Cavia porcellus (domestic guinea pig): 100735811
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Entry
100735811 CDS
T07777
Symbol
Cic
Name
(RefSeq) protein capicua homolog isoform X5
KO
K20225
capicua transcriptional repressor
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
100735811 (Cic)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpoc03000
]
100735811 (Cic)
Transcription factors [BR:
cpoc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100735811 (Cic)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
100735811
NCBI-ProteinID:
XP_003464693
Ensembl:
ENSCPOG00000004391
LinkDB
All DBs
Position
Unknown
AA seq
1618 aa
AA seq
DB search
MYSAHRPLMPASGAASRGLGMFVWTNVEPRSVAVFPWHSLVPFLAPSQPDPSVQPNEAQQ
PASHPVASNQSKEPAESAAVAHEQPQGGTGSADPGRPPGATCPESPGPGPPHTLGVVEPG
KGPPPTTEEEAPGPPGEPRLDSETESDHDDAFLSIMSPEIQLPLPPGKRRTQSLSALPKE
RDSSSEKDGRSPNKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYA
LGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSEAKPTSLGLAGGHKETRERSM
SETGTAAAPGVSSELLSVAAQTLLSSDTKAPGSGSCGAERLHAVGGPGSARPRAFSHSGV
HSLDGGEVDSQALQELTQMVSGPTSYSGPKPSTQYGTSGPFAAPSEGGTLAASGRPPLLP
TRASRSQRAASEDMTSDEERMVICEEEGDDDVIADDGFGATDIDLKCKERVTDSESGDSS
GEDPEGNKGFGRKVFSPVIRSSFTHCRPTLDPEPPGPPDPPAAAAFGKGYGPTPSSSSSS
SSSLAASTSVATSFSLGSGTFKAQESGQGSTAVPLRPPLSGAGGPATPSKVTRFLPTDPA
NFRRKRPESVGGLEPPGPSVISAPPSGGGNILQTLVLPSNKEEREGSGARVPSTPAPSLA
YGAPAAPLSRPAATMVTSVVRPVSSTPVPIASKPFPTSGRAEASPNDTAGARTEMGTGSR
VPGGSPLGVSLVYSDKKSAATSPAPHLVAGPLLGTVGKAPATVTNLLVGTPGYGAPAPPA
VQFITQGAPSSGTTAGSGAGSGSGPNGPVPLGILQSGALGKAGGITQVQYILPTLPQQLQ
VAPAPAAAPGTKSAAPSGPVPTTSIRFTLPPGTSTNGKVLAATAPTPGIPILQSVPSAPP
PKAQSVSPVQAPPPGGSAQLLPGKVLVPLATPSMSVRSGGAGQSLPLVSPPFSVPVQNGA
QPPSKIIQLTPVPVSTPSGLVPPLSPAPLPGTTSQPQKVLLPSSTRITYVQSAGGHTLPL
GTSPVSSQAGAVTSYGPTSSVALGFTSLGPSGPAFVQPLLSAGQAPLLAPGQVGVSPVPS
PQLPPACTAPGGPVITAFYPGSPAPSSSAPVAQPSQAPPSLVYTVATSTTPPAATTILPK
GPPVPATATPAPTSPFPSATGGSMTYSLVAPKAQRPSPKAPQKVKAAIASIPVGSFEAGA
TGRPGPVSRQPLESGPAREPATPDTELEGQPTPPAPPPPPETWPPTARSSPPPPLPAEER
TGTKVPDAMASKFSSSSSDWRVPGMSLESRGEPPTPPSPAPAPATAPGGSSSSSSSSSEG
SSGRAAGDTPERKEAASTGKKVKVRPPPLKKTFDSVDNRVLSEVDFEERFAELPEFRPEE
VLPSPTLQSLATSPRAILGSYRKKRKNSTDLDSAPEDPTSPKRKMRRRSSCSSEPNTPKS
AKCEGDIFTFDRTGTEAEDVLGELEYEKVPYSSLRRTLDQRRALVMQLFQDHGFFPSAQA
TAAFQARYADIFPSKVCLQLKIREVRQKIMQAATPTEQPPGAEPPLPGPPPAGTAATPAP
TPSPAGGPDPTLPSSDSGTAQAAPPLPPPPEPGSGQPGWEGAPHPSPPSGPSTAATSR
NT seq
4857 nt
NT seq
+upstream
nt +downstream
nt
atgtattcggcccacaggcccctgatgcccgcgtccggcgcggcctcccgtggcctcggc
