Chitinophaga pollutisoli: WJU16_23975
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Entry
WJU16_23975 CDS
T10245
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
cpol Chitinophaga pollutisoli
Brite
KEGG Orthology (KO) [BR:
cpol00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpol02000
]
WJU16_23975
Transporters [BR:
cpol02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
WJU16_23975
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
Motif
Other DBs
NCBI-ProteinID:
WZN41024
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Position
5630713..5632197
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AA seq
494 aa
AA seq
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MRKIWIGGLVVMMAAGWTSCKNMLDIESTRAVTEENMWATKNDAWAGSFACYGLLRAAMC
NENAYWSHGELRAGQFTITKRGDLQAVRDNRLTSNYVTMDTWRDWRKFYATIAQCNLAIA
KLPGIPAQDERYSKTEMELDLAQVRYIRAFTYFYMVRVWGDVPLITEVGQGDFATLPRTP
QNEVLEFAFNEATNAIAKLPWQFDGTHPEQTGNYRGQGISHWRSILATKGAGFTLQAHIR
AWQKDYEGALAAIQVIRDNGSKTGYGTVSVTDLVSNAGTFRGRRNENIFQLDMNFDHAEI
STTGQIENWTLRAPDVAKKEAEIYVTKDSILNIFPLASDLRLTTFFTDMGSMQPMFYKIK
MLNDAVKNPTLRFFNSAIVVFRYEELLLLQAECQLRTGNFSGALTLLNDRRGNRNLTPVL
NTVSEEQLLDEIFQERRRELIGEGWLWYDLVTFGKVPEFTGLSQADVDNGAIYWPVSRAA
LSLNPKLIQTNYWK
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaaaatatggataggcggcctcgttgtaatgatggccgccggctggacgtcctgc
aaaaacatgctggacatcgaaagcacccgtgctgtgacggaggagaatatgtgggcgacg
aagaacgacgcgtgggcaggcagcttcgcctgctacgggctgctgcgcgccgccatgtgc
aacgaaaacgcgtactggtcgcacggtgagctgcgagccggacaattcaccattaccaag
cgtggcgacctccaggccgtgcgcgacaacaggctcacctcgaactatgtgacgatggat
acctggcgcgactggcgcaagttctacgccaccattgcccagtgcaacctggccatcgcc
aagctgccgggcatcccggcgcaggacgagcgttattccaaaacggaaatggagctggac
ctcgcgcaggtgcgttacatccgcgcgttcacttatttctacatggtgcgcgtttggggc
gatgtgcctctgatcaccgaagtgggccagggcgattttgccacccttccacgtacgccc
cagaacgaagtgctggaattcgctttcaacgaagccacgaacgccatcgcgaaactgccc
tggcagttcgacggtacccatccggagcagaccggcaactaccgcggtcagggcatcagc
cactggcgcagcatcctggccaccaaaggcgcagggttcacgctgcaggcgcacatccgg
gcatggcagaaggattatgaaggcgcgctggccgccatccaggtgatccgcgacaacggc
agcaaaaccggttacggcaccgtaagcgttaccgacctggtaagcaacgccggtacattc
cgcggccgcaggaacgaaaacattttccagctggatatgaacttcgaccacgcggagatt
tcgacgacggggcagattgaaaactggacgctccgcgcgccggacgtagccaagaaggaa
gcggagatctacgtgacgaaagacagtatcctcaatatcttcccgctggcttcagacctt
cgcctgacgaccttcttcaccgatatgggttccatgcagcccatgttctacaagatcaag
atgctgaacgacgcggtgaagaaccccacgctgcggttcttcaattccgccatcgtggtt
ttccgttacgaagaactgttgctgctccaggccgaatgccagctgcggacgggtaacttc
tccggcgcgctcaccctgctgaacgaccgccgcggcaaccgcaacctcacgccggtgctc
aatactgtttcggaagagcagctgctggatgaaatcttccaggaacgccgccgcgagctc
atcggcgaaggatggctgtggtacgacctggtgaccttcggcaaagtgcctgaattcacc
ggcctctcgcaggcggatgtggacaacggcgccatctactggcctgtttcccgcgcagcg
ctcagccttaatcccaaactcatccaaaccaattactggaagtaa
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