcaaattatc
atcaattgtgtatgtggcccagataaccgaatatccagtattggtaaatttatttctgga
actcctcggagaaaactgcctcagactcccaagagcagtgagcacaccctggccaagatg
tggaatgtggtccaatccaataatggcatcaaggtgcttctgtctttactgtccatcaag
atgcccatcacagatgcagaccagatccgggccctggcctgcaaggccttggtgggcttg
tctcgaagtagcactgtcaggcagatcatcagcaaactgccacttttcagcagctgccag
atccagcaactgatgaaggagcctgtgcttcaggacaaacgcagtgaccatgtcaaattc
tgcaaatatgctgctgagcttattgaacgtgtgtctggaaagccgcttcttattggcact
gatgtgtctttggcacgattacagaaagcagatgttgttgctcagtcaaggatctctttc
cctgagaaagaactgcttctgttgatacgaaaccatcttatttctaaagggcttggagag
acagcaaccgtgctgacaaaagaggctgacctgcccatgactgctgcttcccattcttct
gccttcactccagtaactgctgctgcctctcctgtctctcttccccggacccctcgcatt
gctaatggcattgcaactcggctgggtagccatgctgctgtgggtgcctctgccccttct
gcccctactacccaccctcagccacgacccccccagagttcactagctctgcctggtcca
tcttatgcgggcaactcccctttgattggtaggattagttttatcagagagaggccatca
ccctgcaatggcaggaaaatcagagtgttgcggcagaagtcggaccatggtgcctacagc
cagagcccagccataaaaaaacagttggacaggcatcttccttccccacctacactggac
agtatcatcacagaatatcttagagagcaacatgctcgctgcaagaacccagttgctacc
tgcccacctttttccctctttactcctcaccagtgtcctgagccaaaacagaggcggcag
gcgccaataaactttacctcaaggctaaaccgcagggcatcatttccaaaatatggaggg
gtggatggcggatgctttgataggcaccttatctttagcagatttcgtcctatttcagtg
ttccgggaagcaaatgaagatgagagtggcttcacctgctgtgcattctcagcacgggaa
cggttcctgatgcttggcacctgcactgggcagctgaagctatataatgtgttcagtgga
caggaagaagccagctataactgtcacaactcggccatcacacaccttgaaccttcaagg
gatggatccttgctgctgacatctgctacttggagccaacctttatctgcactttgggga
atgaaatcagtatttgatatgaagcattccttcactgaagatcactatgttgagttcagt
aagcactctcaggatcgagtcataggcacaaaaggggacattgctcatatttatgatatt
cagactggcaacaagctgttgactctgtttaacccagatcttgccaacaactacaagagg
aactgtgccacctttaatcctacagatgatcttgtcttaaatgatggcgtcctctgggat
gtccgctcagcacaggccatccacaagtttgacaagttcaacatgaacatcagtggagtt
ttccatccaaatggactggagatcatcatcaatactgagatttgggacctccgaactttc
catcttttacacacagttcctgctctagatcagtgtcgtgtggtgttcaaccatacagga
acagtgatgtatggagctatgttgcaggctgatgatgaagatgacttaatggaagaaagg
atgaaaagcccttttgggtcatctttccgaacatttaatgctacggactataaacctatt
gcaaccattgatgtgaagcggaacatctttgacttgtgtacagacaccaaagactgctat
cttgctgtcattgagaatcaaggtagcatggatgctctgaacatggacacggtatgcagg
ctgtatgaagtgggaaggcagcgctttgcagaagatgaagatgaagaggaggaccaggaa
gaggaagaacaggaagaagaggatgatgatgaagatgatgacgacactgatgatttagat
gaacttgacactgaccaattgctggaggcggaactggaggaggatgacaataatgagaac
gcaggagaggatggggacaatgacttctctccctctgatgaagagctagcaaaccttcta
gaggagggagaggatggggaggatgaagattctgatgcagacgaggaagtggaactgatc
ctgggggacactgacagctctgacaactctgatttggaagatgacatcatcttatctctg
aacgagtga
DBGET
integrated database retrieval system