atgttcgtgtggacaaatgtggaacctcgttctgtggctgtgttcccttggcattcctta
gttcccttcctggcacccagccagccagacccctctgtgcagccaaatgaggcccaacaa
cctgccagccaccctgtggcctccaaccagagcaaagaacctgctgagtctgcagctgtt
gctcatgagcagcctcaaggtgggacagggagtgctgaccctgggcggccccctggagcc
acatgccctgagagcccagggcctggacccccgcatactttgggagtggtggaacctggt
aaaggtcctcctcctaccactgaggaggaggcccctgggcccccaggagaaccccggctg
gatagtgagacagagagcgaccatgatgatgcctttctttccatcatgtctcctgagatc
cagttgcctctgccacctggaaaacgtcggacccagtcacttagtgccctgcctaaggaa
agagattcatcttctgagaaggatggacgcagccctaataagcgggaaaaggaccacatc
cggaggcccatgaatgctttcatgatcttcagtaagcggcaccgagccctggtccaccag
cgtcaccccaaccaggacaaccggactgtcagcaagatcctgggcgagtggtggtatgcc
ctggggcccaaagagaagcagaagtatcatgacctggccttccaggtgaaggaggcccac
ttcaaggcccacccagattggaagtggtgcaacaaggaccgaaagaagtccagctcagag
gccaagcccacaagcctggggctggcaggagggcacaaggagacgcgggagcggagcatg
tcggagacgggcactgccgctgcccctggggtgtcctctgagctcctgtccgttgcagcc
cagacactcttgagctcagacaccaaggctccggggagtggctcctgtggagcagaacgg
ctgcatgcagttgggggacctggctcagcccgtccccgagccttttcccacagtggggta
cacagcctggacggtggggaagtagacagccaggcactacaggaattgactcagatggtg
tctggccccacgtcatactctggcccaaagccttccacccagtatggcacttcaggccct
ttcgcagctcccagtgagggaggcaccttggcagccagtgggcggcccccactgctgccc
acccgagcctctcgttcccagcgtgcagccagtgaggacatgaccagtgatgaggaacgc
atggtcatctgtgaagaagaaggggatgatgatgttattgctgatgatggctttggtgcc
actgatattgatctcaagtgtaaggagcgggtgactgatagtgagagtggagacagctct
ggggaggaccctgaaggcaacaagggctttggccgtaaggtgttctcacctgtgatccgt
tcttccttcacccattgccgtccaacattagaccctgagcctccagggcccccagatcca
cctgcagctgcagcctttgggaaaggctatggccccaccccatcttcctcttcctcctcc
tcatcctcacttgctgcctcaacctcagtagccacttccttctcactgggctctggaacc
ttcaaagcccaggagtctggtcagggcagtacagcagtcccacttcggcctccactctca
ggggctggaggcccagcaacaccttccaaggttactcggtttctcccaacggatcctgcc
aacttccggcgcaagagacctgaaagtgttgggggcttggaaccaccaggtccttcagtc
atttcagcacctcccagtggtggaggaaacatccttcagacactagtcctgccctcaaac
aaggaggaacgggagggcagtggggcccgagtaccctcaacccctgccccatccctggcc
tatggagccccagcagcccctctgtcccgccctgctgccaccatggtcaccagtgtagtg
cgacctgtcagcagcactcctgtgcccattgcctctaagccgtttcccacttctggcagg
gctgaagcatctccaaatgatacagcaggtgccaggactgaaatgggtactgggtctcgg
gtacctgggggctctccactgggtgtcagcttagtatattcggacaagaagtcagcagcc
acctcaccagcccctcacttggtggctgggcccttgttgggcactgtagggaaggcacct
gccactgtcaccaacctgctggtgggcaccccaggctatggagctcctgcaccacctgcc
gttcagtttatcactcaaggggcccctagcagtgggaccactgcaggctcaggggcaggt
tctggaagtggcccaaatgggccagtacccctgggcatcctgcaatcaggtgccctgggc
aaggctggaggaatcacccaggtgcaatacatcttgcccacgctgccccagcagcttcaa
