Cavia porcellus (domestic guinea pig): 100735116
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Entry
100735116 CDS
T07777
Symbol
Cstf2t
Name
(RefSeq) cleavage stimulation factor subunit 2 tau variant
KO
K14407
cleavage stimulation factor subunit 2
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100735116 (Cstf2t)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpoc03019
]
100735116 (Cstf2t)
Messenger RNA biogenesis [BR:
cpoc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
100735116 (Cstf2t)
U7-dependent histone pre-mRNA processing factors
100735116 (Cstf2t)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
100735116
NCBI-ProteinID:
XP_013012162
LinkDB
All DBs
Position
Unknown
AA seq
630 aa
AA seq
DB search
MSSLSVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGPAAPIIDSPYGDPID
PEDAPESITRAVASLPPEQMFELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMR
IMDPEIALKILHRKIHVTPLIPGKSQSVSGPGAGPVTVSGPGPGPGPVSVSGPGPVSGPG
PVSGPGPGLCPGPNVLLNQQNPPAPQPQHLARRPVKDIPPLMQTPIQSGIPAPGPIAATV
PGPGPGPGSLTPAGAMQPQVGMPGVGPVPLERGQVQMADPRAPIPRGPMTAAGLPPRGLL
GDAPNDPRGGTLLSVTGEVEPRGYLGPPHQGPPIHHASGHDNRGPSAHDMRGGPIADARL
LMGEPRGPMIDQRGLPMDGRGGRESRGMDTRVMETEVLETRVMERRGMETCAMETRGMEA
RGMDARGLEMRGPGPSSRGPMTGGIQGPGPINIGAGGPQGPRQVPSISGVGNPGGGMQGA
GIQGAGMQGGGMQGASIQGVGMQGASKQGGGQPSSFSPGQSQVTPQDQEKAALIMQVLQL
TADQIAMLPPEQRQSILILKEQIQKSTGAS
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtttgtcagtgagagacccggcaatggatcgatcactgcgttcggtgttcgtg
ggaaacattccgtatgaggcaactgaggagcagttaaaggacattttctcggaggttggt
tccgttgtcagtttccggctcgtgtatgatagagagacgggaaagcccaagggctatggc
ttctgcgagtaccaagaccaggagaccgcgcttagtgccatgcgaaacctcaatgggcgt
gagtttagtgggagagcactgcgggtggacaatgcagccagtgaaaagaataaggaggag
ttaaagagcctagggcctgcagcgcccatcattgactctccttatggggatcccattgat
ccagaagacgcccctgaatcgattaccagagcagtagccagccttcctccagagcagatg
tttgagctgatgaagcagatgaaactctgtgtgcaaaacagtcaccaggaagctcgaaac
atgttgcttcaaaatccgcaattggcttatgcactgttgcaggcacaagtggtcatgaga
atcatggatcctgagatcgccctgaaaattctgcatcgcaagatacatgtcactccactg
atcccaggcaaatctcagtctgtctctggccctggcgctggccctgttactgtctctggc
cctggccctggccctggccctgtttctgtctctgggccaggccctgtttctggccctggc
cctgtttctggtccaggccctgggctttgcccaggacccaatgttctgttgaaccaacag
aatcctccagctcctcagcctcagcatttggcaagaagacctgtgaaagacattcctcct
ttgatgcagactcctatccagagtggaattccagccccggggccaatagcagctaccgtt
cctggacctggacctggacctggttccttaactcctgcaggggcaatgcagccacaagtt
ggaatgccaggagtgggccctgttcctttagagcggggacaagtacaaatggcagatcct
agagctcctatacctcgtggccccatgactgctgctggcctacctcctcgaggactatta
ggagatgctccaaatgacccacgtggaggaactttgctttcagttactggagaagtagaa
ccgagaggttatctgggtccaccccatcagggtcctcccatacaccatgcatctggtcat
gataatcgtggcccttctgcacatgatatgagaggaggaccaatagcagatgccagactg
ctaatgggagagcccagaggacccatgatagatcaaaggggtctacctatggatggtaga
ggaggcagagaatctcgagggatggacactcgagtgatggaaactgaggttttagaaact
cgagtaatggagcgcagaggaatggagacctgtgctatggaaaccagagggatggaagca
agaggcatggatgcaagaggactggaaatgcggggccctggacctagttctagaggccct
atgactggtggaatccagggacctggtcccattaatataggggcaggtggccctcaggga
cctagacaggtcccaagcatatcaggagtggggaatcctggaggtggcatgcagggggca
ggcatacagggagcaggcatgcagggaggaggaatgcagggagcaagcatacaaggggtg
ggcatgcagggggcaagcaagcaaggtggaggccagcctagcagttttagtcctgggcag
agtcaggtaactccacaggatcaagaaaaagcagctttgatcatgcaggttctccaactg
actgcagatcagattgccatgctgcctccagagcaaaggcagagtatcctgattttaaaa
gaacaaatccagaaatccactggagcttcttga
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