Curtobacterium poinsettiae: OE229_04555
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Entry
OE229_04555 CDS
T10347
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
cpoi Curtobacterium poinsettiae
Brite
KEGG Orthology (KO) [BR:
cpoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpoi03016
]
OE229_04555
Enzymes [BR:
cpoi01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
OE229_04555
Transfer RNA biogenesis [BR:
cpoi03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
OE229_04555
Prokaryotic type
tRNA splicing ligases
OE229_04555
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
LppC
Motif
Other DBs
NCBI-ProteinID:
UYC81739
UniProt:
A0A9Q9T4J5
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All DBs
Position
911588..912754
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AA seq
388 aa
AA seq
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MKKINDRLLSWASMLEDNTEQQARTTARMPFVFPHLALMPDAHLGLGATVGSVIPTLGAI
MPAAVGVDIGCGMIAVRTQFTATDLPADLQGLREQIERAIPLSAGASNRKIVATAAPRIA
ELEAMAETAGFEPDGVHGGWRNQLGTLGSGNHFIEVSLDEQDRVWLFLHSGSRGVGNKIA
QRHITVAKKAMERWWIQLADPDLAYLVEGTPEFDRYIAELRWAQHFALLNREEMMDRVVR
QLSEAVGTSVDERERINCHHNFTQRETHWGKSVWVSRKGAIQAKAGQPGLIPGSMGTASY
VVEGLGNKPSLESSPHGAGRLFSRSAARRTFTHEQLREAMTGIEYRDTDAFLDEIPAAYK
PIDQVMADASDLVSIRHTLRQVVNVKGD
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagatcaacgaccgattgctcagctgggcctcgatgctcgaggacaacaccgag
cagcaggcccgcacgaccgcgcgcatgccgttcgtgttcccgcacctggccctcatgccc
gacgcacacctcggcctcggggccaccgtcgggtccgtcatcccgaccctcggcgcgatc
atgccggcggccgtcggcgtggacatcggctgcggcatgatcgcggtccgcacgcagttc
accgccaccgacctgcccgccgacctgcaggggctgcgcgagcagatcgagcgcgcgatc
ccgctgtcggccggtgcgtcgaaccggaagatcgtggcgaccgccgcaccccggatcgcc
gagctcgaggcgatggccgagaccgccgggttcgagcccgacggcgtgcacggcgggtgg
cggaaccagctcggcaccctcgggtccggcaaccacttcatcgaggtctccctcgacgag
caggaccgggtctggctcttcctgcactccgggtcgcgtggcgtcggcaacaagatcgcg
cagcggcacatcacggtcgccaagaaggcgatggagcggtggtggatccagctggcggac
cccgatctggcgtacctcgtcgagggcacgccggagttcgaccggtacatcgccgagctc
cggtgggcccagcacttcgcgctgctcaaccgcgaggagatgatggaccgcgtcgtccgg
cagctgtccgaggccgtcggcacgtccgtcgacgagcgcgagcggatcaactgccaccac
aacttcacgcagcgtgagacgcactggggcaagtccgtgtgggtgtcgcgcaagggtgcg
atccaggcgaaggccggtcagcccggcctgatccccgggtcgatgggcaccgcgtcgtac
gtggtcgagggactcggcaacaagccctcgctcgagtcgtccccgcacggtgccggccgg
ctgttctcgcggagcgcggcccggcggaccttcacccacgagcagctgcgcgaggcgatg
accggcatcgagtaccgcgacaccgacgcgttcctcgatgagatcccggcggcgtacaag
ccgatcgaccaggtgatggccgacgcgtcggacctcgtgtcgatccggcacaccctgcgg
caggtcgtcaacgtgaagggcgactga
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