Cavia porcellus (domestic guinea pig): 100735420
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Entry
100735420 CDS
T07777
Symbol
Hcfc1
Name
(RefSeq) LOW QUALITY PROTEIN: host cell factor 1
KO
K14966
host cell factor 1
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03083
Polycomb repressive complex
cpoc04980
Cobalamin transport and metabolism
cpoc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
100735420 (Hcfc1)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
100735420 (Hcfc1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100735420 (Hcfc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cpoc01009
]
100735420 (Hcfc1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpoc03036
]
100735420 (Hcfc1)
03029 Mitochondrial biogenesis [BR:
cpoc03029
]
100735420 (Hcfc1)
Protein phosphatases and associated proteins [BR:
cpoc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100735420 (Hcfc1)
Chromosome and associated proteins [BR:
cpoc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
100735420 (Hcfc1)
HMT complexes
COMPASS/SET1 complex
100735420 (Hcfc1)
MLL-HCF complex
100735420 (Hcfc1)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
100735420 (Hcfc1)
Mitochondrial biogenesis [BR:
cpoc03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
100735420 (Hcfc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_4
Kelch_1
Kelch_6
Kelch_2
fn3
Motif
Other DBs
NCBI-GeneID:
100735420
NCBI-ProteinID:
XP_003462226
LinkDB
All DBs
Position
Unknown
AA seq
2138 aa
AA seq
DB search
MASAVPPAGSPAVLLQPRWKRVVGWSGPVPRPRHGHRAVAIKELIVVFGGGNEGIVDELH
VYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEW
KRLKAKTPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYILELRQ
GSGVVAWDIPITYGVLPPPRESHTAVVYTERDNKKSKLVIYGGMSGCRLGDLWTLDIETL
TWNKPSLSGVAPLPRSLHSATTIGNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACLN
LDTMAWETILMDTLEDNIPRARAGHCAVAINTRLYIWSGRDGYRKAWNNQVCCNDLWXQE
TXKPPSPARVQLVRANTNSLEVSWGAVATADSYLLQLQKYDIPATAATATSPTPNPVPSV
PANPPKSPAPAAAAPAVQPLTQVGITLLPQTAAAPPTTTTIQVLPTVPGSSIAVPTAART
QGVPAVLKVTGPQATAGTPLVTMRPASQAGKAPVTVTSLPAGVRMVVPTQSAQGTVIGSN
PQMSGMAALAAAAAATQKIPPSSAPTVLSVPAGTTIVKTVAVTPGSTTLPATVKVASSPV
MVSNPATRMLKTAAAQVGTSVSSAANTSTRPIITVHKSGTVTVAQQAQVVTTVVGGVTKT
ITLVKSPISVPGGSALISNLGKVMSVVQTKPVQTSAVTGQASTGPVTQIIQTKGPLPAGT
ILKLVTSADGKPTTIITTTQASGAGTKPTILGISSVSPSTTKPGTTTIIKTIPMSAIITQ
AGATGVTSSPGIKSPITIITTKVMTSGTGAPAKIITAVPKIATGHGQQGVTQVVLKGAPG
QPGTILRTVPMGGVRLVTPVTVSAVKPAVTTLVVKGTTGVTTLGTVTGTVSTSLAGAGGH
STSASLATPITTLGTIATLSSQVINPTAITVSAAQTTLTAAGGLTTPTITMQPVSQPTQV
TLITAPSGVEAQPVHDLPVSILASPTTEQPTATVTIADSGQGDVQPGTVTLVCSNPPCET
