Chitinophaga pollutisoli: WJU16_18815
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Entry
WJU16_18815 CDS
T10245
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cpol Chitinophaga pollutisoli
Brite
KEGG Orthology (KO) [BR:
cpol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpol03016
]
WJU16_18815 (truB)
Enzymes [BR:
cpol01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
WJU16_18815 (truB)
Transfer RNA biogenesis [BR:
cpol03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
WJU16_18815 (truB)
Prokaryotic type
WJU16_18815 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
WZN40033
UniProt:
A0ABZ2YJX2
LinkDB
All DBs
Position
complement(4443737..4444429)
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AA seq
230 aa
AA seq
DB search
MSETPNFQEGAVLLINKPLTWTSFDVVRKIRNTTKAKIGHAGTLDPLATGLLICCTGKMT
KKINEYQAKEKEYTGTFTLGAVTPTFDLESEPQDHQPVPELDQASLQQIADTFTGPLQQL
PPIHSAIKQNGKPIYHLARKGVEVKVEPRSIVIHAFEITKVELPIVHFRVECSTGTYIRS
LANDFGAAVGCGGHLSSLCRTRIGDFRLEDAMDVVQFIEEYKKMQETQNG
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaacaccgaattttcaggaaggcgccgtgctgttgatcaataaaccattgacc
tggacctccttcgacgttgtccgcaagatccgcaataccaccaaagccaagatcggccat
gccggtacgctggaccccttagccacagggctcctcatttgctgcaccggcaaaatgacc
aagaaaatcaacgaataccaggcgaaagaaaaagaatataccggcaccttcaccctcggc
gccgtaacccccaccttcgacctcgaatcggaaccccaggaccatcagcccgttcctgaa
ctggaccaggcctccctgcaacaaatagcagatactttcaccggccccctgcagcaattg
ccgcccatccactccgctatcaaacagaacggcaaacccatctaccacctcgcccgcaaa
ggcgtggaagtgaaagtggagccccgttccatcgtgatccatgcttttgagatcacgaaa
gtggaactgcccatcgtacatttccgcgtggaatgcagcaccggcacctacatccgttcg
ctcgccaacgattttggcgctgccgttggatgcggcggccatctcagcagcctctgccgt
acccgcatcggcgacttccggctggaagacgcaatggatgtggtgcaattcatcgaggaa
tacaaaaaaatgcaggaaactcagaacggatag
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