Cavia porcellus (domestic guinea pig): 100735557
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Entry
100735557 CDS
T07777
Symbol
Ncbp1
Name
(RefSeq) nuclear cap-binding protein subunit 1 isoform X1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03013
Nucleocytoplasmic transport
cpoc03015
mRNA surveillance pathway
cpoc03040
Spliceosome
cpoc05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100735557 (Ncbp1)
09122 Translation
03013 Nucleocytoplasmic transport
100735557 (Ncbp1)
03015 mRNA surveillance pathway
100735557 (Ncbp1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100735557 (Ncbp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpoc03019
]
100735557 (Ncbp1)
03041 Spliceosome [BR:
cpoc03041
]
100735557 (Ncbp1)
Messenger RNA biogenesis [BR:
cpoc03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
100735557 (Ncbp1)
Spliceosome [BR:
cpoc03041
]
Common components
Common spliceosomal components
Cap binding complex
100735557 (Ncbp1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
Cob_adeno_trans
DUF2524
Motif
Other DBs
NCBI-GeneID:
100735557
NCBI-ProteinID:
XP_023421294
LinkDB
All DBs
Position
Unknown
AA seq
500 aa
AA seq
DB search
MFDYTDDPEGPVMPGSHSVERFVIEENLHCIIKSHWKERKTCAAQLVSYPGKNKIPLNYH
IVEVIFAELFQLPAPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCV
DRFINWFSHHLSNFQFRWSWEDWSDCLAQDPESPKPKFVREVLEKCMRLSYHQRILDIVP
PTFSALCPANPTCIYKYGDESSNSLPGHSVALCLAVAFKSKATNDEIFSILKDVPNPNQD
DDDDEGFSFNPLKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVM
FEVWRNHPQMIAVLVDKMIRTQIVDCAAVANWIFSSELSRDFTRLFVWEILHSTIRKMNK
HVLKIQKELEEAKEKLARQHKRRSDDDDRSSDRKDGALEEQIERLQEKVESAQSEQKNLF
LVIFQRFIMILTEHLVRCETDGTSVLTPWYKNCIERLQQIFLQHHQIIQQYMVTLENLLF
TAELDPHILAVFQQFCALQA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgtttgattatacagatgatcctgagggtcctgtgatgccagggagtcactcagtggaa
aggtttgtgatagaggaaaacctccactgcatcattaagtcacactggaaggaaaggaag
acctgtgccgcacagctagtgagctacccagggaagaacaagatccccttgaactaccac
atagttgaggtgatctttgcagagctgtttcagcttccagcaccccctcacattgatgtg
atgtatacaacacttctcattgaattgtgcaaacttcagcctggctctctaccccaagtt
cttgcacaggcaactgaaatgttatacatgcgtttagatacaatgaatactacgtgtgta
gataggtttattaattggttttctcatcatttaagtaactttcagtttcgctggagctgg
gaagattggtcagattgtctggctcaagatcctgaaagtcccaaaccaaagtttgtaaga
gaagttttagaaaaatgtatgaggttgtcttaccatcagcgtatattagatattgttcct
cctaccttctcagccctctgtcctgcaaatccaacctgcatttataaatacggagatgaa
agtagcaattcacttcctggacattctgtggccctctgtttagcagttgcttttaaaagt
aaggcaaccaatgatgaaatcttcagcattttgaaagatgtaccaaatcctaaccaggat
gatgacgatgatgaaggattcagttttaaccctttgaaaatagaggttttcgtacagact
ctgctacatttggcagccaaatcatttagccactccttcagtgctcttgcaaagtttcat
gaggtcttcaaaactctagcagaaagtgatgagggaaagttacatgtgctaagagttatg
tttgaagtctggagaaaccatccacagatgattgctgtactagttgataagatgattcgt
acacagattgttgactgtgctgcagtagcaaactggatcttctcttcagaactttcgcgt
gactttactagattatttgtttgggaaatcttgcactctacaattcgtaagatgaacaaa
cacgttctgaagatccagaaagaactggaagaagctaaagagaaactggcaaggcaacac
aaacggcgaagtgatgatgatgaccgaagcagtgacaggaaagatggggcccttgaggag
caaatagaaagactacaggaaaaggtggagtctgcacagagtgaacagaagaaccttttt
cttgtcatatttcagcgttttatcatgatcttaacagagcacttagtaagatgtgaaact
gatgggaccagtgtattaacaccatggtacaagaactgtatagagaggctccagcagatc
ttcctacagcatcaccagataatccagcagtacatggtgaccctggagaaccttctcttc
actgccgaattggaccctcatattttagctgtattccagcagttctgtgctctgcaggcc
taa
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