Chitinophaga pollutisoli: WJU16_25390
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Entry
WJU16_25390 CDS
T10245
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
cpol Chitinophaga pollutisoli
Pathway
cpol03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cpol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
WJU16_25390 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpol03400
]
WJU16_25390 (xth)
Enzymes [BR:
cpol01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
WJU16_25390 (xth)
DNA repair and recombination proteins [BR:
cpol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
WJU16_25390 (xth)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Menorin_N
Motif
Other DBs
NCBI-ProteinID:
WZN41302
UniProt:
A0ABZ2YPP3
LinkDB
All DBs
Position
complement(5960358..5961131)
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AA seq
257 aa
AA seq
DB search
MKIATYNVNGVNGRLPVLLRWLEESAPDLVCLQELKAPEEKFPLQAIRDAGYHAIWHGQK
SWNGVAILSRYGLPAEVTRVLPGDPEDLHSRYIEAEVEGITLGCLYLPNGNPAPGPKFDY
KLRWFERFTMHAAELFASGKPVVLAGDYNVIPTEHDVYKPERWVDDALFLPETRAAFEKL
LSQGWTDALRKLYPNETIYTFWDYFRNAFGRNAGLRIDHFLLSPAVDKRLKEAGVDKFVR
GWEKSSDHAPVWIELKP
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagccacctataacgtgaacggtgtaaacggccgtttgcccgtactgctgcgc
tggctggaagaaagcgcccccgacctggtgtgcctccaggaactgaaagcccctgaggaa
aagttccccctgcaggccatccgcgatgcaggctatcacgccatctggcacggacaaaaa
agctggaacggcgtggctatcctttcgcggtacggattaccggccgaagtaacgcgcgta
ctcccgggagatccggaagacctccacagccgctatatcgaagccgaagtggaaggcatc
acgctcggctgcttgtacctgccaaacggcaatcccgccccggggcccaaattcgactat
aagctgcgctggttcgaacgcttcacaatgcatgccgcggaactgttcgcatccggcaaa
cccgttgtgctggcaggcgattataacgtgatccccacggaacacgacgtgtataaaccc
gagagatgggtcgacgatgcactctttctccccgaaacgcgcgccgcattcgaaaagttg
ttgtcgcagggctggaccgacgctctgcgcaaattataccccaacgaaaccatttatacc
ttctgggattatttccgcaatgctttcggcaggaacgccggcctgcggatcgaccacttc
ctgctaagcccggccgtagacaagcggctcaaagaggccggggtcgacaaattcgtgcgc
ggatgggaaaaatccagcgaccatgcacccgtttggatcgagctgaaaccgtga
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