Cavia porcellus (domestic guinea pig): 101787829
Help
Entry
101787829 CDS
T07777
Symbol
Rif1
Name
(RefSeq) LOW QUALITY PROTEIN: telomere-associated protein RIF1
KO
K11138
telomere-associated protein RIF1
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
101787829 (Rif1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpoc03032
]
101787829 (Rif1)
DNA replication proteins [BR:
cpoc03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
101787829 (Rif1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rif1_N
V-ATPase_H_N
HEAT_ULK4
NICE-1
Motif
Other DBs
NCBI-GeneID:
101787829
NCBI-ProteinID:
XP_023416896
Ensembl:
ENSCPOG00000037898
LinkDB
All DBs
Position
Unknown
AA seq
2469 aa
AA seq
DB search
MSALGENPLLPLLETLEDSSAFPGEQTDAYLTLTSRMTGDEGKEVVIEMEKNLPRLYKVL
KTHISNQNSELSSAALQALGFCLYNPKITSGLSEANIQELLSELNDIIKSSDKNVRTRAL
WVISKQTFPTEAVGRMVSSIIDSLEIILTKGEIHSAVVDFEALNVIIRLIEQAPVQMGEE
SVRWAKLVIPLVVHSAQKVHLRGATALEMGMPLLLQKQQEIANITEHLMTTKLISELQKL
FMNKNETYVLKLWPLFVRLLGKTLHRSGSFINSLLQLEELGFRSGTPMIKKIAFIAWKSL
IDNFALNSDIYCXCTRLKLLMQPLSSIHVRTETLALTKLEVWWYLLMRLGPHLPANFEQV
CVPLIQSTISDSSTSPPGNSSRVAASPGLSPMTPVHKGASPYGVPVTTRMNMSTNLGGMA
AIPSIQLLGLEMLLHFLLGPEVLNFAKQHKLVLNLEPLEHPLISSPSFFSKHAHTLITAV
HDSFVAVEEDALYLLCLTDAVVNAIWKALISLVNSLTESGNKKEKPGSEVLTLLLKSLES
VVKSEVLPISKTLVLMEITIKGLPQKVLGSPAYQVANMDILNGTPALFLIQLIFSCYIQE
CGIADERFFLNLESLVGCVLSGPTSPLAFSDSVLSVINQNAKQLENKEHLCRMWSIIVTP
LTELINQTNEVNQGDALEHNFSAIYSALTLPINHIFSAQRFPVVTMKALLRTWSELYRIF
ARCAALVATTEENLCCEELSSKIMSTLEDEAFLNLLFLDRIIHIITVIVDCIDFSPYNNK
YQPIVKSPQRSSDWAKKKKEPLGKLASLFKLTVRVICSFHTLSFKETHSDTLLGIGNSII
NMISNLLGHISLPSVIRKIFTVLTRPLALFYENSNLDEVPKVYSSLNNKLEKLLGEIVTC
LQFNAGTFDSELLEQLSPLLCIIFLHKNKQIRKQCAQFWNATFAKVMMLTYPEELKPVLR
EAKQKVLLLLPGLENVEIMEESSASYSDATENSQLNIKISGLERKSNGKRDSFLAQTKGR
KENVKLSAKLKRESSSLRVKSEPLLEEEKSTDFVLIPPEGKESKERILTEHQKEVLKTKR
CDIPAMYNNLDVSQDTVFTDHYSQEDSVQTPTLTEKPKEDTKVVTKEEQMKSDTVIQDAL
ENCGMDEHVKKASFSNNECGFVPKTNPEIMSGSNEARKNSLISSKKTSTECASSAENSLV
SSQSISDASISETPPQTTSRRQSFITLEKFDGSENRPFSVPSLSSMSSNTLVQNSQENMT
TTDNTSKTNKREMMHSKSDSEKNLHGIRKSSRRLSKVEKSASKRSKPLIKSQQEENQELV
EGTISLENNSPVFFNQTDCSSDGQTHISDSVPEHEDRRPKLTLENTVLLENGTVQDKNMG
INLESKENTPPAQPPADQIVNEDSQVQVTPNQKTLRRSSRRRSEITDAVGDNQDKENSHQ
KKERHKEEEKLQGLLHVKDDVLPKQKLTYEQTGQENLLEKESNLHEKACGETSVNADIDQ
SKRKPDLENVNSQGDSALDIVDKSSERPLRGRTRYQTRRLSQGLLSSIENSESDSSEAKE
EGSRKKRSGKLKNKNNDSIDTEQEEKITEEESGSVTNHTQDYKAISEIDVDKKPQVLEKG
QSNTIILQDSKTSVGMLQVSVDVPNTCEERVKTTKCLESSFASSPMPESNLKTRNASKRS
VKQDSDNSVGECSRIGASEMSTLSEKNVQTIECHHKRSRRVRRSKGCDCCGEKSQPQEKS
PIGLRNTENTDIKSSEIKTSVQTPDTVLETDSKANLCSEVKVLDERASVSFSLVLKGNDT
INDSVLGPETELKKNTIQKSSEIISLKEKACDTNSGEACDTNSGEALCPESEEPSNKKFK
AEDPCLENSKDISEAYHLDTTGENPETTLKIELNVVNIKGNVCKARGESNIEVVKVTKLD
AENCESEASVSEKVCVKNDTSEVATEECKSSVEPSTETGDRQDVKEVAPEDFCSGVGLCD