HETGTTNTATTTVVANLGGHPQPTQVQFVCDRQEATASLVSSTVGQQNGSVVRVCSNPPC
ETHETGTTNTATTATSNMAGQRGCSNPPCETHETGTTSTATTAMASMGAGQQRDARRVSG
APAVVRISVAPGVPEGAQGSAKPQCQTRQTGTTSTTMTVMASGTPCAGGLGPAFMQLAPL
SSKDVLLGHQLEVQHPHTASTPSGELGMARRVPAPAYEGLPAGSPVTAVTVTALEASLCP
SAAVTQVCSNPPCETHETGTTNTATTSNAGSAQRVCTNPPCETHETGTTHTATTAAANGA
AGQLEGGQQPSASRPCETHQTTSTGTTMSVGVGALPPAPGPSRRTLESSLEAPAMPSTTS
QAGPALLVPFPPQRVCSNPPCETHETGTTHTATTVTSNMTSNQDPPPAAGDQEEAESTQG
DSGNMAGSSTITTTMSSTLPRAVTTVTQSTPVPGPSVPPPEELQVSPGPRQQLPPRQLLQ
TAPAPLMGEPAEVLAAAQPAELQAAVDLSSTGDPSSGQEPPSSAVVATVVVQPPQPTQSE
VEQLSLPQELMAEAQAGTTTLMVTGLTPEELAVTAAAEAAAQAAATEEAQALAIQAVLQA
AQQAVMGTGEPMDTSEAAAAVTQAELGHLSAEGQEGQATTIPIVLTQQELAALVQQQQLQ
EAQAQAQQQHHLPTEALAPADSLNDPAIEGNCLNELAGAVPNTVALLPPTATESLAPSST
FVAPQPVVVASPAKLQAAATLTEVANGIESLGVKADLPPPPSKAPVKKENQWFDVGVIKG
TNVMVTHYFLPPDDAVPTDDDSGTVPDYTQLKKQELQPGTAYKFRVAGINACGRGPFSEI
SAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKIIEYSVYLAIQSSQAGGEPKG
AAPAQLAFMRVYCGPSPSCLVQSSSLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWL
QETSKDSSGSKPASKRPMSSPENVGGQPGAGGGGFQAAGHSPVPTLLSLPSAPQEICSKK
VESARPVKTLVAPKRRPALQARRPSAPLRYALLRKHMAAWSPPARCPLSHRPAARAHLGG
RARSLPGGPAARSPVPARPGRQRPPLLRRGARAERGLP
NT seq
6417 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggccgtgccgcccgccggctccccggctgtgctcctgcagccccgctggaag
cgggtcgtgggctggtcgggccccgtgccccggccccgccacggccaccgcgccgtggcc
atcaaggaactcatcgtggtgttcggcggcggcaacgagggcatcgtggacgagctgcac
gtgtacaacacggccaccaaccagtggttcatcccggctgtgagaggggacatccccccg
ggctgtgcggcctacggcttcgtgtgcgacggcacgcgcctgctggtgttcggcggcatg
gtagagtacgggaagtacagcaatgacctctacgagctgcaggcaagtcgctgggagtgg
aagaggctcaaagccaagacgcccaagaatggacccccgccgtgtcctcgcctcgggcat
agcttctctcttgtgggcaacaagtgctacctgttcgggggtctggccaatgacagcgag
gaccccaaaaacaacattccgaggtacctgaacgacttatacatcctggagctgcgccag
ggctctggggtggtggcctgggacatccccatcacttatggggtcctgcccccaccccgg
gagtcccacaccgctgtggtctacaccgagagggacaacaagaagtccaagttggtcatc
tacgggggcatgagtggctgccggctgggggacctctggaccctggacattgagacactg
acatggaacaagccgagcctcagtggcgtggccccactcccacgtagcctgcactcagcg
actaccatcggaaacaagatgtacgtgtttggcggctgggtgcccctggtcatggacgat
gtcaaggtcgctacgcatgagaaggagtggaagtgtaccaataccttggcctgtctcaat
ctggacaccatggcctgggagaccatcttgatggacacgctggaggacaacattccgcga
gcccgagctggccactgcgctgttgccatcaacacccgcctgtacatctggagcgggcgt
gatggctaccgcaaggcctggaacaaccaggtctgctgcaacgatctctggtaacaggag
acataaaaacccccttccccggcccgcgtccagctggtacgtgccaataccaactctctg
gaggtgagctggggggcggtggcaacggccgacagttaccttctgcagctccagaaatac
gacattcctgccacggctgctactgccacctcccccacccccaacccagtcccgtccgta
cctgccaaccctcccaagagccctgccccagcggcggccgcgcctgccgtgcagccacta
actcaggtgggcatcacgctgctgccccagactgctgcggcgccgccaaccaccacgacc
