Curtobacterium poinsettiae: OE229_06430
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Entry
OE229_06430 CDS
T10347
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cpoi Curtobacterium poinsettiae
Pathway
cpoi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpoi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OE229_06430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpoi03019
]
OE229_06430
03009 Ribosome biogenesis [BR:
cpoi03009
]
OE229_06430
Enzymes [BR:
cpoi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
OE229_06430
Messenger RNA biogenesis [BR:
cpoi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
OE229_06430
Ribosome biogenesis [BR:
cpoi03009
]
Prokaryotic type
rRNA helicases
OE229_06430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
HEM4
adh_short
UvrA_inter
Motif
Other DBs
NCBI-ProteinID:
UYC82097
UniProt:
A0A9Q9PB03
LinkDB
All DBs
Position
1290380..1292209
Genome browser
AA seq
609 aa
AA seq
DB search
MSTDTTPTTETLDDGPVVTFAGLGLSDAVLKAVKDIGYETPSAIQEATIPTLLAGRDVVG
LAQTGTGKTAAFALPILSRMESGSKKPQALVLSPTRELALQVCEAFEQFASHMKNVHVLP
VYGGQAYGVQLSALRRGVDVVVGTPGRIMDHLAKGTLDLSELKYLVLDEADEMLKMGFAE
DVETILADTPDDKQVALFSATMPAQIRRISQQYLTDPAEITVKTKTKTAANITQRYLMVS
YPQKVDALTRILEVEDFEGMIIFVRTKSETETLAEKLRARGYAAAAISGDVAQAQRERTV
NQLKSGKLDILVATDVAARGLDVDRITHVVNFDIPVDIESYVHRIGRTGRAGRSGDSISF
VTPRERRLLSAIERHTKQPLTQMQLPTIDDVNETRLTRFDDAITAALEDQGRIAAFRDVI
AHYVEHHDVPSDDVAAALAVVAQGDSPLLLTAADDALRTQMERDARRSERDERGARDDRG
GRSDRGDRGGDRDRGDRGDRGPRRSQPMSPYRIEVGRRHRVEPRQIVGALANEGGLRRDD
FGAIQIRPDFSIVELPADMDPGVLERLTDTRISGKLIEIRADRRGGGRRSDDRAPRGDRD
DRPERRPRY
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggacaccaccccaaccactgagaccctcgacgacgggcccgtggtgacgttc
gccggtctcggcctgagcgacgctgtgctcaaggccgtcaaggacatcggctacgagacc
ccttccgccatccaggaagccaccatccccacgctcctcgccgggcgcgacgtcgtcgga
ctggcgcagaccggtaccggcaagaccgcggccttcgcgctgccgatcctgtcccgcatg
gagtccggcagcaagaagccccaggcgctcgtgctgtccccgacgcgtgagctcgccctg
caggtgtgcgaggcgttcgagcagttcgcgtcccacatgaagaacgtgcacgtcctgccg
gtctacggcggccaggcctacggcgtgcagctgtccgccctgcgccgtggcgtcgacgtc
gtcgtcggtacccccggccgcatcatggaccacctggcgaagggcacgctcgacctgtcc
gagctcaagtacctggtgctcgacgaggccgacgagatgctcaagatgggcttcgccgag
gacgtcgagacgatcctcgccgacacccccgacgacaagcaggtcgcgctcttctcggcg
accatgcccgcgcagatccgccgcatctcgcagcagtacctgaccgacccggccgagatc
accgtcaagaccaagacgaagaccgccgcgaacatcacgcagcgctacctgatggtctcg
tacccgcagaaggtcgacgcgctcacccgcatcctcgaggtcgaggacttcgagggcatg
atcatcttcgtccgcaccaagagcgagaccgagaccctggccgagaagctccgtgcccgc
gggtacgcagccgccgcgatcagcggtgacgtggcccaggcccagcgcgagcgcacggtc
aaccagctgaagtcgggcaagctcgacatcctggtcgcgacggacgtcgccgcccgtggc
ctcgacgtcgaccgcatcacgcacgtcgtgaacttcgacatcccggtcgacatcgagtcc
tacgtgcaccgcatcggccggaccggtcgcgccggccgctcgggtgactcgatcagcttc
gtcaccccgcgcgagcgtcgcctgctgtccgcgatcgagcgtcacaccaagcagccgctc
acgcagatgcagctgccgaccatcgacgacgtcaacgagacccgcctgacgcgcttcgac
gacgccatcaccgcggcgctcgaggaccagggccggatcgccgccttccgcgacgtcatc
gcgcactacgtcgagcaccacgacgtcccctcggacgacgtcgccgctgccctggccgtc
gtggcgcagggcgactcgccgctgctcctcaccgcagccgacgacgccctccgcacccag
atggagcgcgacgcccgtcgcagcgagcgcgacgagcgtggtgcccgcgacgaccgtggc
ggccgcagcgaccgcggcgaccgtggtggcgaccgcgaccgtggtgaccgcggcgaccgc
ggcccgcgccgttcgcagccgatgtccccgtaccgcatcgaggtcggccgtcgtcaccgc
gtcgagccgcgccagatcgtcggtgccctggccaacgaaggtggcctgcgccgcgacgac
ttcggtgcgatccagatccgtccggacttctcgatcgtcgagctgccggccgacatggac
cccggtgtgctcgagcgcctcaccgacacccggatcagcggcaagctcatcgagatccgt
gcggatcgccgtggtggcggtcgccgctcggacgaccgcgccccgcgcggtgaccgcgac
gaccgtccggagcgcaggccgcgctactga
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