Cavia porcellus (domestic guinea pig): 101787108
Help
Entry
101787108 CDS
T07777
Name
(RefSeq) collagen alpha-1(I) chain-like
Organism
cpoc
Cavia porcellus (domestic guinea pig)
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
101787108
NCBI-ProteinID:
XP_012996990
LinkDB
All DBs
Position
Unknown
AA seq
1391 aa
AA seq
DB search
VRGGRGTFRLPTSTPDAGATLPRPHGADGVASGRPARKNRTTPETPRVRGHESAFITRRD
GALRQPTEPGATARSGADERTGTEGPTPQAPGGGGSPPPSPLNGKGGPAPNANTAPTTGR
VYPPDPAGTPGDVSGARRPGPNRGEAGGERVHTRGGRGRSGEAGGPARRREHSGIGDQRP
RRADFSRPSPSRPNPRHGPPGAPSATPPARPQGRRGDHPPQGVFKPPRRDALGTWRGRAD
ARKHGANAHVQKRERERGHGGPEEETGGGRPGQPTPPALPPAPSPPTRAPTRRRPSGHGA
RGGGEEGQGESGATDRHRPARPSHATPTRGAHAGHRHSRPLHSLARSALARHRPEREACR
RVKRTPPHGRSVGRPGTRAARSPGAATNPQAWHGPGRVPEPGDPYRNAPHARRDATRHDN
DAGEDGASRLLEEEHRRNSTPSSDPNRTTDRPTDRQESFSFATILPPEPKDFGFPEAARR
VMGITPPHRQSASFMVGTTTRKNERGGERQTPREDATRRDDDDDDDDDGRAGERGEERGA
ARQPRPPPAARPPPAADAPNDGLPPTVARGPGRNRGHPRGSGNGGGPADPTRSPGSTRRS
RDTRPPQHHAVQGPGEARTRARERPRDGGGRSRAPPAAAKAQRRHPRGPLAVTRGRGREP
ERGAGRDRDPPAATRPPPTSARRTRPPSRSRRGVGVEGRGPLPAPPTPAGGGGTPRHRRR
RRPTPRRDRVGPRPTSRRAPALATRGNTRPSERGGAWPAPSPSDGHGGTARRPNTGTGAA
TGLPPHRHAADSGTHRRSRTRPEYEERGHVGRRREDGEGTVKREGAPLWAKTRRGRGESP
VTREGARETYRGRTDRARPGTRHGRRSHRRRPQPGRGGSHPPLTRPRRDTRPATPRSEPR
GAHLRGAETPHPTAASGAASARPPTKRGSTRSTSRPSNATCPAEHTSDPGSRAPDEPERG
WGKQGGATGSGTRRRINDGEERGDARRGGVPSPHRSGGARQQEQLREEKNPHTKRGGGGR
RLGRAVGPPGKPRGNPTAHKGGSRDASEALLTTSRHRRGVARPHDSFHSHGRDIRAHQDG
LPPPHSHPTARAPTVTPSQRTGNTDGTLPRRGGRGGEADRPRAHTGTAVAAGRGNGDRTT
TRVRRTRVSSSRRARGGRVRGNGPRAPSTHTGFASTGGGDEATRARAHARRTVPPPHNTR
TGRRPRAQRTLPRLGGGRRGPQPEAKSGRTTPTAGTGGPLLPPHHGRAWGRRAALAQTRT
DRRLRRSDVSGYRARLRKETNAGGHRHEAHPSLGSLEKTLLTEGGPHPAPSGPPSEREGK
PSRRQSQAWGGSAVQAQGRAQQASRAYAAGAGRGARHPPPRAGLPQIQRLAVPGGNGRTA
LKPPAKRGEER
NT seq
4178 nt
NT seq
+upstream
nt +downstream
nt
acgtgcgaggggggagaggaacgttccgcctccccacaagcacccccgacgctggcgcga
cacttccacgcccgcacggggcagacggggtcgcctcgggccggccagcaagaaagaaca
gaacgacaccagaaactccgagggttaggggccacgagagcgcgtttatcacgcgccgag
acggggctcttcggcaacccaccgagcccggcgccacggcccgcagcggagcggacgagc
gcacggggacggaaggaccgaccccacaggcgcccgggggggggggatccccaccacctt
cccccctcaacggaaagggagggcccgcgcccaacgccaacacggccccgacgaccggcc
gggtataccccccggacccggccgggacgcccggagacgtcagcggcgcgcggcgccccg
gcccaaaccgaggagaggcgggcggggaaagagtacacacgcgtgggggcagggggagga
gcggggaggcgggaggaccggcgcggagaagagagcacagcggcatcggggaccaacgcc
cccgacgtgccgacttctcacgtccaagtccttcccgcccaaatccccgacacgggcccc
caggagcccccagcgcgaccccgccggccaggccccaaggccggcggggtgaccaccccc
cccaaggggtctttaaacctccgcgccgggacgcgctaggtacctggagagggagggcag
acgcgcggaagcacggagcgaacgcacacgtgcagaagcgggagcgggagcgcggccacg
gcggcccggaggaagagacgggcggcgggcggccgggccagccgaccccgcccgccctcc
cgcctgcccccagtcctcccacacgcgccccgacacgacgccgacccagcggacacggcg
ccagaggcggcggggaggagggtcagggggagagcggcgcgaccgacagacaccggcccg
cacgcccttcacacgccacgcccacccgaggcgcacacgcgggtcaccgacactcccgcc
cgctccactcgctggctcgctcagctctcgcccgacaccgccccgagcgggaagcctgtc
gtcgcgtgaagagaacccccccacacggccggtcggtcggccggccgggcacgcgcgcgg
cgcgatctcccggagccgccaccaacccccaagcctggcacggaccgggccgggtcccgg
