Cavia porcellus (domestic guinea pig): 100735451
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Entry
100735451 CDS
T07777
Symbol
Samhd1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03250
Viral life cycle - HIV-1
cpoc04623
Cytosolic DNA-sensing pathway
cpoc05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100735451 (Samhd1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
100735451 (Samhd1)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
100735451 (Samhd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpoc03400
]
100735451 (Samhd1)
DNA repair and recombination proteins [BR:
cpoc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
100735451 (Samhd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_2
SAM_1
HD
PDEase_I
SAM_Ste50p
Motif
Other DBs
NCBI-GeneID:
100735451
NCBI-ProteinID:
XP_003467792
Ensembl:
ENSCPOG00000007987
LinkDB
All DBs
Position
Unknown
AA seq
550 aa
AA seq
DB search
MQRSDSEQPAKRPRCDGSPRTPPNTPARTDKYPLLELHPDHRTWDPEQVCSYLQSCGFEK
SGLLKNFRENKITGSLLPFLDESLLENLGVSSLEDRKKLLNYIRQLSQTQAEPMKVINDP
IHGHIELHPLLIRIIDTPQFQRLRYIKQLGGGYYVFPGASHNRFEHSLGVGYLAGCLVRE
LCDKQPELQISERDMLCVQIAGLCHDLGHGPFSHMFDGRFIPLARPEVKWTHEQGSVQMF
EYLVNSNGLRTVMEQYGLIPEEDICFIKEQIAGPLESPAKDSLWPYKGRPEEKSFLYEIV
ANKRNGIDVDKWDYFARDCHHLGIQNNFDYKRFLKFVRVCEVDNRKHICTRDKEVGNLYD
MFHTRNSLHRRAYQHKVGNIIDTMEDYEHLPKQVADAKPLEMFLEAELKAEDFIVDVINM
DYGMEDKNPIDHVRFYCKSHPYKAIMITKDQVSQLLPERFADQLIRVYCKKMDSKSIYAA
KQHFVHWCAISDFTKPQDGDIVAPLITPQKPEWRPRPVHPTEPSRSKVQLFKGDSVVLKD
ESTLPDDDAM
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgatccgactcggagcagcccgctaagcggccccgatgcgacggcagcccaaga
acgccaccaaacactcccgcaaggacggacaaatacccgctgctggaactccaccccgac
caccggacctgggacccggagcaggtgtgctcctacttgcagagctgtggcttcgaaaaa
tcaggactcctgaaaaacttccgagaaaataaaatcacaggttcattactgccttttttg
gatgagtctcttcttgaaaaccttggagtaagttccttggaggacaggaagaagctgctt
aattatatccgacaattgagtcaaactcaggctgagccaatgaaggtaattaacgaccct
atccatggccatattgagctgcaccctcttctaattcgaattattgacacacctcagttt
cagcgacttcgatatattaaacagttgggaggcggctactatgtttttccaggagcttca
cacaatcgatttgagcatagtctaggggtcggatatctagctggatgtctagttcgtgaa
ctgtgtgacaagcaaccagagctgcagataagtgagcgagatatgctctgtgttcagatt
gctgggctttgtcacgatcttggtcatgggccattttctcatatgtttgatggaagattt
attccacttgctcgaccagaggtgaaatggacgcatgaacagggatcagttcagatgttt
gagtacttagttaattctaatggactcaggactgtcatggaacagtatggtctcatccct
gaggaagatatttgttttatcaaggaacaaattgcaggaccacttgaatcaccagctaaa
gattctttgtggccatataaaggacgtcctgaagagaaaagcttcctttatgagatagtg
gctaataaaagaaatggcattgatgtagataaatgggattattttgccagggactgccat
catcttggaatccaaaataattttgattacaagcgctttcttaagtttgtccgtgtctgt
gaagtggataataggaagcatatttgcactagagataaggaggtgggaaatctgtatgac
atgttccatacacgtaacagtttacaccgcagagcttatcaacataaagttggtaacatc
attgatacaatggaagactatgaacaccttccaaaacaggttgctgatgctaaacctctg
gaaatgttcctggaagctgaattaaaggccgaagatttcatagtggatgttatcaacatg
gattatggaatggaagataagaatccaattgatcatgttcggttctattgtaagagtcac
ccttacaaggcaatcatgattactaaagatcaggtctcacagcttctgccagagagattt
gcagaccagctaattcgagtgtattgtaagaagatggatagtaagagtatatatgctgcc
aaacaacactttgttcactggtgtgcaatcagtgacttcacaaagccacaggatggtgat
attgtagcccccctgataacacctcaaaaaccagagtggcgtcctagaccagttcacccc
acagaaccatccagaagcaaagtccagctgtttaagggtgactccgtggtgctcaaggat
gagtctacactgcctgacgatgatgccatgtga
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