NTSPINVEPQTDISEQIAGGKLGDQNESVTASSEEMNTNMENSEEIVINHVSNEIDNVTE
TDENVTTKTKSEMKIEQLNVELDSFVSDTLEMNTEEEKIDSNKTETNIELCKSEETNLDD
NQMVVGNILLEVNHTPDKAEKPTESLTSETAVSELVTENINSSPEKLRELDSLLMSANDS
PSATQTRCVWSPLASPSTSILKRGLKRLQEDEISSPINKVRRVSFADPIYRAGLADDIDR
RCPLVRSHSSNSSPIIRNVKTSPTSQTKHNTTSAKGFLSPGSRNCKFKSSKKCLITEMAK
ESISCLTESVYPPLMNCAAPVDIILPQITSNMWARGLGQLIRAKNIKTIGDLSTLTASEI
KALPIRSPKVSNVKKALRIYHEQQMKSHGLEEIPVFDISEKTLNGIENKSADEERLASDL
IDPAALETPLSKNLVAQISALALQLDSEDLHNYSGSQLFEMHEKLGSMANSIIKNLQSRW
RSPAHENSS
NT seq
7410 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccctaggtgagaatcccctcctgccgctgttggagactttggaagactcttcc
gccttccctggagagcagaccgacgcttacctgaccctgaccagtcgtatgactggagat
gaaggaaaagaagtcgtcatagaaatggagaaaaatcttcctcggttatacaaagtttta
aagactcacatttccaatcaaaactcagagctgagtagtgctgctcttcaagctttgggc
ttttgtttatataatcccaaaattacttcaggattatcagaagcaaatattcaagaattg
ctttcagaactgaatgatattattaaaagttcagacaaaaatgtacgtaccagggctctt
tgggtaatatccaaacagacatttcccaccgaagctgttggcagaatggtatccagtata
attgattcattagaaataatacttactaaaggagagatacattctgctgttgttgatttt
gaagcattaaatgttatcataaggttaattgaacaagctccagttcagatgggagaagag
tcagtaaggtgggctaaactggtcatacctttagtggttcattcagcacagaaggtacat
ttgcggggagccacagctctggaaatgggaatgccattgttgcttcagaaacaacaagaa
atagcaaacattacagagcatcttatgactactaaattaatctcagaactccaaaagcta
tttatgaataaaaatgagacctatgttttaaaattatggcctttgttcgtcagacttctt
ggaaagaccttgcatcgaagtgggagcttcatcaattctttgctacaactggaagaactg
ggatttcgtagtggaacacccatgattaaaaaaatagcttttattgcttggaagagctta
atagataattttgctttaaattcagatatatactgttagtgcacaagactcaagttgtta
atgcagcctttgagttccatccatgtgagaacagaaactctagcattaacaaaactagaa
gtctggtggtatttgctaatgagacttggacctcatctccctgctaattttgaacaggtt
tgtgtgcctctgattcagagcacaataagtgattctagtacttcacctccaggaaattca
tcacgtgtagctgcttctccaggattaagtcctatgactcctgtacacaaaggtgcttcc
ccatatggagttcctgtaactacacggatgaatatgagtacaaatttaggtggaatggca
gcaattccttccattcagcttttgggacttgaaatgctgcttcattttttattgggtcca
gaagtcttaaattttgctaagcaacacaaacttgtattgaacttagaaccacttgaacat
ccgttaatcagcagtccttcttttttttctaaacatgcacatacacttatcactgctgtt
catgacagctttgttgcagttgaagaagatgctctgtacttactttgtttgacagatgca
gttgtcaatgctatctggaaggcgctaattagcctagtgaattcacttactgaatccgga
aataaaaaagagaaaccaggttctgaagtattgactctcctactaaaatctttagaaagc
gtagtgaaatcagaagtacttcctatatcaaaaaccctggtcctcatggaaattacaatt
aaaggacttcctcagaaagtgttaggttcaccagcatatcaggttgctaatatggatatt
cttaatggaactccagctttgttcttaattcagttaattttcagctgttatatacaggaa
tgtggaatagcagatgaaaggttttttctcaacctggaatcacttgtaggctgtgtgctt
tctggtccaacttcaccactggcttttagtgactccgttttaagtgttattaatcaaaat
gcaaagcaattggaaaataaggagcatctctgcagaatgtggagcattatagtcactccg
ttgactgaattgattaatcagaccaatgaagtaaatcaaggtgatgccttagaacataat
tttagtgccatctatagtgcattgactttaccaataaatcatattttttcagcacagaga
