Chitinophaga pollutisoli: WJU16_08465
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Entry
WJU16_08465 CDS
T10245
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
cpol Chitinophaga pollutisoli
Pathway
cpol02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cpol00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
WJU16_08465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpol03021
]
WJU16_08465
Transcription machinery [BR:
cpol03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
WJU16_08465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
GerE
HTH_Crp_2
HTH_23
HTH_40
DUF6362
Crp
HTH_11
HTH_10
HTH_16
HTH_7
HTH_17
TnsD
Sigma70_r3
HTH_29
HTH_24
HTH_3
RPA_C
HTH_28
HVO_A0261_N
Motif
Other DBs
NCBI-ProteinID:
WZN43064
UniProt:
A0ABZ2YU80
LinkDB
All DBs
Position
2075986..2076588
Genome browser
AA seq
200 aa
AA seq
DB search
MEDLWGNDPEWLIRLSKGDESAFRDLFSRYHDFIYSFAERMTGSGDIAQDVVQEVFIKLW
LQRSELPQVQNLGGYINRLTRNHILNGLKRMAHEAAILQDIHPSIGTQPALPDASAEARE
LEGLLNAALSQLPPQQQRVYRMSRQEGLKHEEIAAALGISRETVKKHMMAALQTIRGYLL
RHHKIPAFIAAFLAAWLFRK
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggaggatctctggggaaatgatccggaatggctgatccggctctcgaaaggagatgaa
tctgctttcagggacctgttctcccggtatcacgattttatttattcttttgcggaacgc
atgaccggatccggcgatatcgcccaggacgtagtccaggaagtattcatcaaactttgg
ctgcagcgatccgaattgccgcaggtgcagaacctgggcggatatatcaaccgcctcacg
cgcaatcacatactgaacggcctgaagcgcatggcccatgaggccgccatcctgcaggac
atccatccttcgatcggtacgcagcccgccctgccggacgccagcgccgaagcgcgcgag
ctggaaggcttgctcaacgccgctctcagccagctgcctccccaacagcagcgcgtgtac
cggatgagccggcaggaaggactgaaacatgaagagatcgctgccgcgctgggcatttcc
cgggaaaccgtcaaaaagcacatgatggccgcgctgcaaaccatccgcggatacctgctc
cgccatcacaagatccccgcgtttatcgccgctttcctggcggcgtggcttttccggaaa
taa
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