Chitinophaga pollutisoli: WJU16_03105
Help
Entry
WJU16_03105 CDS
T10245
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
cpol Chitinophaga pollutisoli
Brite
KEGG Orthology (KO) [BR:
cpol00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpol02000
]
WJU16_03105
Transporters [BR:
cpol02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
WJU16_03105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
TPR_12
Motif
Other DBs
NCBI-ProteinID:
WZN42024
LinkDB
All DBs
Position
complement(738717..740135)
Genome browser
AA seq
472 aa
AA seq
DB search
MTTWMLKYSNLFIVLLISLIISSCDKILEIDPPVQTITNETAFSDSITATASVMGAYRLM
SGRNGIFSNGIQTIALGLYADELIASNTQDQFYEFYTGRIPPQNGIIVSSFWQYLYQMIF
SANLSIEQLDVSKGLTYSIRQSLTGESKFIRALAYIYLSSNFGEVPLILKSDFRNNINVA
KSKREDVINQIRADLLEAVRLLPIDYSFAQGQRVRANRYAAMALLARLELFEGNYESALK
YCNDIISNSELYGLADHPSLVFNKNNIEIILQLHADSNLPPYGVTGEAAYLIPGVGGAPR
YLVSVGLLSSFESEDQRKSAWIDSAKYLGKYYKYPRKYRLGTGMGRPNVDVPQFYTLIRL
AEIYLIRSECLFRKGDLSGSVEDLNRIRNRAGLQDLPEDIALEGLFLAIVEERRHELFSE
LGHRWQDLRRWGLIDSVNLANKTGWESYRRVFPLPFEELLRNVSLKQNVGYN
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgactacttggatgttaaaatactcgaacctttttattgtattgttgatctcactaatt
atatcatcgtgtgataaaattctggagattgatccacccgttcagacaataactaacgaa
actgctttttctgatagtattactgcaactgcatcggtaatgggggcttatcgattaatg
agcggtagaaatgggattttttctaatggtattcaaactattgctcttggtttatatgct
gatgagttgatcgcaagcaatacgcaggatcaattttacgagttttatacaggaagaata
cctccacagaatggtataatagtttcttcgttctggcaatatttatatcaaatgattttc
agcgcaaatctgtctattgaacaattggatgtttcaaaaggattgacttattcaataaga
caatcattaactggcgaatctaaatttatccgggctttagcatacatttacctgtcctct
aattttggcgaggttcctttaatcctgaaatctgatttcagaaataatattaatgttgca
aagagtaagagagaggatgtaataaaccagattcgagcagatttattggaagctgtgaga
ttgttgccaattgattacagctttgctcaaggccaaagggtacgagcaaaccgttatgca
gcaatggctttacttgctcggttggaattgtttgaggggaattatgagtctgctttaaag
tactgtaatgatatcattagcaattcagagttatacgggttggcagatcatcccagccta
gtgtttaataaaaataacattgagataattttacagttacatgcggatagtaacttgcca
ccatatggcgttacaggagaggctgcatatttgattccgggtgtaggtggagcacctcgt
tatttagttagtgtaggattgctttcgtcttttgaaagcgaggatcaaagaaagtctgca
tggattgatagtgcaaagtacttagggaagtactataaatatcctagaaagtataggttg
gggactggtatgggtaggcccaatgtggatgtgcctcaattttacacattgatacgtctg
gctgaaatttatttgataagatctgaatgtctatttaggaagggtgatttatcgggatca
gtagaagatctaaatagaattaggaatcgagcgggtttgcaagatctgccagaggatatt
gctttagaaggactctttcttgcgattgtggaggagagaagacatgagttgttttcggaa
cttgggcaccgttggcaagacttgagaagatgggggctaatagatagtgtcaatttggct
aacaagactgggtgggaatcgtatcgtagggtttttcctttgccctttgaggagttacta
cgaaatgtttcattaaagcaaaatgttggttacaattag
DBGET
integrated database retrieval system
