Chitinophaga pollutisoli: WJU16_00455
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Entry
WJU16_00455 CDS
T10245
Name
(GenBank) peptidase domain-containing ABC transporter
KO
K20344
ATP-binding cassette, subfamily C, bacteriocin exporter
Organism
cpol Chitinophaga pollutisoli
Pathway
cpol02010
ABC transporters
cpol02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cpol00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
WJU16_00455
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
WJU16_00455
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cpol01002
]
WJU16_00455
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpol02000
]
WJU16_00455
Peptidases and inhibitors [BR:
cpol01002
]
Cysteine peptidases
Family C39
WJU16_00455
Transporters [BR:
cpol02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
WJU16_00455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_29
AAA_16
AAA_21
AAA_30
RsgA_GTPase
AAA_25
DUF87
GspA_C39-like
AAA_23
DLIC
ATPase
nSTAND1
Motif
Other DBs
NCBI-ProteinID:
WZN41507
LinkDB
All DBs
Position
complement(128435..130612)
Genome browser
AA seq
725 aa
AA seq
DB search
MSTNTRLKKSTRVRQRDLSDCGAACLASVAAFYNLELPVARIRQMAATDSKGTNVLGMVE
AATRLGFQAKGVKGPFEALYNIPKPAIAHVVVKGVLHHYVVIYRVTKTEVVVMDPADGQF
HHIPHEAFKQMWTGILVILMPGDEFKAGDERISHLARFWFLLRPHKAVVMQALFGAIIYT
VLGLSTSIYVQKIVDNVLVEGNRNLLNLLGIIMILILLLQLFIGHLKSVFALKTGQQIDA
RLILGYYKHLLRLPQQFFDTMRVGEITSRINDAVKIRVFINDVAIGLVVNVFIVFFSFAL
MFTYYWKLALLVLAILPVYGLIYWISNQVNKKMQRRLMEDNAELGSQLVESLNSVATIKR
FGLEEFANIKTESRFVRLLKTIYSASVSNLYLGNASSFATNALVVILLWAGSYFVMDRQL
SPGELLSFYALIGYFTGPAMSLIGANRSMQDALIAADRLFEIMDLEQEDTANKVALAPEM
VGDIHFQRVSFRYGTRVEVFRQFDLHIPHGRITAVVGESGSGKSTLMALLQNIYPLMDGS
ILIGQLDIRYIDNESLRRQVSAVPQQIDLFAGSVLENIAVGEFEPDVQRVLQVCKLLGIL
QFIEKLPEGFNTPLGEHGVNLSGGQRQRIAIARALYRDPQVIILDEATSSLDSVSDQYVQ
DAMQQLRDQGKTIIVIAHRLSTVVSADKIVVLQEGKLVEEGTHAELLSNNAVYARLWQHH
QAVLA
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaacacccgactcaagaaaagcacccgcgtccgccagcgggatctaagcgat
tgcggcgccgcctgcctggcctccgttgcagcgttttacaacctcgaattacccgtggcg
cgcatccggcaaatggcggctaccgacagcaaaggcaccaacgtgctgggaatggtagaa
gccgctacccgactgggttttcaggcaaagggcgtaaaaggcccgtttgaagcgctgtac
aatatcccgaagcccgccatcgcgcacgtggtggtaaaaggtgtgctgcaccattatgtg
gtgatctaccgcgtcacgaaaacggaagtggttgtgatggacccggccgacgggcagttt
catcatatcccgcacgaagcgttcaagcaaatgtggaccggcatcctcgtgatcctcatg
ccaggcgatgaattcaaagccggcgacgaacgcatctcacacctggcgaggttctggttc
ctgctgcggccgcacaaggcggtggtgatgcaggctttgttcggcgctatcatttatacg
gtattgggattatccacttcgatttacgtccaaaagatcgtcgacaatgtgctggtggaa
ggcaaccgcaacctgttgaacctgctggggattatcatgatactgatacttttgctccaa
ttgttcatcgggcacctgaaaagtgttttcgcattaaagacgggccagcagatcgatgcg
cggctgatcctgggatattacaagcatctgctccgcctgccgcaacagttcttcgatacg
atgcgggtgggggagatcacctcacggatcaatgacgcggtgaaaatccgcgtattcatc
aacgatgtggcgatagggctggtggtgaacgttttcatcgtatttttctcattcgcgctc
atgtttacctattactggaaactggcgctccttgtgctggcgatcctccctgtatacgga
ttgatttactggatcagcaaccaggtcaataaaaaaatgcagcgcaggctgatggaagac
aatgccgagttagggagccagctggtggaatcccttaattcagtagccaccatcaagcgc
ttcgggcttgaggagtttgcgaatatcaaaaccgaatcccggttcgtaaggttgctgaaa
acgatctattcggcgtcggtttccaatttatatctcggcaacgccagtagttttgcgaca
aatgcgcttgtggtgatattattatgggcggggtcttacttcgtgatggaccggcaattg
agccccggcgagttattgtcgttttatgcattgatcgggtactttacgggcccggccatg
agccttatcggcgcgaaccggagcatgcaggatgcgctgatcgcggccgacaggttgttc
gagatcatggacctggagcaggaggatacggccaataaagtggcgctggcgccggagatg
gtgggtgacatacatttccagcgggtgagcttccggtatggtacgcgcgtggaggtattc
cggcagttcgatctgcatatcccgcacggccggatcacggcggtagtgggcgagagtggc
agcggaaaatcaacgctgatggctttgttgcagaatatttacccgttaatggatggcagc
atcctcatcgggcaactggatatccgctatatcgataacgaaagtttacgcaggcaggtg
tctgccgttccgcagcagattgatttgtttgcgggatcggtgctggagaatattgcggtg
ggcgaatttgagccggatgtgcagcgcgtgttgcaggtctgcaagttgctgggcattctt
cagtttatcgaaaagttgccggagggcttcaatacccccctgggcgagcatggcgtcaac
ctcagcggcggccagcggcagcgcatagctatcgccagggcgctgtaccgggatccgcag
gttattatattggatgaagctacttcttccctcgattccgtttctgatcagtatgtgcag
gacgcgatgcagcagctccgcgaccagggtaaaaccatcatcgtcatcgcccaccggctc
agtacggtagtgagcgcagataaaatagtggtattgcaggaaggaaaactggtggaggaa
ggaacgcacgccgaattgctatcgaacaacgccgtttatgcacggttgtggcagcatcac
caggcggttttggcgtga
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