Cavia porcellus (domestic guinea pig): 100736123
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Entry
100736123 CDS
T07777
Symbol
Srrm1
Name
(RefSeq) LOW QUALITY PROTEIN: serine/arginine repetitive matrix protein 1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03013
Nucleocytoplasmic transport
cpoc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100736123 (Srrm1)
03015 mRNA surveillance pathway
100736123 (Srrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpoc03019
]
100736123 (Srrm1)
03041 Spliceosome [BR:
cpoc03041
]
100736123 (Srrm1)
Messenger RNA biogenesis [BR:
cpoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100736123 (Srrm1)
Spliceosome [BR:
cpoc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
100736123 (Srrm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
100736123
NCBI-ProteinID:
XP_013009449
Ensembl:
ENSCPOG00000015594
LinkDB
All DBs
Position
Unknown
AA seq
912 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREXMGELWPXLLSAQENIAGIP
TAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSP
SPRRRSSPVRRERKRSHSRSPRHRTKSRSPTPAPEKKEKTPELPEPSVKVKEPSVQEATS
TSDILKVPKPEPMPEPKEPSPEKNSKKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRH
RSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSS
SSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQSNR
TRKSRVSVSPGRTSVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQQRRQ
YRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRM
QMGKRWQSPVTKSGRRRRSPSPPPARRRRSPSPAPPPRRRRSPTPPPRRRTPSPPPRRRS
PSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSPSPPPKQRSSPATK
RRSPSLSSKHRKGSSPSRAPRETRSPQPNKRHSPSPRPRVPQTSSPPPVRRGTSASPQRR
QSPSPSTRPIRRVSRTPELKKTKKAASPSPQSVRRVSSSRSVSGSPEPAKKPPAPPSPVQ
SQSPSTNWSPAVPVKKAKSPTPSPSPARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHK
KEKAVAAAAVAPTAPAAVAPTTTTSAQEEPEAAPEPKKETESEAEDNLDDLEKHLREKAL
RSMRKAQVSPQS
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggaacaagtgcagaacaggataatcggttcagcaacaag
cagaagaaattactgaagcagctgaaatttgcagaatgcctagaaaaaaaggtggacatg
agcaaagtaaatttggaggttataaagccttggataacaaaacgagtaacagaaatcctt
ggatttgaagatgatgttgtgattgagtttatattcaaccagctggaagtgaagaatcca
gattccaaaatgatgcaaatcaacctgactgggtttttgaatgggaaaaatgctagagaa
nttatgggagaactttggcccntgctgttaagtgcacaagaaaacatcgctggaatccct
actgcattcctagaactaaagaaagaagaaataaaacaaagacagattgaacaagaaaaa
ttggcatcaatgaaaaagcaagatgaagacaaagataagagggataaggaagaaaaagaa
agcagtagagaaaaaagggagcggtctcgaagccccagaagacgcaaatccagatctcct
tcccctagaagacggtcttcccctgtcaggagagagagaaagcgcagtcactctcggtct
ccccgtcacagaaccaagagccggagtcctacccctgctccagagaaaaaggaaaagact
ccagagctccccgaaccttccgtgaaagtaaaagaaccttcagtacaagaggccacatct
actagtgatatcctgaaagttcccaagcctgaacccatgccagaacctaaagaaccttct
ccagaaaaaaattccaaaaaagaaaaggagaagacccggccaagatcccggtcacgctcc
aagtcaaggtcacggacccgctcccgctcgccttctcatactcggccaagacggcgccat
aggtccagatcaagatcatactcacctagaaggcggccaagcccgcgaaggagaccatct
cctcgaagaagaactccacctcgacgcatgccgcctcctccgaggcataggaggagtaga
tctccagtgaggagaagaaggcgctcatcagcatccttgtctgggagtagctcatcatcc
tcatcatctcgttcccggtcaccaccaaagaaacctcccaagaggacctctagtccccct
cgaaaaactcgtaggctgtctccttcagcaagtcctccaaggcgaaggcacagaccatca
cctccagctactccaccaccaaaaactcgtcattccccaacaccccagcagtcaaaccgc
acaagaaaaagccgtgtttctgtgtctccagggagaacttcagtgacaaaacataaaggt
actgagaaaagagaatcaccatcaccagcaccaaagcctagaaaagtagagttatctgaa
tctgaagaagataaaggtggcaaaatggctgcagccgattctgtgcagcagagacgccag
tacagacgacagaaccagcagtcttcatctgactctggctcctcgtcttcctctgaagat
gaacgacccaagcgatcccatgtgaaaaatggtgaggtgggcaggcggcggagacattcc
ccttcccggagtgcatctccatcgccacgaaaacgtcagaaagagacttctcctcggatg
cagatgggaaagcgatggcaatcgccagtgactaaaagtggtagacgaaggagaagcccc
tcccctccacccgccagaaggcgccgctctccttctccagctcctcctcctcggcggcgc
agatcgcccacaccaccgccacgacgaaggactccctcgcctccccctcggcggcgctca
ccttccccaagaagatactctcctcccatacagaggaggtactctccatcgccacctcca
aagagaagaacggcttcgcccccgccccctcctaagagaagggcatcaccatccccacca
ccaaagcgccgagtctccccctctccacctcccaagcaaagaagctccccagccaccaag
agacgctcgccttctctctcatcaaagcataggaaagggtcttccccaagccgtgctccc
agggagacccgctcaccacagccaaacaaacgacattctccttccccgcggcctcgggtt
cctcagacctcaagtcctcctcctgttcgaagaggaacctcggcatcaccccaaagaagg
cagtccccatcaccgagtaccaggcctattagaagagtctccagaactccagaacttaaa
aagacaaaaaaggctgcctcaccaagtccacagtccgtgagaagggtttcatcctctcgc
tccgtctctggatctcctgaaccagctaaaaagcccccagcacctccatcccctgtccag
tctcaatctccctctacaaactggtcaccagcggtaccagtcaaaaaggctaaaagccca
acaccaagcccatcaccagccaggaattctgatcaagagggaggtgggaagaaaaagaag
aaaaagaaggacaagaaacacaaaaaggataagaaacacaagaagcacaaaaaacacaag
aaggaaaaggcggtggctgcagccgccgtggctcccacagcccctgcagccgtcgccccc
accacaaccacgtcagcacaggaagaacccgaggcggctccggaacccaagaaggagact
gaaagtgaagccgaagataacctggacgacttagagaagcacctgcgggaaaaggctctg
aggtccatgcggaaggctcaggtgtccccacagtcctag
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