aacccggggacccgtaccgcaacgcaccacacgcgcggcgcgacgcgacgcgacacgaca
acgacgcgggcgaggacggggcctcccggcttctcgaggaggaacacaggaggaactcga
ctccgtcaagcgatcccaatcgaacgaccgaccgaccgaccgaccggcaggaaagtttca
gctttgcaaccatactccccccggaacccaaagactttggtttcccggaagctgcccggc
gggtcatgggaataacgccgccgcatcgccagtcggcatcgtttatggtcggaactacga
cgaggaagaacgagcgcggcggcgagcgacagacgccgagggaggacgcgacgcggcggg
acgacgacgacgacgacgacgacgacggcagagcgggcgagagaggggaagagagaggcg
cggcgcgccaacctcgaccaccccccgccgcgcgaccgccgccggccgccgacgccccca
acgacggcctcccaccgaccgtcgcccgcgggcctggccggaaccgaggacacccgcggg
ggagcgggaacggcggcgggcccgccgacccaactcgctcacccggctccacacggcgaa
gccgagacacccggccgccccaacaccacgccgtccagggccccggagaggcgcggacgc
gagcacgcgagaggcctcgagacggcggcgggcgctcgcgcgcacccccggcggcggcga
aggcccagcggcgacacccccgcggcccgctggcggtgacgcgcgggcgaggcagagagc
ccgagcgcggggccggccgggaccgagacccgcccgccgcgacgcggccaccgccgacct
cggcgcggcgcacccgcccgccctcgcggtcgaggcgtggggtcggggtcgagggccgag
gccctctcccggccccaccaaccccggccgggggaggcggcacgccgcgacacagaagac
ggcggcgacccacgccgcgacgggaccgggtcgggccacgtccgacctcgcgacgggctc
cggcactcgccacacgcgggaacacacgaccgagcgagcgggggggagcgtggccggcac
catcaccgtcggacggccacgggggaacggcacggcgccccaacacggggaccggggccg
cgacgggcctacccccgcaccgccacgcggcggacagcggtacacaccggagaagccgaa
cccgacccgagtacgaggagcggggtcacgtgggacggcggcgcgaagacggcgaaggga
ccgtcaagcgagaaggagctcccctgtgggccaagacacggcgcggtcggggggaatcgc
cggtcacgcgcgagggcgcccgggagacgtaccgagggcgcaccgaccgggcacgtccgg
gcacgcgacacgggaggcgttctcaccgccggcgcccccaacctgggcgcggtggcagcc
accccccgctgacacgcccgagacgagacacacggccggcgacgccccggtcagagcccc
ggggcgcgcacctccgcggagccgagaccccacaccccaccgcagcctcaggagccgcca
gcgcgcgcccccccaccaaacggggctcaacccgcagcaccagccgaccgtccaacgcca
cctgccccgccgagcacacctcggaccccgggtcccgcgccccagacgagccggagcggg
ggtgggggaagcagggcggcgcgacgggctcaggcacccggaggaggatcaacgacggcg
aggagcggggagacgcacgcaggggcggggtaccatccccccatcggtcagggggggcaa
ggcagcaggagcagctccgggaagagaagaacccccacaccaagaggggaggcgggggca
gacgcctcgggcgcgcggtcgggccaccaggaaaaccacgcgggaacccaaccgcccaca
agggcggctcccgcgacgcctccgaagccctcctgacaacctcacgccaccggcggggag
tggcacgcccgcacgactcctttcacagccacgggagagacatccgagcacaccaagacg
gcctcccaccgcctcacagccacccgaccgcacgggcaccgaccgtcaccccgagtcaga
ggaccggcaacaccgacggaacgctcccgcggcggggagggaggggaggcgaggcggacc
ggccccgtgcccacacaggcaccgccgtcgccgccggacgcggcaacggggaccggacga
cgacaagagtgaggcggacgcgggtatccagctcacggcgggcacggggagggagggtcc
gggggaacgggccccgcgcaccctccacacacacggggttcgcctccaccggcggggggg
acgaagccacacgcgcgcgcgctcacgcgcggcgaaccgtcccccctcctcacaacacac
gcaccgggcgccggccccgggcccagcggaccctcccccgactcggaggggggaggcgcg
ggccacagccagaggcaaagagcgggcgcacgacccccaccgcggggaccggcggacccc
tccttccaccccaccacggcagagcttggggaaggagggcagctctcgcccagacacgca
ccgaccgacggctacgacgcagcgacgtcagcggctaccgcgcgaggctgagaaaggaga
caaacgcgggcggccaccgtcacgaggcacacccttctctcggatcgctagagaagactc
ttctcactgagggcgggccgcacccggccccgagcggacccccatcggagcgcgaaggga
aaccgtcgaggagacaaagccaggcttgggggggatctgcggtacaggcacagggtcggg
cacaacaagcgtctcgagcgtacgcggccggggccggcaggggagcccgccacccgccac
cacgggccgggctcccccaaatccagcgtctggccgtgccgggcggcaacggcagaacgg
ccctcaaacctcccgcaaagagaggagaggaaaggtag
DBGET
integrated database retrieval system