Chitinophaga pollutisoli: WJU16_14470
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Entry
WJU16_14470 CDS
T10245
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
cpol Chitinophaga pollutisoli
Brite
KEGG Orthology (KO) [BR:
cpol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpol03019
]
WJU16_14470
03009 Ribosome biogenesis [BR:
cpol03009
]
WJU16_14470
Messenger RNA biogenesis [BR:
cpol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
WJU16_14470
Ribosome biogenesis [BR:
cpol03009
]
Prokaryotic type
rRNA processing factors
WJU16_14470
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
PIG-L
AHD
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
WZN39206
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Position
3463854..3465401
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AA seq
515 aa
AA seq
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MNKELIINAAPSGVEIALLEDKKLVELHHESGNPNFAVGDLYLGKVKKLIPGLNAAFVDV
GFEKDAFLHYTDLSPYIRSILKFTNQAISDKSGAFDFGKFKNEPEIIKTGKITEVLGGKP
NILVQILKEPISSKGPRLSCEISLPGRFIVITPFNNIVAVSKKIHSSEERKRLQKIVEAI
KPPNFGVIVRTAAEGKKTAELHEDLTTLVNTWHTIQENLRSGQAPQKILSEQTKTTSILR
DLLNESFNRIVINDKNIYTDTKTYIQKIAPEKQDIVTYYHNGAPIFDHFGVTRQVKASFG
KTVNLDSGVYLIIEATEALHVIDVNSGYKSSSNNQEQNALASNLEAAAEIARQLRLRDLG
GIIIIDFIDMKLPENKKNVYEAMEKFMAPDRAKHTILPISKFGLMQITRQRVKPEITISV
AEDCPTCKGTGKIGASMLIVEDIEKNLQYLLNHQHKGLTIRVHPILYAYLTKGWLRSRQW
KWYFAYKKWIKLRADSNYHLTEYHFFDDNDEEIKF
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
ttgaataaggaattgattataaatgcagcaccatccggtgttgaaattgcattgctggaa
gataagaagttggtagagctgcatcacgaaagcggcaatcctaattttgcggtgggggac
ctttatttaggcaaagtaaaaaaactgatcccgggccttaatgcggcattcgtggacgta
ggtttcgaaaaagacgccttcctccattataccgacctcagcccttacatccgttccata
ctaaaattcaccaaccaggccatctccgataaatccggtgccttcgatttcggcaaattc
aaaaatgaacccgaaatcatcaaaaccggaaaaatcaccgaagttctcggtggaaagccc
aacatcctcgtacaaattctcaaagagcccatctcctccaaaggcccgcgcctcagctgc
gaaatctcgctccccggccggttcatcgtgatcaccccgttcaacaacatcgtggccgtc
tccaaaaagatccactcctccgaagaacggaaaaggctccagaagatcgttgaagccatc
aaaccacctaacttcggcgtcatcgtccgcaccgcggctgaaggcaaaaagaccgccgaa
ctgcatgaagacctgaccaccctggtgaatacctggcacaccatccaggaaaacctgcgc
agcggacaagccccgcagaagatcctgagcgaacaaaccaaaaccaccagcatcctccgc
gacttgttgaacgaatccttcaaccggatcgtcatcaacgacaaaaacatttacaccgac
acaaaaacgtatatccagaagatcgcgcccgaaaagcaggacatcgtgacctactaccac
aacggcgcccccatcttcgaccacttcggggttacccggcaggtgaaagcctctttcggc
aaaaccgtcaacctcgattccggcgtttatctcatcatcgaagccacggaagccctccac
gtcatcgacgtaaactcgggctacaaaagctccagcaacaaccaggaacaaaacgccctc
gcttccaacctggaagccgcggcggaaatcgcccggcagctgcgcctccgcgacctcggc
ggcatcatcatcatcgatttcatcgatatgaaactgcccgaaaacaagaaaaacgtatac
gaagccatggagaaattcatggcgcccgacagagccaagcacaccatcctgcccatctcc
aagttcggactcatgcagatcacccgccagcgcgtgaaaccggaaatcaccatttccgtg
gcggaagactgccccacctgcaaaggcaccggcaaaatcggcgcctctatgctcatcgtg
gaagacatcgaaaagaacctccagtatctcctcaaccatcagcacaagggcctcaccatc
cgcgtgcaccccatcctctacgcatacctcaccaaaggatggctccgcagccgccagtgg
aaatggtatttcgcgtacaagaaatggatcaaactccgcgcagattccaactaccatctc
acggagtaccacttcttcgatgacaacgacgaggaaatcaaattctga
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