Chitinophaga pollutisoli: WJU16_04480
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Entry
WJU16_04480 CDS
T10245
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
cpol Chitinophaga pollutisoli
Brite
KEGG Orthology (KO) [BR:
cpol00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpol02000
]
WJU16_04480
Transporters [BR:
cpol02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
WJU16_04480
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
Motif
Other DBs
NCBI-ProteinID:
WZN42290
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Position
1034305..1036068
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AA seq
587 aa
AA seq
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MKKYLIFLSACSALLTVASCTGDFLDRPPLTQIENEAYWKTASDLEKYTLQFYPDFPSFG
VVGSYMGLIGWDGTRGSDVQISASPATLWNGTNQPVTAGGNWTWTKIRSVNVFFENYAKC
KDPLVKYQQFLGEAHFFKAWYYFEKVRAYGDVPWYTTPLEMDDPALYKPRDPRTQVVDSI
LWHLDKAVENLNPLKSSDGGNNRLTKEAALLFKSRVALYEGTWQKYHRGTEFGTEGADPG
KYLRAAVNAAEELMKPVYNLTLFSTGDPENDYRVLFSLINQSGNKEVILWKAYAVNLQLS
HSFQIYVSDRTAGISMTMQQVYQYLDRNGNAYDYFNTGKTVKGNAFLTKIATECDPRLSQ
TIWVPGGVMWDNSFGKGVFTFPYLDKSGETLNNTGFQIRKGNDPKDPQAGSGVSWNTSCE
TGAIVFRYAEALLNYAEAKAELQEAVDYNKSVNLLRSRAGMPAFKVQGDPNRLQYADYGY
PLSDELHEIRRERAVELGAEGFRYDDIRRWAAHKLMKGKRPKGYPFDKDEWTGKKINYAP
DADGFLDPFATAIPNGYGFNEKRDYLECIPLNEITLNPKLQPNNPGW
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatacctgatcttcctatcggcatgcagcgcactgctcacggtagcttcctgc
accggggatttcctggataggccaccattaacccagatagaaaatgaggcttactggaaa
acggcgagcgacctggagaaatatactttgcaattttatcccgacttcccctcgttcggc
gtagtcggcagctatatgggattgatcggctgggacggcacccgtggatcggatgtacag
atttcggcttcgccggccaccttgtggaacggcaccaatcaaccggtaacagccggcggc
aactggacctggacgaagatccggagcgtcaatgtcttcttcgaaaattatgcgaagtgt
aaagacccgctggtaaaataccagcagttcctcggggaagcccatttcttcaaggcctgg
tattatttcgaaaaagtgagggcatacggcgatgtgccctggtatacgacgccgctggag
atggacgatcccgcgctctacaaaccacgcgacccgcgcacccaggtagtggattccatc
ctgtggcacctcgacaaagccgtggaaaacctgaatccgctaaagagcagcgacggcggg
aacaacaggctcacgaaagaagcggcgctgctgttcaaatcgagggtagcgttgtatgaa
ggcacctggcagaaatatcaccgcggcaccgaattcggtacggaaggcgccgacccggga
aaatacctgcgggctgccgtgaacgccgcggaagagctgatgaaacccgtgtataactta
acgcttttttcgaccggggatccggagaatgattaccgcgtgttgttctcgctgatcaat
caatccggcaataaggaagttatcctctggaaggcgtatgccgtcaatctccagctatcc
cattccttccagatctacgtatccgaccgtaccgcaggtatttccatgaccatgcagcag
gtgtatcaatatctcgacaggaacggaaatgcttatgactatttcaataccggcaagacg
gtgaaaggcaatgccttcctgacgaaaatagcaacggaatgcgatccccgcctgtcacag
accatatgggtaccgggcggtgtgatgtgggacaatagtttcgggaaaggagttttcacg
ttcccttacctcgacaaatccggcgaaacgctgaataatacggggttccagatcaggaag
ggaaatgaccccaaagacccgcaggcaggcagtggcgtttcctggaataccagctgtgaa
acgggcgcgatcgtgttccgttatgcagaggcgttgctgaattacgccgaagccaaggcg
gaactgcaggaagccgtggattacaacaaatcggtcaacctgctgagaagccgggctggc
atgcccgcattcaaggtgcagggtgatcctaaccggttgcaatacgcggattatggttac
cccttgtcggacgagttacacgagatccggcgtgagcgcgcggtggaactgggggccgag
ggtttccggtacgacgatatccggcgatgggccgcgcataagctgatgaaaggcaaacgc
ccgaaaggttatcctttcgacaaagacgaatggacgggcaagaaaatcaattacgccccg
gatgcggatggattcctggacccgtttgccaccgccattcccaatgggtatgggttcaat
gaaaaaagggattatcttgaatgtattccgctcaacgagatcactttgaatcctaaactc
caacctaataatcctggctggtaa
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