KEGG   Chitinophaga pollutisoli: WJU16_08465
Entry
WJU16_08465       CDS       T10245                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
cpol  Chitinophaga pollutisoli
Pathway
cpol02020  Two-component system
Brite
KEGG Orthology (KO) [BR:cpol00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    WJU16_08465
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cpol03021]
    WJU16_08465
Transcription machinery [BR:cpol03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     WJU16_08465
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF GerE HTH_Crp_2 HTH_23 HTH_40 DUF6362 Crp HTH_11 HTH_10 HTH_16 HTH_7 HTH_17 TnsD Sigma70_r3 HTH_29 HTH_24 HTH_3 RPA_C HTH_28 HVO_A0261_N
Other DBs
NCBI-ProteinID: WZN43064
UniProt: A0ABZ2YU80
LinkDB
Position
2075986..2076588
AA seq 200 aa
MEDLWGNDPEWLIRLSKGDESAFRDLFSRYHDFIYSFAERMTGSGDIAQDVVQEVFIKLW
LQRSELPQVQNLGGYINRLTRNHILNGLKRMAHEAAILQDIHPSIGTQPALPDASAEARE
LEGLLNAALSQLPPQQQRVYRMSRQEGLKHEEIAAALGISRETVKKHMMAALQTIRGYLL
RHHKIPAFIAAFLAAWLFRK
NT seq 603 nt   +upstreamnt  +downstreamnt
atggaggatctctggggaaatgatccggaatggctgatccggctctcgaaaggagatgaa
tctgctttcagggacctgttctcccggtatcacgattttatttattcttttgcggaacgc
atgaccggatccggcgatatcgcccaggacgtagtccaggaagtattcatcaaactttgg
ctgcagcgatccgaattgccgcaggtgcagaacctgggcggatatatcaaccgcctcacg
cgcaatcacatactgaacggcctgaagcgcatggcccatgaggccgccatcctgcaggac
atccatccttcgatcggtacgcagcccgccctgccggacgccagcgccgaagcgcgcgag
ctggaaggcttgctcaacgccgctctcagccagctgcctccccaacagcagcgcgtgtac
cggatgagccggcaggaaggactgaaacatgaagagatcgctgccgcgctgggcatttcc
cgggaaaccgtcaaaaagcacatgatggccgcgctgcaaaccatccgcggatacctgctc
cgccatcacaagatccccgcgtttatcgccgctttcctggcggcgtggcttttccggaaa
taa

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