Chitinophaga pollutisoli: WJU16_14460
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Entry
WJU16_14460 CDS
T10245
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
cpol Chitinophaga pollutisoli
Brite
KEGG Orthology (KO) [BR:
cpol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpol03032
]
WJU16_14460
03036 Chromosome and associated proteins [BR:
cpol03036
]
WJU16_14460
03400 DNA repair and recombination proteins [BR:
cpol03400
]
WJU16_14460
DNA replication proteins [BR:
cpol03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
WJU16_14460
Chromosome and associated proteins [BR:
cpol03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
WJU16_14460
DNA repair and recombination proteins [BR:
cpol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
WJU16_14460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_1
Sulfolobus_pRN
Motif
Other DBs
NCBI-ProteinID:
WZN39204
LinkDB
All DBs
Position
3462242..3462529
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AA seq
95 aa
AA seq
DB search
MRKADLINNIAEKTGIPKVDVLVTLEAMFKEVKEALANGEHIYIRGFGSFITKKRAAKIG
RNIKKNVAVEIPEHYIPAFKPSKEFVAEVKKLKSS
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaagctgatttgattaacaacattgctgaaaaaaccggcatcccgaaagtagat
gtgttagtaacactcgaagccatgttcaaggaagtgaaggaggcgttagctaatggcgag
catatctacatccgcggatttggcagtttcatcactaagaaaagggctgccaagatcggg
cgcaacatcaagaagaatgtggccgtggagatccccgagcattacattccggcgtttaaa
ccgtcgaaagaatttgttgcagaggtaaagaagcttaaaagttcataa
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