Cavia porcellus (domestic guinea pig): 100734914
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Entry
100734914 CDS
T07777
Symbol
Smarcad1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
100734914 (Smarcad1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpoc03036
]
100734914 (Smarcad1)
Chromosome and associated proteins [BR:
cpoc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100734914 (Smarcad1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
DEAD
HDA2-3
CUE
TTC3_9th
Motif
Other DBs
NCBI-GeneID:
100734914
NCBI-ProteinID:
XP_003472153
Ensembl:
ENSCPOG00000011398
UniProt:
H0VJ31
LinkDB
All DBs
Position
Unknown
AA seq
1032 aa
AA seq
DB search
MNLFNLDRFRFEKRSKVEEAPEASPQIPQRPQPAQPGPSSPISLSAEEENADGGASRANT
PDSDITEKTEDSSVPETPDNERKASISCFKNEKGIQYIDLSSDSDDVISPNCSSTIQEKN
FNKDTVIIVSEPSEDEESQSLPTMSQRNDGISELEDISALEDLKDAKLQTLKELFPQRSD
ADLLKLIESTTTMDGAIAAALLMFGDAGGGPRKRKLSSSSEPYEEDEFNDDQSFKKTRLD
HGEESNESAESSSNWEKQESIVLKLQKEFPNFDKQELREVLKEHEWIYTEALESLRVFAG
DQDTQFASQSEVPNGKEISSRTQNCPKNAAKTKLKQKFSMKAQNGFNKKRKKNVLNPKKV
TEDSEYDSGSDAGSSLDEDYSSGEEVMEDGYKGKILHFLQGASIGELTLIPQCSQKKAQK
ITELRPFNSWEALFTKMSKTNGLSEDLIWNCKTLIQERDVVIRLMNKCEDISNKLTKQVT
MLTGNGGGWNIEQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIA
FLAYLYQEGNKGPHLIVVPASTIDNWLREVNLWCPTLNVLCYYGSQEERKQIRFNIHNKY
EDYNVIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLL
LTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKPADEQSIYEKERIAHAKQI
IKPFILRRVKEEVLKQLPPKRDQIELCAMSEKQEQLYLGLFNRLKKSINNLEKSTEMCNV
MMQLRKMANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHVLC
KQYRHINNFQLDMDLILDSGKFRALGCLLSELKQKGDRVVLFSQFTMMLDILEVLLKHHQ
HRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPY
NDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVDEGDEGTMPA
DIATLLKTSMGL
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcttcaacttggaccgttttcgcttcgagaaaaggagcaaggtggaggaggcg
cccgaagcgagtccccagatcccccagcgcccccagcccgcccagcccggcccttcctcg
cccatctcgctcagtgcggaagaagagaatgctgacgggggagcgagcagggccaacacc
cccgattcagacattaccgagaaaacagaagattctagtgttccagaaactccagataat
gaaagaaaagcaagcatatcatgtttcaagaatgaaaaagggatacaatatattgatttg
tcttctgatagtgatgatgttatttccccaaattgttccagtacaattcaagagaaaaat
ttcaacaaagacaccgtgattatagtttctgaaccatctgaagatgaagagtcccagagc
cttcctaccatgtcacaaagaaacgatgggatttcagaactggaagacatttctgcacta
gaagatcttaaagatgctaaacttcagactttgaaggaactttttccacaaagaagtgat
gctgatttacttaagttgattgaatcaacgaccactatggatggagccattgctgccgcc
ttgctgatgttcggtgatgcaggtggtgggcccaggaaaagaaaattatcttcttcgtca
gagccgtatgaagaggatgaatttaatgatgatcaatcttttaaaaagacaagattggat
catggagaggaatcaaacgagtctgcagagtctagtagtaattgggaaaagcaggaaagt
attgtattgaaattgcaaaaggagtttcccaatttcgataaacaggaactaagagaagta
ctcaaagaacatgagtggatatacacagaagccttggagtctctgagagtgtttgcagga
gaccaggatacgcagtttgcatcacaaagtgaagttcccaatggaaaagagatttcttca
aggactcaaaattgtcctaaaaatgcagctaaaacaaaactgaaacagaaattttccatg
aaagcacaaaatggatttaacaagaaacgtaaaaaaaatgtgcttaaccctaaaaaagtc
actgaagactctgagtatgactcgggttctgatgccggcagctccctggatgaggactat
agcagtggggaggaagtgatggaggatggctacaaaggtaaaatcctccacttcctgcag
ggtgcctcaattggtgagctcactctgattcctcagtgctcccagaagaaggctcagaag
ataacagaactccggccctttaacagttgggaagctctgttcacaaagatgtccaaaact
aatggcttatcagaagatttgatatggaactgtaagacactgatccaagaaagggatgta
gttataagacttatgaataaatgtgaagacatttcaaataaattgacaaagcaagttacc
atgctcactggaaatggaggtggatggaacatagaacaaccctccattctaaaccaaagt
ttgtcactcaagccctaccagaaagttggtttgaattggctggcattggtacataaacac
ggacttaatggcattttggcagatgaaatgggcctaggcaaaactattcaagccattgca
tttctggcatacctgtatcaggaaggaaataaaggtcctcatctcatcgttgtcccagct
tcaaccatagataactggctaagggaagttaatttatggtgccctactttaaatgttctc
tgttactatggttctcaagaagaacgtaaacaaattagatttaacattcataataaatac
gaagattataatgtgatagtaactacgtataattgtgcaatcagcagttcagatgaccgt
agtctgtttcgacgcctgaaacttaattatgcaatttttgatgagggccatatgctaaag
aatatgggctccatccgctaccagcaccttatgacaattaatgcaaataaccgattactg
ctcacaggaacacctgtgcagaataatctgttagaactcatgtcactgttgaattttgtt
atgccacatatgtttagtagcagtaccagtgaaatacgaagaatgttttcttcaaagact
aaaccagcagatgagcagagtatatatgaaaaggagagaatagcacatgcaaaacaaatt
ataaagccttttattcttagaagagtgaaagaagaggttctcaagcagctgccccccaag
agagatcaaattgaactgtgtgccatgtcagagaagcaggagcagctctacttgggtctt
ttcaacagactaaaaaagtctatcaataacctagaaaaaagtacagaaatgtgcaatgtc
atgatgcaattgagaaaaatggccaatcaccctttattgcatcggcagtattacacagct
gagaaactcaaggaaatgtctcagctcatgctaaaggaacctactcattgtgaggctaat
cctgacctaatctttgaagacatggaagttatgacagactttgaactgcatgtgctctgt
aaacagtaccgacatattaataacttccagttagacatggacttgattttggattctggg
aaattccgagctttaggatgcctcttgtctgaattgaaacagaagggtgacagagttgta
ttattcagtcagtttactatgatgttggatattttagaggttctcctaaaacatcatcag
catcggtatctcagattagatgggaagactcagatctctgaaaggattcatctaattgat
gaatttaacaccgacatggatatttttgtatttctgttgtcaacaaaagctggtggatta
ggaataaatctgacatcagcaaatgttgttatacttcacgatattgattgtaatccttat
aatgacaaacaagcagaagatagatgccatagagtaggccagactaaagaagtactagtt
ataaaattaataagccaagggacaattgaagaatccatgctaaaaattaatcaacagaaa
ttgaaactagaacaagatatgaccactgtggatgaaggtgatgaagggactatgccagca
gatatagccacattactaaagacatcaatgggcctgtga
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