Cavia porcellus (domestic guinea pig): 100735220 Help Entry 100735220         CDS       T07777                                  Symbol Tcof1 Name (RefSeq) treacle protein isoform X1   KO K14562   Treacher Collins syndrome protein Organism cpoc  Cavia porcellus (domestic guinea pig) Pathway cpoc03008   Ribosome biogenesis in eukaryotes Brite KEGG Orthology (KO) [BR:cpoc00001]  09120 Genetic Information Processing   09122 Translation    03008 Ribosome biogenesis in eukaryotes     100735220 (Tcof1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03009 Ribosome biogenesis [BR:cpoc03009]     100735220 (Tcof1) Ribosome biogenesis [BR:cpoc03009]  Eukaryotic type   90S particles    Other 90S particles     100735220 (Tcof1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Treacle Motif Other DBs NCBI-GeneID:  100735220 NCBI-ProteinID:  XP_012996498 Ensembl:  ENSCPOG00000002741 LinkDB All DBs Position Unknown AA seq 1604 aa AA seqDB search MAEARKRRELLPLIYQHLLHAGYVRAAREVKEQSGQKSFLAQPFTLLDIYTHWQQTSELG QKRKAEDDAALQAKKTRVSDPLSSSESSDEEEEDEEAEARTAKAAPRPASTNSLARGVDL PSSMKEKAKAQARSTSKTMNSMPHLAPGKAAGHFLSGKSPKKSAQSSGSIILVSETEEEG SIRALGATAIPGTVSADQVDNSSKDSSSSSDETDVEVKSSGKAAQVRPSPAPAKESSANK VAPSPRKVGGLVPQAGGGALTPAGSAKVLKEDPGNSKESESEEEPPSQVKVSEKILPVRA ASASTKGTPGKGATCALPGKVGPVTGQAKVGRPEQEQDSGSSSEEESHSEVEMPAATTAP QAKSAGKTSQVRAATAPAKESPRKGAPPACPGKAGPAATQTQVGRQAEDSVSSSSSEESD SDTETPAPQAPVAKPVQLKPLGKTPQVRAAPAPAKESPRKGVPPAPPAKTGPAATQAQMG KRKRDSDSSSSSEESDSDGETPAPRIPATSPAQAKPSGKNLQVRPASAPTKEPLGKGAAP KPPQKSAPVAIQVKTEMSKEDSDSSDSDESSDSEEEAPAAAPAAQEKPALKTPQAKASPR KSALLTPTSAKGPPVRVGTPAPWKAGTMTSAPAPALPPGTQRPENDSLSSEESEAEGATP AAAVAQTKQQAASAPTKGPAGQGVTPAPPGKTRPTIAAPAGKARPTVTHVRAEAHESSES SEEDSDDSEAAAVMTPPQVKASGKTPQAKASPASTTASAVKGAASAPGKLVTPVAQGKRG PMAKASGGKSPVRAPQNGAIPARGQASVSAVEKAVTAAAQAEKDSESSEESSESEEKVPA QVKPTGKTPASAPAKEPPRKGAPPAPIGKTVPTATQVGRQEENSVSSSSSEESDSDTETP APQAPTTNPAQLKPLGKTPQVRAAPAPGKESPRKGAPPAPPAKTGLAATQAQVGRQEEDS DSSSSSEESDSDGETPAPRIPATSPAQLKPSGKTPQVKAAPTPAKESPRKGVPPAPLGKT GHVGGVKQEDSDSSSGEESDSDRETLAPQTPAQKNITSKTARSSTVTPAPPEKNPEGSSE SSDEELPPSQVIKPPLIFVDPNRSPAGPAVTPAQAQAASAPRKARAPSSTAGSSSSESED EDVIPATQSSAPAVRTDATMPTTSTRTAPRASASEESSRASEDKKQEVAASQVTRKNPAS LPLTQAALKVLAQKEAGSAAGTLPVTQPQSTAVQARVANKLRQTKLSEGQQNTAIPSGCP KAEAPGSSDDSEDSSDDSSENEEDAEGPQKAKSDPRLAGPPLSKRETLVEETTAESSEDE VVAPSQSLLSGYVTPGLTMANNQASKATAGRESNPTISSASRTKDPAGKPAAESQPAGIM SPKPGRKEAASGPTTQKPRKPKKRPASTEASLQALQSSITQRLLGQPWPLSEAQVQASVV KVLTELLEQQRQKATDATKESSRKGQKRKLSGNQAASKAPKSKKKKQLAAGELKEGAASS EKASRTSKGKSKRGKASGDIKEKEKGAPGSGGAMAKPEGELPKVEGGDQNDPKTKKEKKK