Chitinophaga pollutisoli: WJU16_17915
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Entry
WJU16_17915 CDS
T10245
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
cpol Chitinophaga pollutisoli
Pathway
cpol02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cpol00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
WJU16_17915
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpol02000
]
WJU16_17915
Transporters [BR:
cpol02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
WJU16_17915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
TniB
AAA_22
AAA_21
ABC_ATPase
AAA_16
ATP-synt_ab
AAA
AAA_5
RsgA_GTPase
TsaE
nSTAND3
EspG
NB-ARC
NACHT
MobB
AAA_29
AAA_18
PRK
NPHP3_N
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
WZN43880
LinkDB
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Position
4266566..4267783
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AA seq
405 aa
AA seq
DB search
MIAMAISCGPRLLIADEPTTALDVTVQKTILELLQELQREMGMSVVFITHDLGVIAEIAD
RVVVMYKGEIVEEGAVKPIFEQPVHAYTKGLLACRPPLDLRLRRLPVVNDFTGSREPVEV
NAFVRSLEMPEPEMRARQEMLLERPPLLEVESLSTWFPTGRTLFGKVKHWTKAVDDISFT
VREGETLGLVGESGCGKTTLSRTLLRLVEPTHGAIRYRGRDLLSLSAAELRDMRKNIQLI
FQDPYSSLNPRMTVGQAILEPLQVHGLYGNDRERRDKVLELLEKVQLLPEHYHRYPHEFS
GGQRQRIVIARALALHPEFIICDESVSALDVSVQAQVLNLLRALQHEFNFTYIFISHNLS
VVHFMSDRMMVMQKGKIAEMGPAEEVYHRPASAYTKELIAAIPGR
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcgatggcgatttcttgcggcccgcggctcctgatcgccgacgagcccaccacg
gcgctcgatgtaaccgtacagaaaacgattctcgaactgctgcaggaattgcagcgcgaa
atggggatgagcgttgtcttcatcacccacgacctcggtgtgatcgcggagatcgccgac
cgggtagtggtgatgtacaaaggtgagattgtggaagaaggggcggtgaaacccattttc
gaacagccagtccatgcttatacgaaaggcctgctggcctgtaggcctccgctggatctc
cgcctgcgccgcctgcctgtggtgaatgatttcacaggcagccgtgagcccgtggaagta
aacgctttcgtgcgttccctggagatgccggagccggagatgcgggcgcggcaggaaatg
ttgttggaaaggccgccgttactggaagtggagagcctcagcacctggttccctacgggt
agaacgcttttcgggaaagtgaaacattggacgaaagcggtggatgatatcagttttaca
gtccgggaaggggaaacattgggactggtgggcgaatccggttgtgggaaaacgacattg
agccggacgctcctgcggttggtggagcccacgcacggcgctatacgttaccgcggcagg
gatctgctgtcgctttccgcggcggagctgcgcgatatgcggaaaaacatccagctgatc
ttccaggatccttattcctcgctgaatccccggatgaccgtgggccaggcgatcctcgaa
ccgttgcaggtgcacggcttgtatggaaacgaccgggaaaggagggacaaggtgctggag
ctgctggaaaaggtacagttgttgccggaacattaccaccgttacccccatgagttctcc
ggcgggcagcggcagcggatcgtaatcgcaagggccctggcattgcatccggaatttatt
atttgcgacgagtcggtgtcggcgctggacgtgagcgttcaggcgcaggtactcaacctg
ctgcgggcgcttcaacacgagtttaatttcacgtatatctttatatctcataatctgtct
gttgtacattttatgagcgaccggatgatggtaatgcaaaaagggaagatcgcggaaatg
ggcccggcggaggaagtgtatcaccgtccggcttcggcgtacacaaaggaattgatcgcg
gcgattccgggccggtga
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