Chitinophaga pollutisoli: WJU16_12905
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Entry
WJU16_12905 CDS
T10245
Symbol
nusA
Name
(GenBank) transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
cpol Chitinophaga pollutisoli
Brite
Transcription machinery [BR:
cpol03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
WJU16_12905 (nusA)
Ribosome biogenesis [BR:
cpol03009
]
Prokaryotic type
rRNA transcription factors
WJU16_12905 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
KH_NusA_C
S1
KH_2
KH_1
RNA_pol_A_CTD
DEK_C
Motif
Other DBs
NCBI-ProteinID:
WZN38901
LinkDB
All DBs
Position
complement(3123755..3125002)
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AA seq
415 aa
AA seq
DB search
MASINLIESFTEFKEAENIDRPTLMKVLEDVFKTLLRKKYGSDENFDVIVNTEKGDLEIL
RRRTIVEDGTVEDENAQVAYSEAILIEPDYQVGEDLYEEVEILDFGRRAILAAKQTLTAR
IGDLKKNILVKKYGDRVGEIVTGEVYQVWKKEVLLLDDEGNELILPKSEQIPTDYFKKGE
NVRAVVKKVELKNNSPLIILSRTHPSFLAKLLEIEVPEIFDGLIVIKKIVREPGERAKVA
VESYDDRIDPVGACVGMKGSRIHGIVRELRNENIDIINYTANIQLLIQRALTPARISRME
VDNDNKYASVYLKPDQVSLAIGKKGVNIKLACELTGYEIDVFRDEEQEQTEFDIDLEEFA
DEIEAWVIDELKRIGCDTARSVLDLTSEELVRRSDLEEETVTEVRRILQEEFEKE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggctagtattaacctgattgagtcattcaccgagtttaaggaggccgagaacatcgac
cggcccacgctgatgaaggtgttggaggacgtgtttaagaccctgttgcgtaagaaatat
ggctcagatgagaactttgacgtgattgtaaatactgagaaaggtgacctggagattctt
cgccgccgcaccatcgtggaagatggaacggtagaggacgagaatgcgcaggtggcttat
tccgaagccattctgatcgagcccgactaccaggtgggggaagatttgtatgaagaagtg
gaaatcctggatttcgggcgccgcgccatcctggcagcgaagcaaacgctgaccgcccgc
atcggcgacctgaaaaagaacatcctggtgaagaaatacggcgaccgcgtaggcgagatc
gtaaccggggaagtttaccaggtgtggaaaaaagaagttttattattggatgatgaaggg
aatgaactaatattgcctaaatccgagcagataccgacggattatttcaagaaaggtgag
aacgtgagagcagtcgtgaagaaagtggagctgaaaaataactccccgctgatcatcctt
tccagaacacatccctccttcctggccaaactcctcgaaatcgaggtgccggaaatcttc
gacggcctaatcgtgatcaaaaagatcgtgcgcgagcccggcgaaagagccaaagttgcc
gtggaatcctatgacgaccgtatcgaccccgtaggcgcctgcgtgggtatgaaaggaagc
cggattcacggcatcgtacgtgaactccgcaacgagaacattgacatcatcaactatacc
gcaaacattcagctcctgatccagcgcgcactcacgcccgcccgcatcagccggatggaa
gtggataatgataacaagtacgcctccgtttacctcaaacccgaccaggtatcactggcc
atcggtaaaaaaggcgtgaacattaaactggcctgcgaactgaccggctacgaaatcgat
gtgttccgcgatgaagaacaggaacaaaccgaattcgacatcgacctggaagaattcgca
gacgaaatcgaagcctgggtaatcgacgaactgaaaagaatcggttgcgatacagcccgc
tccgtcctggatctgacttcggaagaactggtacgccgctccgacctcgaagaggagacc
gtaacagaagtgagaaggattctccaggaagaatttgaaaaagaataa
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