SSKKRKDKEKKEKKKKAKKASAKDCDSPFQKKKKKKKTTAEPTV NT seq 4815 nt NT seq  +upstreamnt  +downstreamnt atggcagaggccaggaagcggcgggagctgcttcccctgatctaccagcatctgctgcac gcgggctacgtgcgcgcggcgcgggaagtgaaggaacagagcggccagaagagtttcctg gctcagcctttcacccttttggacatctatacacactggcaacaaacctctgaacttggc cagaagcggaaggcagaagacgatgcagcgctgcaagccaagaagactcgcgtgtcagac cccctcagcagctctgagagctcagacgaggaggaggaagacgaagaggcagaagccaga actgccaaagctgccccaagaccagcatctaccaactccttagccaggggagtggatttg ccatcaagcatgaaagaaaaggccaaggcacaggccaggagcaccagcaagaccatgaac tctatgccacacctcgccccggggaaagcagcgggccactttctttctggaaagtcaccc aagaagtcagcacagtcctcaggaagtatcatcctggtctcagaaaccgaggaggaaggc agcatccgggcccttggagccactgccatacctgggaccgtgtcagctgaccaggtggac aactccagcaaggacagctccagctccagcgatgaaacagatgtggaggtcaagtcctca gggaaagcagcccaggtcaggccctcacctgcccctgccaaggagtcttcagcaaataag gtggccccaagccctaggaaagtcgggggcttggtaccccaagccggaggaggtgcgctc accccagctgggagtgccaaagtgctgaaagaggatccagggaacagcaaggagtctgag agtgaggaagagccccccagccaggtgaaggtgtctgagaaaatcctcccagttagagct gcctcagcctctaccaaggggacccctggcaaaggggccacatgtgcactccctgggaag gtggggcccgtaactgggcaagccaaggtggggaggcctgagcaggagcaggactcaggg agcagcagcgaggaggagtctcacagtgaggtggagatgccggctgccacgactgcacct caggcgaagtctgcagggaagacctctcaggtgagagctgccacagcccctgccaaggag tcccccaggaagggcgcccctccagcatgccctgggaaagcagggcctgcagccacccag acccaggtggggaggcaggcggaggactcagtcagcagcagcagcagcgaggagtcagac agtgacacggagacaccagcaccccaggccccagtggcaaagcctgtccagctgaagccc ttggggaagactcctcaggtgagagctgccccagcccctgccaaggagtcccccaggaag ggcgtccctccggcaccccctgcgaagacaggacctgcggccacccaggcccagatgggg aagcggaagagggattcagacagcagcagcagcagcgaggagtcggacagtgacggggaa acaccggcaccccggattccagccaccagccctgcccaggcaaagccctcagggaagaac ctccaagtcagaccagcctcagcccccaccaaggagccgctggggaaaggggctgctcct aagccccctcaaaagtcagcacctgtagctattcaagtcaagactgaaatgtccaaggaa gactcagacagcagcgacagcgacgagtcatctgacagtgaggaggaggcaccagcagcc gctcctgcggctcaggaaaaaccagctctgaaaacacctcaggccaaggcttctcccaga aaaagcgccctcctcaccccaacatctgccaagggcccgccagtacgggtgggtacccca gccccctggaaagcaggtacaatgacttctgcaccagcacccgctctgcctccgggcacg cagaggccagagaatgattctttgagcagtgaggagtcagaggctgagggggccacgcct gcagcagcagtggcacagacaaagcagcaagctgcctcagcacccaccaaggggcccgca gggcagggggttaccccagcgccccctgggaagacaaggcccaccatcgcagcacctgct ggaaaggcgagacctactgtcacccatgtcagagccgaggctcatgaaagctctgagagc agtgaggaggattctgatgacagtgaagcggcagcagtcatgaccccaccacaggtgaaa gcctcagggaaaacccctcaggccaaagctagcccagcttccaccacagcatctgcagtc aaaggggcagcatcagctcctgggaaactggtcactccggttgctcaaggcaaacgcgga cccatggccaaggcaagtggggggaagtcaccagtgagagccccccagaacggtgccatc