attcaggtcttgccgacggtgccgggcagctccattgccgtgcccaccgcagccaggact
cagggtgtccctgctgttctcaaagtgaccggtcctcaggctactgcaggaaccccattg
gtcaccatgcgacctgctagccaggctgggaaagctcctgtcaccgtgacctccctgcct
gccggtgtgcggatggttgtgcccacccagagtgcgcaggggacggtgattggcagtaac
ccgcagatgagcgggatggctgcgctcgccgccgccgccgctgccacccagaagatccct
ccttcctcggcgcccactgtgctgagcgtcccggcaggcaccaccattgtgaagaccgtg
gctgtgacaccgggctccaccactcttccagccactgtgaaggtggcctcttcccctgtc
atggtgagcaatccagctacacgcatgctgaagactgcagccgcccaggtggggacatcg
gtctcgtctgccgccaacacgtccacccgccctataatcacggtgcataagtcggggacc
gtgacagtggcccagcaagctcaggtggtgaccacggtggtaggtggtgtcactaagacc
atcaccctggtgaagagtcccatctctgtccctggaggcagtgctctgatttccaatctg
ggcaaagtgatgtccgtggtccagaccaagcccgttcagacttcggcagtcacaggccag
gcctctactggcccggtaacacagattatccagacgaaagggcccctgccagcggggaca
atcctgaagctggtgacctcagccgacggcaagcccaccaccatcatcactaccacccag
gccagcggcgcaggcactaagcccaccatcctgggcatcagcagtgtctcccccagcacc
accaagccgggcacgaccaccatcatcaagaccatccccatgtctgccatcatcacccag
gcaggcgccacaggtgtgaccagcagtcctggcatcaagtcccccatcaccattatcacc
accaaggtcatgacttcgggaactggagcacctgccaaaatcatcactgctgtccccaag
atcgccactggccatgggcagcagggagtgactcaggtggtgctaaagggggctcccgga
cagccgggcaccatcctccgcactgtgcccatgggaggcgtccgcctggtcacccctgtc
accgtctccgctgtcaagccagcagtcaccacattggttgtgaagggcaccacaggggtc
accacgctgggcacggtcacgggcaccgtgtccaccagcctcgctggagctgggggccac
agcactagtgcctctctggccacgcccatcaccactttgggcaccattgccaccctctca
agccaggtgatcaaccccactgccatcactgtgtcggctgcgcagaccacgctgacagct
gctggcgggctcaccactcccaccatcaccatgcagcctgtctcccagcccacccaggtg
accctgatcaccgcgcctagtggggtggaggcccagcctgtgcacgaccttccagtgtcc
atcctggcctcaccgactacggagcagcctacagccacagtcaccatcgctgactcaggc
cagggcgatgtgcagcctggcaccgtgacattggtgtgctccaacccgccatgcgagacc
catgagacgggcacaaccaacaccgccaccaccaccgttgtggctaaccttgggggacat
ccccagcccacccaagtgcagtttgtctgtgacaggcaggaagccacagcttctcttgtg
tcctcgactgtggggcagcagaatggcagtgtggtccgtgtttgctccaacccgccctgt
gagacccatgagacgggtactaccaacaccgccaccacggccacgtccaacatggctggg
cagcgtggctgctccaacccgccctgtgagacccatgagacgggcaccaccagcactgcc
accacagccatggccagcatgggcgctggccagcagcgtgatgcccgccgggtctctggt
gcccccgctgtggtgcgcatcagtgtggctcctggggtgccggagggggcccagggcagc
gccaagccccagtgccaaacccgccaaaccggcaccaccagcaccaccatgactgtgatg
gccagcggcaccccgtgtgcgggtggcctcgggcctgccttcatgcagttggccccgctg
agcagcaaggacgtgcttttggggcaccagctggaggtgcagcacccccacaccgctagc
acgccgagtggggagctcggcatggctcggagggtgcccgcaccagcatacgagggtctc
ccggctggctcacctgtcactgctgtgactgtgactgccctggaggcgtccctgtgtcct
tcggccgccgtgacccaggtctgctccaacccaccatgtgagacccacgagacaggcacc
accaacaccgccactacctccaatgcgggcagtgcccagcgggtgtgcaccaacccgccg
tgcgagacccacgagacgggtaccacgcacacggccaccaccgctgccgccaatggtgcc