tttcctgtggtgaccatgaaggctttacttcgaacttggtcagaactgtatagaatattt
gctcgctgtgctgctttggtagcaactacagaagagaatttgtgttgtgaagaactttct
tctaagataatgtccactttagaagatgaagcctttttgaatttgttgttcttggacaga
atcattcatattattactgtaatagtggattgcattgacttttcaccgtataataataaa
tatcagcccatagttaaatcaccacagaggtcttcagattgggccaaaaagaagaaagag
cccctaggaaaattggcctctttgtttaaacttactgtaagagtgatttgttcgttccat
accttgagcttcaaagaaacacattctgatactctgcttggtattggcaactcaatcatc
aacatgatttccaatctccttggacatatttctttgccttctgtgattcgaaaaatattt
accgtattaacaagacccttggcattattttatgaaaattccaaccttgatgaagttcct
aaagtgtatagttctctgaacaacaagttagaaaagctactaggagaaattgttacttgc
ctgcaattcaacgctgggacctttgacagtgaacttcttgaacagctctccccactgtta
tgcataatatttctgcacaaaaataaacagattcgaaagcagtgtgctcagttctggaat
gccacatttgctaaagtgatgatgttgacttatcctgaagagttgaaaccagtactaaga
gaagccaaacagaaagttttgcttctattgcctggtttggaaaatgttgaaataatggaa
gaatccagtgcatcatactcagatgcaacagaaaattcacaattaaatatcaagataagt
ggtttggaaagaaaatcaaatggaaaaagggattcctttttggcacaaacaaagggaaga
aaagaaaatgtgaagctgtctgccaaactgaaacgagagtcttcatctctaagagtaaaa
agtgaacctcttttggaagaggaaaagtctactgattttgtgttgatacctccagaagga
aaagaatcaaaggaaagaatactaactgaacatcaaaaagaagtactcaagacaaagcgg
tgtgatattcctgccatgtataataatctggatgtttcacaagatactgtatttactgat
cactatagtcaggaagactctgtacaaactcctactttaactgaaaaaccaaaggaggat
accaaggtggtgactaaggaagaacaaatgaagagtgacactgtcattcaagatgccttg
gaaaactgtggtatggatgaacatgtcaaaaaggcttctttttcaaataatgagtgtggt
tttgttcccaaaaccaatccagaaataatgagcggtagtaacgaagccagaaaaaacagt
ttaatttcatcaaagaaaacgtcaacagaatgtgcatctagtgcagaaaattcattagtc
agcagtcaatcaatttctgatgccagtatttctgaaactcccccacaaactacaagtcgg
aggcaaagttttattaccttggagaagttcgatggttcagagaatagacctttcagtgta
ccctctttgagcagtatgtcgtcaaatactttggtgcagaatagccaggaaaacatgact
acaacagataatacatcaaaaacaaataagagagaaatgatgcattcaaaatctgattct
gaaaagaaccttcatggaattaggaaatcaagccggagattgagtaaagttgagaagtca
gcaagtaaaagatctaaacccttaataaaatctcaacaggaggaaaatcaagaattggtt
gaaggcactatatctttagaaaataattcacctgtcttttttaatcaaacagactgttca
tcagatggtcagactcatatttctgactctgttccagagcatgaagatagaagacccaaa
ctaacattagaaaatactgtgttattggaaaacggtactgtccaagacaaaaacatgggg
attaatttagaatccaaagaaaatacacctccagcgcaacccccagcagatcagatagta
aatgaagatagtcaggttcaggtaactccaaatcaaaaaactctgagacgatcatcaagg
cgacgttcagaaataacagacgctgttggtgataaccaagataaagaaaatagtcatcaa
aaaaaggaaagacataaggaagaggaaaaacttcagggcttattgcatgtaaaagatgat
gtgttacctaaacagaaactgacttacgaacaaactgggcaggaaaacttacttgagaaa
gaaagtaatttacatgagaaggcttgtggtgaaaccagtgttaatgctgacattgatcaa
agtaaaagaaaaccagaccttgagaatgttaattctcagggagatagtgccctggacatt
gtagataagtcctctgagagacctttaagaggacgaacacgttaccaaacaagaaggtta
tctcagggtttgctttctagcattgaaaactcagaatctgatagttctgaggcaaaagaa
gaaggttctaggaagaagagatctggaaaattgaaaaacaaaaacaatgacagtattgat
actgaacaagaggaaaaaatcacagaagaggaatctggaagtgtcacgaatcatacacaa
