Chitinophaga pollutisoli: WJU16_11645
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Entry
WJU16_11645 CDS
T10245
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cpol Chitinophaga pollutisoli
Pathway
cpol03420
Nucleotide excision repair
cpol03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
WJU16_11645
03430 Mismatch repair
WJU16_11645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpol03400
]
WJU16_11645
Enzymes [BR:
cpol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
WJU16_11645
DNA repair and recombination proteins [BR:
cpol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
WJU16_11645
MMR (mismatch excision repair)
Other MMR factors
WJU16_11645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
PcrA_UvrD_tudor
ResIII
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
WZN43679
LinkDB
All DBs
Position
complement(2841243..2843576)
Genome browser
AA seq
777 aa
AA seq
DB search
MSANYLDGLNERQREAVITLQGPVMIIAGAGSGKTKVLTTRIAHLMRNGVDAFNILSLTF
TNKAAKEMKERVEKILGSNEARNLYIGTFHSVFARLLRSDAPKMGYPSDFTIYDADDAKS
VVKTIINELNLDDKHYKPNLVYNRISAAKNSLIGPEAYQVDYYLQQEDQRASRPLTGKIY
DLYVKRCYKNGAMDFDDLLFKMYQLLKGFPDVLAKYQHKFKYIMIDEYQDTNPAQYEIVK
LLGAVHENICVVGDDAQSIYSFRGATIQNILQFEKDYDDVKVVKLEQNYRSTKSILGVAN
EVIAKNKGQIEKNLWTDNVEGDKIKLVRTNTDNEEGKSVADTIAELKLRNHFANRDFCIL
YRTNAQSRSFEESLRRQAIPYRIFGGLSFYQRKEIKDFIAYLRIISNSRDEEALKRIINY
PVRGIGKTTLEKVAIIANDQNITFWEVLERASEFGFKGGTLEAIANFVIMIQSFRVMLDK
HNAYEVAVQVGKSTGIVKELFNDKTTEGLARYENVQELLNSIKEFTETPTEDGELLDDKS
LGIYLQQITLLTDADNTNDENSDVVKLMTIHASKGLEFPVVFNVGLEEGLFPSGLSINSR
EELEEERRLFYVAVTRAKSRLFITYANSRYRFGQLQQNEPSRFLEEIPEKYLDRSYAGGG
LRNSGAMGGGASWGNMFDKRKAPGAAAGPSRPAQQEPRPRVISSPTAANHTPSANFTADD
PATMEVGMDVEHQKFGFGKIIGLEGAPNNRIATVMFPKAGGEKKIMLNYAKLMIVRQ
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcaaactatttagacggcctgaacgaacggcaacgggaagcggtgatcacctta
cagggtcccgtgatgatcattgccggcgccggatcgggcaaaaccaaagtactgacgacg
cggatcgcccacctgatgcgtaacggggtggacgctttcaatatactttccctgacgttt
accaacaaagccgccaaggagatgaaggagcgcgtggagaagatcctgggcagcaacgag
gcccgcaatctctatatcggcaccttccactccgtgtttgcccgcctcctgcgttcggat
gcgccgaaaatgggatatcccagcgatttcaccatttacgatgccgacgacgccaaaagc
gtggtgaaaaccatcatcaacgagctgaacctcgacgacaagcattacaaacccaatctc
gtatacaaccgcatttccgcggcgaagaacagcctcatcgggccggaagcgtaccaggtg
gactactacctccagcaggaggaccagcgcgccagccgtccgcttaccggaaagatctac
gacttgtacgtgaaacgctgttacaagaacggcgccatggacttcgacgacctgctgttc
aagatgtaccagctgctgaagggcttccccgacgtgctcgcgaagtaccagcacaagttc
aagtacatcatgatcgatgagtaccaggataccaaccccgcccagtatgagatcgtgaaa
ctgctgggtgcggtgcatgaaaatatttgcgtggtgggagatgatgcgcaatccatctat
tccttccgcggcgccaccattcaaaacatcctccagttcgaaaaggattatgacgatgtg
aaagtggtgaagctggagcagaattaccgttccaccaaatccatcctcggcgtcgccaac
gaagtgatcgcgaaaaataaggggcagatcgaaaagaacctttggaccgacaatgtggaa
ggcgacaaaatcaaactggtaaggaccaataccgataacgaggaaggtaaatccgtagcg
gataccatcgccgaactgaagctgcgcaaccacttcgccaaccgcgacttctgcatcctc
taccgtaccaacgcccagagccgttctttcgaggaaagcctccgcaggcaggcgatccct
taccggatcttcggcggcctttcgttttaccagcgtaaagagatcaaggacttcatcgct
tacctgcggatcatttccaactcccgcgacgaagaagccctcaagcgcatcatcaattat
cctgtacgcggtatcggtaaaaccacgcttgagaaagtcgcaattatagccaacgaccag
aatatcactttctgggaagtgctggaaagggcgagcgagtttggtttcaaaggcggcacc
ctcgaagccatcgccaactttgtgatcatgatccagagcttccgcgtgatgctcgacaaa
cacaacgcctacgaagtggcggtgcaggtgggtaagagcacgggaattgtgaaggagctt
ttcaacgataaaaccactgaaggccttgcgcgttacgagaacgtgcaggaactgttgaac
tccatcaaagaattcaccgaaacgcccaccgaagacggtgagctgctcgacgataaatcc
ctcggcatatacctccagcaaatcaccctgctcacggacgccgataataccaacgatgaa
aacagcgacgtggtgaagctgatgacgatccacgcctccaaagggctggaattcccggtg
gtttttaacgtggggctggaagaaggattgttcccgagcgggctttccatcaattcccgc
gaggaactggaagaagagcgccgcctgttctacgtggccgtgacccgcgccaagagccgt
cttttcatcacctacgccaacagccgctaccgtttcgggcagctgcagcagaacgaaccg
agccgtttcctggaagaaattcctgaaaaataccttgaccgcagctatgccggcggcggc
ctccgcaacagcggcgccatgggcggcggcgcttcctggggcaatatgttcgacaagcgc
aaggcgcccggcgcagctgccggtccttcccgccctgcgcagcaggagccccggccccgg
gtgatttcttctcccacagcggccaaccacacgccttccgccaacttcacggccgatgat
ccggcaaccatggaagtgggcatggatgtggagcaccagaaattcggcttcggcaagatc
attggcctggaaggcgcgcccaacaaccgtattgccacggtgatgttccctaaggcgggc
ggcgaaaagaaaatcatgctcaattacgccaaattgatgatcgtccggcagtaa
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