gcaggtcagcttgaaggcgggcagcagccctctgccagccggccctgcgagacacaccag
accacctccacaggtaccaccatgtctgtgggcgtgggcgccctgccacccgcccctggc
ccctcgcgcaggaccctggagtccagcctggaggcccccgcgatgccctccaccaccagc
caggccgggcccgcactgctggtccccttcccgcctcagagggtctgctccaacccaccc
tgtgagacccacgagacgggcaccacacacacggccaccactgtcacctcaaacatgact
tccaaccaagaccccccaccggcagccggggatcaggaagaggcggagagcacgcagggc
gacagtgggaacatggccggctccagcaccatcaccacgactatgtcctccacattgccc
cgggcggtgaccaccgtgacccagtccacgccagtcccgggcccctcggtgccgccccct
gaggagctccaggtctcccccgggcctcgccagcagctgccacctcggcagctcctgcag
acggctcctgcgcccctcatgggggagccagccgaggtcctggccgccgcccagcctgca
gagctgcaggccgctgtggacctgagcagcacgggtgacccatcttcgggccaggagccc
cccagctctgcagtggtggccactgtggtggtccagccaccccagcccacgcagtccgag
gtagagcagttgtcacttccccaggagctcatggccgaggcccaggcgggcaccaccacc
ctgatggtcacaggcctcacgcctgaggagctggctgtgactgctgctgctgaggcagcc
gctcaggctgcagccaccgaggaggcgcaggccctggccatccaggccgtgctgcaggcc
gcgcagcaggctgtcatgggcaccggggagcccatggacacatccgaggcagcagcggcc
gtgacccaggcagaactgggtcacctttctgccgagggccaggagggccaggccaccacc
atccccatcgtgctgacgcagcaggagctggcagccctggtccagcagcagcagctgcag
gaggcacaggcgcaggcccagcagcagcatcacctccccaccgaggcgctggccccggcc
gacagcctcaatgacccggctatcgagggcaactgcctcaacgagctggccggcgccgtc
cccaacactgtggccctgttgccgcccacggccaccgagagcctggccccgtccagcacg
tttgtggctccccagccggtggtggttgccagccccgccaagttgcaagctgcggctacg
ctgaccgaagtggccaacggcattgaatctctgggtgtgaaagcagacctgccgccgcct
cccagcaaggcccccgtgaagaaggagaaccagtggtttgatgtgggggtcatcaaaggc
accaacgtgatggtgacacactatttcctgccgccagatgacgctgtccctacggacgac
gactcgggcactgtcccagactacacccagctgaagaagcaggagctccagccaggcaca
gcctataagttccgagtggccggcatcaacgcctgtggccgagggcccttcagtgagatc
tccgctttcaaaacgtgcctgccaggcttccccggcgccccctgcgccattaagatcagc
aagagccctgacggtgcgcacctcacctgggagccaccctccgtgacctcgggcaagatc
atcgagtactccgtgtacctggccatccagagctcgcaggcggggggcgagcccaagggc
gcagcgccagcgcagctggccttcatgcgcgtgtactgcgggcccagcccgtcgtgcctg
gtgcagtcctccagcctgtccaacgcgcacatcgactataccactaagcccgccatcatc
ttccgcatcgccgcgcgcaatgagaagggctacgggccggccacccaggtccggtggctg
caagagaccagcaaggacagctcaggcagcaagccggccagcaagcggcccatgtcctcc
ccagaaaatgtaggtggccagcccggggcggggggggggggtttccaggcagccgggcac
tcgcccgtccccaccttactgtccctgccctcggcgccccaggaaatctgctccaaaaaa
gtcgaaagtgcacggccagtgaagacactggtcgcaccgaaacgccggcctgcgcttcag
gcccgccgcccctccgctccgctccgctatgctctgctccgcaagcacatggctgcctgg
agcccgcccgcccgctgcccgctctcccaccgcccagccgcccgtgcccaccttggaggc
cgtgcacgctccctccctggcggccctgccgcccgctctcccgtccccgcccgcccgggc
cggcagcgccctcctctcctccgccgtggcgcccgggccgagcgtggcctcccctga
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integrated database retrieval system