ccagcaaggggccaggcatctgtgtcagcggtagagaaggcagtgactgcggcagcccag gctgagaaggactcagagagcagcgaggagtcctcagagagcgaggaaaaggtgccagcc caggtgaagcccacaggaaagacccctgcctcagctcctgccaaggagccccccaggaag ggcgccccacctgcacccattgggaagacggtgcctacagccacccaggtggggaggcag gaggagaactcagtcagcagcagcagcagcgaggagtcagacagtgacacagagacacca gcgccccaggccccaacgacaaaccctgcccagctgaagcccttggggaagactcctcag gtgagagctgccccagcccctggcaaggagtctcccaggaagggcgcccctccggcacct cctgcgaagacaggacttgcagccacccaggcccaggtagggaggcaggaagaggactcg gacagcagcagcagcagcgaggagtcagacagtgacggggaaacaccggcaccccggatt ccagccaccagccctgcccagctgaagccctcagggaagactcctcaggtgaaagctgcc ccaacccctgccaaggagtcccccaggaagggcgtccctccggcaccccttggaaagaca ggacatgtgggaggagtcaagcaggaggactcagacagcagcagcggtgaagagtcggac agtgaccgggagacattggcaccccagactccagcccagaaaaacattacctcaaaaact gccagaagcagcaccgtgaccccagctcccccagagaagaaccctgaggggtcctcggag agcagtgacgaggagctgccccccagccaggtgattaaaccccctctgatttttgtcgac cctaatcgtagtccagctggcccggctgtgacccccgcacaagcccaggctgcaagtgcc ccaaggaaggcccgggcccccagcagcactgctgggagctcctcctccgagagcgaggat gaggatgtgatccccgccacgcagtcctctgcacctgctgttagaacagatgcaactatg cccactacctccacaaggacagcccccagagccagcgccagcgaggagtccagtcgggca tcagaagacaagaaacaggaggtggcagcctctcaggtgacaaggaagaacccagcttcc ctcccactgacacaggctgccctgaaggtcctggcccagaaagaggctggcagtgctgca ggaacactgcctgtgacgcagcctcagagcaccgctgtccaggccagagtggccaacaag ctcagacagaccaagctgtctgaaggccagcagaacacagccattccctcgggctgcccc aaagctgaagcccctggaagctcggatgatagtgaggacagcagtgacgactcttcagag aatgaggaggatgctgagggacctcagaaggccaagtcagaccccaggctggcaggtcca cccctctccaagagggagaccttggtggaggagaccacggcagagtccagtgaggatgag gtggtggcaccctcccagtctctcctctcaggttatgtgacacctgggctaaccatggct aataaccaggcttcaaaagccactgctggacgagagtcgaaccccacaatttcctctgct tcaagaactaaagacccagctggaaagccagcagcagagtcccagccagcaggcatcatg tctcctaaaccaggtcggaaagaggctgcctcaggccccacaactcagaagccccggaag cccaagaagaggcctgcgagcaccgaagcctccctgcaggcactgcagagcagcatcacc cagcgtctcctgggccagccctggcccctgagcgaggcacaggtccaggcttccgtggtc aaggtcctgactgagctgctggagcagcaaaggcagaaagccacagacgccaccaaggag agcagcagaaagggccagaagcggaagctgtcggggaaccaagcagcctccaaagctccc aagagcaagaagaagaagcagctggcggctggggaactcaaggagggtgctgcttcctca gaaaaggcctcgaggacttccaaggggaaatcaaagcgaggcaaagccagtggcgacatc aaggagaaggagaagggagctcctggctctggaggggccatggccaagcctgaaggggag cttccaaaggtggagggtggagatcagaatgaccccaaaaccaagaaagagaagaagaaa tccagtaagaaaagaaaagacaaagaaaaaaaggaaaagaagaagaaagcaaaaaaggcc tcagctaaagactgtgactcaccattccaaaagaaaaagaagaaaaagaagacgacggcc gagccaacagtgtga

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