Chitinophaga pollutisoli: WJU16_24875
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Entry
WJU16_24875 CDS
T10245
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
cpol Chitinophaga pollutisoli
Brite
KEGG Orthology (KO) [BR:
cpol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpol03036
]
WJU16_24875 (xerD)
Chromosome and associated proteins [BR:
cpol03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
WJU16_24875 (xerD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Phage_int_SAM_5
Motif
Other DBs
NCBI-ProteinID:
WZN41202
LinkDB
All DBs
Position
5842601..5843518
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AA seq
305 aa
AA seq
DB search
MWEASVNGFRVHLRMERSLSQHTIEAYERDVRVLARYLVQAGKPVGPESVTLEELEACVR
WVAELGMTASSQARMISGIRTFFRYLQREDLISHDPAQLLEAPKTPRKLPDFLSVEEIDA
IIEQVPNYGTEKDPAIIQRNTALLETMYCCGLRVSEAVGLRLSQLHFHDGYIRVLGKGDK
ERLVPIGRSAIGHINRYREEFRQFAPIARGHEDILFLNRRGKGLTRVMVFLIIKELARLA
NIKKNISPHTFRHSFATHLVEGGADLVAVQEMLGHESITTTEIYTHLNREYLRDMLVQFH
PGFHR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtgggaagcatcggtcaacgggttcagggttcatctgcggatggagcgttctttatcg
cagcatacaatagaggcgtatgagcgggatgtgcgggtgctggcacggtacctcgtgcag
gccggcaaacccgtcgggccggaatccgtgaccctggaagagctggaggcctgcgtcagg
tgggtagcggaactggggatgacggccagcagccaggcgcggatgatttcggggatccgg
acgtttttccggtacctgcagcgggaagacctcatctcccacgaccccgcccagttgctg
gaggcgcccaaaacacccaggaagctgcccgacttcctcagtgtggaagaaatcgacgcg
attattgaacaagtcccgaattacggaacggaaaaagaccccgccatcatccagcgcaac
accgccctgctggaaaccatgtattgctgcgggctccgggtgagcgaagccgtggggctg
cggctttcgcagctgcattttcacgacgggtatatccgggtgttagggaaaggcgacaag
gaaaggctcgtaccaatcggccgttcggcaatcgggcatattaacagatacagggaagaa
ttccggcagtttgcgccgatcgcccgggggcacgaagatatattattcctgaaccgccgg
ggcaaagggctcacccgggtgatggtattccttattataaaggagctggcgcggctggcc
aatatcaaaaagaacatctccccccacaccttccgccactccttcgccacgcacctcgtg
gaaggcggggccgacctcgtggcggtacaggaaatgctggggcacgaaagcatcaccacc
acggaaatctacacgcacctcaaccgcgaatacctgcgcgatatgctggtgcagtttcat
ccggggtttcaccggtaa
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