gattataaagcaatttctgagatagatgtagacaaaaagcctcaggttcttgaaaaaggt
cagagtaatactataatacttcaggattctaaaacatctgtgggcatgttgcaagtttct
gttgatgtgccaaacacatgcgaggaaagagtcaagactaccaaatgtttagagtcttcc
tttgcaagttcgcctatgccagaatcaaatttaaagactagaaatgccagtaagagatca
gttaagcaagattctgataacagtgtgggagaatgctctagaattggggcatcagaaatg
tctacactttctgaaaaaaatgtccagacaattgaatgccaccataagagaagtaggagg
gtgagaagatctaaaggttgtgactgctgtggggaaaaatctcaacctcaggaaaagtca
cccattgggttaaggaacacagaaaatactgacataaagagcagtgaaataaagaccagt
gtgcaaacacctgacacagtattagaaacagattctaaagctaatttgtgttctgaagtg
aaagttttagatgaacgtgcaagtgtgagttttagtttggttctcaaggggaatgacact
attaatgattctgtattgggacctgaaactgagttgaaaaaaaatactattcaaaagtct
tctgaaataataagtttgaaagaaaaagcttgtgatacaaattctggtgaagcatgtgat
acaaattctggtgaagcactgtgtcctgaaagtgaagaaccatctaataaaaagtttaaa
gctgaagacccatgtttagagaacagcaaggacatttcagaggcatatcatttggatacc
acaggagaaaacccagaaacaacactaaaaatagaacttaatgttgttaatattaaagga
aatgtatgtaaagcaagaggagaatccaatatagaggttgtaaaagttaccaaattagat
gcagaaaactgtgaatctgaagctagcgtctctgaaaaagtgtgtgtcaaaaatgacact
tctgaagtggcaacagaggaatgtaagagtagtgttgaacctagcacagaaacaggtgac
agacaagatgtcaaagaagtggcacctgaggacttttgttcaggtgttggcctttgtgat
aacacctcacctataaatgtggaacctcagactgacatatctgaacaaatagcaggtggt
aaactaggtgaccaaaatgagtcagttacagcctcatctgaagaaatgaatactaacatg
gaaaattctgaagaaatagtgattaatcacgtgagtaatgaaattgacaatgtcacagaa
acagatgagaatgtaactactaaaactaagtcagaaatgaaaatagaacagttgaatgta
gaacttgacagttttgtttctgacacacttgaaatgaacactgaggaagaaaagattgac
tctaataaaactgaaactaatattgaactttgtaagtctgaagaaacaaatttagatgac
aatcaaatggtagtgggaaatattttattggaagttaatcatactccagataaagcagaa
aaaccaacagagtctttgacatctgaaacagctgtctctgaactagtaacggaaaacatt
aattcatctcctgaaaaactgagggaacttgattctttgctcatgtcagcaaatgacagt
cctagtgccacacagacacgctgtgtctggtctcctttggcttctccatctaccagcatt
ttaaaaagaggactaaaacgacttcaagaagatgagatctcatcacctattaacaaggtt
cgccgtgtctcctttgcggatccaatataccgagcagggttggcagacgacattgatagg
cgatgccctcttgttaggtctcattcttcaaatagttcacctataataagaaacgttaaa
acttcacctacttcacagacaaagcataataccacttcagccaaaggatttctgtctcca
ggatcacgtaactgtaaatttaagagctcaaagaagtgtttaattacagaaatggccaaa
gagtccatatcatgcctcacagaaagtgtttacccacctttgatgaattgtgcagcacca
gttgacataattttacctcagattacctctaacatgtgggcaagaggtctaggacaactc
atcagagcgaagaatataaaaactattggggatttgagtactcttacagcatcagaaata
aaagctcttcctattcgttctccaaaagtatcgaatgtaaaaaaagctctcagaatatat
catgaacagcagatgaaatctcatggacttgaagaaattccggtttttgatatttctgag
aaaacactaaatggaatagaaaataaatcagctgacgaagaaagacttgcctcagatttg
atcgatcctgctgctttagaaactccattatcgaaaaatcttgtggcacaaattagtgct
cttgcgcttcagttggattctgaggatctccataactattcaggaagtcagctatttgaa
atgcacgagaaacttggttctatggcgaactctataataaaaaatctgcagtcacgttgg
agatcaccagcccatgaaaattctagttag
DBGET
integrated database retrieval system