gtggcacctgccccagcagcagcccctgggaccaagtcagcagctcccagtggtcctgtg
cccaccaccagcatccgtttcactctcccaccgggcacctccaccaacggcaaggtcctg
gccgccactgcacccactcctggcatccccatcttgcagtctgtaccctctgccccaccc
cctaaagcccaatcagtttcgcctgtgcaggccccacccccaggtggctctgcccagctg
ctacctgggaaggtactagtgcctctggcaacccctagcatgtcagtacggagtggaggg
gctggccagtcactgcccctagtaagcccgccattctcagtacctgtgcagaatggtgcc
cagccacccagcaagatcatccagctgactcctgtgcctgtgagcacacccagcggcctg
gtgccgcccttgagcccagcccccctccctggaaccacctcacagcctcagaaggtcctg
ttgccctcctccaccagaatcacctacgtgcagtcagcaggtgggcacacactgcccctg
ggcaccagccctgtgtccagccaggctggagcagttacctcttatgggcccacaagctct
gtagctctaggcttcacttcactggggcccagtggaccagcgtttgtgcagcccctgctc
tcagcaggtcaagccccattgttggctcctggccaagtgggcgtgtcaccggtgcccagc
ccccagctgcctcctgcctgcacagcaccgggaggtcctgtcataacagcattttaccct
ggcagccctgcaccctcctcctcagcacctgtggctcagccatcccaggcccccccaagt
ctggtgtataccgtggccaccagcaccaccccacctgctgccactaccattctgcccaag
ggcccaccggtccctgccactgctaccccagcccctactagtcctttccctagcgctaca
ggaggctccatgacctacagtttagtggccccgaaagcccagcggcccagcccaaaggcc
ccccaaaaagtgaaggcagccatcgccagcattcctgtaggctcctttgaagcaggtgcc
actgggcggcctggacctgtatctcggcagcctctagagtctggtcctgcccgagagcca
gctacaccagatactgagcttgaggggcagcctacaccgccagctcctccaccaccccca
gagacctggcctcccacagcccggagcagtccaccaccacccttgcctgctgaggaacgg
actggtaccaaggtccctgatgccatggctagcaaattctccagctcatcctcagactgg
cgcgttcctgggatgagcctagaaagccgtggggagcctcccactcctcccagtccagcc
ccagctcctgccacagccccaggtggtagcagcagcagcagtagcagcagcagcgagggc
agcagtgggagggcggccggggacacgcctgagcgcaaggaggctgctagtactggcaag
aaggtgaaggtgcggcccccacccctgaagaagacctttgactctgtggacaacagggtc
ctgtcagaggtggacttcgaagaacgctttgctgagctgcccgaatttcgaccagaggaa
gtactgccatcacccactctgcagtctctggccacctcgcctcgggccatcctgggctct
taccgcaaaaagaggaagaactccacggacctggactcagcaccagaggaccctacctca
cctaagcgcaagatgaggagacgctctagctgcagctcagagcccaacacccccaagagt
gccaagtgcgagggggacatcttcacctttgaccgcacagggacagaggctgaggatgtg
ttaggagagctggaatatgagaaggtgccatattcctccctgcggcgtacgctggaccag
cgtcgggccctggtcatgcagctcttccaggaccacggcttcttcccgtcagcccaggcc
acagcagcctttcaggcccgctatgcagacatctttccatctaaggtttgtctgcaactg
aagatccgagaggtgcgccagaagatcatgcaggcagccactcccacagagcagccccct
ggagctgagccgccccttcccggaccgcccccagctggcactgctgctacccctgctcct
acacccagccctgctggaggccctgaccctactttacctagctcggactctggcacagcc
caggctgccccaccactgcctccacctccagagccgggatctggacagcctggctgggag
ggggccccccacccttctccaccctcgggcccttccacagctgccacaagcaggtga
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