Chitinophaga pollutisoli: WJU16_07210
Help
Entry
WJU16_07210 CDS
T10245
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cpol Chitinophaga pollutisoli
Brite
KEGG Orthology (KO) [BR:
cpol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpol03032
]
WJU16_07210 (topA)
03400 DNA repair and recombination proteins [BR:
cpol03400
]
WJU16_07210 (topA)
Enzymes [BR:
cpol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
WJU16_07210 (topA)
DNA replication proteins [BR:
cpol03032
]
Prokaryotic type
DNA Topoisomerases
WJU16_07210 (topA)
DNA repair and recombination proteins [BR:
cpol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
WJU16_07210 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
SHOCT-like_DUF2089-C
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
WZN42821
LinkDB
All DBs
Position
1769471..1771822
Genome browser
AA seq
783 aa
AA seq
DB search
MAKNLVIVESPAKAKTIEKILGKDFEVKSSFGHIRDLEKDDMGIDIQNNFKPKYIIPDDK
EKVVKELKKLVKDSDEVWLATDEDREGEAISWHLCEVLGLDPASTKRIVFHEITKPAIEK
AVRTPRLLDMNLVNAQQARRILDRIVGFELSPVLWRKMSMRNSLSAGRVQSVAVRLIVER
EREINQFETVSSFKVEAWFLAKDIQGRTIAFKADGPSRFKTAEDAEKFLSQCVGAAYTVK
DVTVKPGKKSPAAPFTTSTLQQEASRKLGYSVSKTMLLAQKLYESGQITYMRTDSVNLSD
TAMEDISKAIHKNWGERYYQSRKYKNKNENAQEAHEAIRPTYMENASVDDSDLKRLYELI
WKRTIASQMSDAELEKTIAKIDISTNHEELTASGEVLKFDGFLKVYMESRDDEDAEEDDQ
EGVLPPLAVKQALEMKEMKATERFTRPAPRYTEASLVKKLEELGIGRPSTYAPTITTIQK
RGYVEKRDKEGVKRDFRILWLKNDQISKVTDQENTGAEKAKLFPTDLGMLVTDFLKQYFD
RVMDYGFTARIEEEFDEIAGGKKKWNNMLQDFYAPFHHNVEETLEKAERVKGERLLGEDP
ASGKPVTARMGRFGPMVQIGKVEDEEKPRFAKLKQTQSIETITFDEAMDLFRLPRNLGLF
EGTEVSVNIGRFGPYAQHDKKFYSLKKEMDPYTVELEEVAPLIVEKRQAKDERTIKVFEK
EKIQVLRGPYGPYLKVGLRNYKLPKEKHETAADITVEEAKAIIEELKANPPKKKAPPRKK
KAD
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaaatctcgtgattgtagaatccccggcaaaggcgaagactatagaaaaaata
ttaggaaaagattttgaagtgaaatcttcattcggccacatccgtgacctggagaaggat
gacatgggaatcgacattcagaataatttcaagccgaaatatataataccggatgacaag
gaaaaggttgtcaaggaattaaaaaaactggtgaaggactccgacgaggtttggctggca
acggatgaggaccgcgaaggggaagccatatcctggcacctttgcgaagtactcggcctg
gaccccgcctctaccaaacgcattgtatttcacgagattacgaaacccgccatcgaaaaa
gccgttcgtaccccccgcctgctcgacatgaacctggtgaatgcccagcaagcccgccgc
atcctcgaccggatcgtgggctttgagctttcgcccgtgctctggcgcaaaatgagcatg
cgcaactcgctgtctgccggccgtgtgcaatccgtagccgttcggctgatcgtggagcgc
gagcgcgagatcaaccagttcgagaccgtcagcagctttaaagtggaagcctggttcctc
gccaaggatatccaggggcggaccatcgccttcaaggccgacggcccctcccgcttcaaa
accgccgaagacgccgagaagttcctctcccaatgtgtgggcgccgcctatacggtgaaa
gacgtgacggtaaaacccgggaaaaaatcccccgccgcaccgttcaccacctccaccctc
cagcaggaagcctcccgcaagctgggctacagcgtgtccaaaaccatgctactggcgcag
aaactctacgagtccgggcagatcacctacatgaggaccgactccgtgaatctctccgac
accgccatggaagatatcagcaaagccatccataaaaactggggcgaacgctactatcaa
tcccgcaaatacaaaaacaaaaacgaaaacgcgcaggaagcccacgaagccatccgcccc
acctacatggaaaacgcctcggtcgacgattccgacctcaagcggctctatgaactgatc
tggaaaaggacgatcgccagccagatgtcggacgcggaactggaaaaaaccatcgccaaa
atcgatatcagcactaatcacgaagagctgaccgccagcggtgaagtgctcaaattcgac
ggcttcctgaaagtatatatggagagccgcgacgacgaagacgcggaagaagacgaccag
gaaggcgtattgcccccgctggccgtgaaacaggcgctggaaatgaaggaaatgaaagcc
accgaacgcttcacccgccccgctccccgctatacggaggcttcgctggtgaaaaagctc
gaagagctcggcatcggccgcccttccacctacgcccccaccatcaccaccatccagaaa
cgcggttacgtggagaagcgcgataaagaaggggtgaaaagggatttccgcatcctttgg
ctcaaaaacgaccagatcagcaaagtcaccgaccaggaaaacaccggcgcggagaaagcc
aaactcttccccaccgacctcggcatgctggtgaccgacttcctgaaacaatatttcgac
cgggtgatggactacggcttcaccgcccgcatcgaagaagaatttgacgaaatcgccggc
ggcaagaagaaatggaacaatatgctccaggacttctacgcgcccttccatcataatgtg
gaggaaacgctggaaaaagccgaaagggtgaagggagaacgcctcctgggcgaagatccc
gcgtccggcaagcccgttaccgcccgcatgggcaggtttgggccgatggtacagataggc
aaggtagaagacgaggagaagccccgtttcgccaagctgaagcaaacccagagcatcgaa
acgatcacgttcgatgaagccatggacctgttccgccttccccgcaacctgggtttgttc
gaaggcaccgaagtgtcggtgaacatcggccggttcgggccttacgcgcaacacgacaag
aagttctattccctcaaaaaggaaatggacccctacaccgtggagctcgaagaagtggcg
ccgctcatcgtggaaaaacgccaggccaaagacgaacgcaccattaaagtgttcgagaag
gagaagatccaggtgctgagaggcccgtacggtccctacctgaaagtaggactgcgcaat
tacaagctgccgaaagaaaaacatgagaccgccgccgatatcaccgtggaagaagccaaa
gccatcatcgaagagctgaaagccaatcccccgaagaaaaaggcgccgccccgcaaaaag
aaagcggactag
DBGET
integrated database retrieval system
