Curtobacterium pomorum: ACGH48_10275
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Entry
ACGH48_10275 CDS
T11705
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
cpom Curtobacterium pomorum
Brite
KEGG Orthology (KO) [BR:
cpom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpom03019
]
ACGH48_10275
Enzymes [BR:
cpom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ACGH48_10275
Messenger RNA biogenesis [BR:
cpom03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ACGH48_10275
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
nSTAND_NTPase5
AAA_22
IstB_IS21
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
XJU92735
LinkDB
All DBs
Position
complement(2135820..2138261)
Genome browser
AA seq
813 aa
AA seq
DB search
MTADLSAAERFAAAKVRNRSRNLELFRSDLRFDLDPFQFAACDALDQGRSVLVAAPTGAG
KTIVAEFAIWLAMRQPTAKVFYTTPMKALSNQKYAELVEVYGESEVGLLTGDTNVNPRAR
VVVMTTEVLRNMIYADSDLLDDLAWVVLDEVHYLADRFRGAVWEEVILHLPTEVRLVSLS
ATVSNAEEFGDWLQTVRGDTDVIVSEDRPVPLEQHVLVGSKMVDLFDSSGAAATNRVNPE
LLRMVGGASRSERHGGGHRGGRGRGGYHDRRGPRTEKLHRERIAHMLDERMLLPAIFFVF
SRAGCDQGVRNVLRSGLSLTTVPERNEIRETAEYHCRTLPDEDLAVLGYWEFLEGLERGV
AAHHAGMLPAFKEVVENLFQRKLLKVVFATETLALGVNMPARTVVLEKLEKFNGEARVPI
TPGEYTQLTGRAGRRGIDVEGHSVIQWTDGLDPQAVASLASRRTYPLNSSFKPTYNMAVN
LIDQFGRQRTREVLETSFAQFQADRSVVDLARKVRSQQESLEGYREAMQCHLGDFTEYAA
LRRELSDLERTNVPGGREASHGARQERQAAITAVRRQMQRHPCHACPDREAHARWAERWW
KLKRVNDKLVQQIRSRTGAVATTFDRVTDVLLQLGYLVDAGNGEATVAAGGRRLQRIYGD
RDLLVAECLEAGVWKDLTPAQLAAMAATIIYQPRRDDAPGTEHALPRGAFRPALDETLTI
WSRLDDIERDARLAGSLPPTPAMAVGMFRWASGSALDDVLRTLDLPAGDFVRWSKQVIDL
LDQIRNAGDDDLAQTARRATDAVRRGIVAYAAV
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcggacctcagcgcggccgagcgcttcgccgccgccaaggtccggaaccgctcc
cgcaacctggagctgttccgttccgacctgcgcttcgacctcgacccgttccagttcgcc
gcctgcgacgcgctcgaccagggccgcagcgtcctcgtcgccgcgccgaccggtgccggc
aagacgatcgtcgccgagttcgcgatctggctggcgatgcggcagccgacggcgaaggtg
ttctacacgacgccgatgaaggcgctgagcaaccagaagtacgccgagctggtcgaggtc
tacggcgagtccgaggtgggcctgctcaccggtgacacgaacgtgaacccgcgggcgcgg
gtcgtcgtgatgacgaccgaggtcctgcggaacatgatctacgcggactccgacctgctc
gacgacctggcctgggtggtcctcgacgaggtccactacctggccgaccgcttccgcggg
gccgtgtgggaagaggtgatcctgcacctcccgaccgaggtccggctcgtctcgctgagc
gccacggtctccaacgccgaggagttcggcgactggctgcagaccgtccgcggcgacacg
gacgtcatcgtgtccgaggaccgcccggtcccgctcgagcagcacgtgctggtcgggtcg
aagatggtcgacctgttcgactccagcggtgcggcggcgacgaaccgcgtcaacccggag
ctgctccgcatggtcggcggtgcgtcgcgtagcgaacggcacggcggcggacaccgcggt
ggacgtggacgcggcgggtaccacgaccgccgtgggccgcgcaccgagaagctgcaccgc
gagcgcatcgcgcacatgctcgacgagcggatgctgctgcccgcgatcttcttcgtgttc
agccgtgccgggtgcgaccagggcgtccggaacgtcctgcggtccgggctgtcgctcacg
acggtgccggagcgcaacgagatccgtgagaccgcggagtaccactgccgcaccctgccg
gacgaggacctcgccgtcctcggctactgggagttcctcgaggggctcgagcgcggggtc
gccgcgcaccacgcgggcatgctgcccgcgttcaaggaagtggtggagaacctcttccag
cgcaagctgctcaaggtcgtgttcgccaccgagaccctggcgctcggcgtgaacatgccg
gcccgcacggtggtgctcgagaagctcgagaagttcaacggcgaggcccgtgtcccgatc
accccgggggagtacacccagctcaccggtcgagccgggcgccgtggcatcgacgtcgag
ggacactcggtcatccagtggaccgacgggctcgacccgcaggccgtcgcctcactcgcc
agccgtcgcacgtacccgctgaactcgtcgttcaagccgacgtacaacatggccgtcaac
ctgatcgaccagttcggccggcagcgcacgcgcgaggtcctcgagacgtcgttcgcgcag
ttccaggccgaccggtccgtggtcgacctggcccgcaaggtccgctcgcagcaggaatcg
ctcgaggggtaccgcgaggcgatgcagtgccacctcggcgacttcaccgagtacgcggcg
ctccgccgggagctctccgacctggagcgcacgaacgtgcccggcggacgcgaggcctcg
cacggcgcacggcaggaacggcaggccgcgatcacggcggtccgtcgccagatgcagcgt
cacccctgccacgcgtgccccgaccgcgaggcgcacgcccgctgggcggagcgctggtgg
aagctcaagcgcgtcaacgacaagctggtccagcagatccggtcccgcaccggtgccgtg
gcgaccacgttcgaccgggtcaccgacgtgctcctgcagctcgggtacctggtcgatgcc
ggcaacggcgaggccaccgtggccgccgggggccgtcgcctgcagcgcatctacggcgac
cgcgatctgctcgtcgccgagtgtctcgaggcgggggtctggaaggacctcaccccggcg
cagctcgccgcgatggccgccacgatcatctaccagccccgtcgcgacgacgcccccggc
accgagcacgcactgccccgcggtgcgttccgcccggccctcgacgagaccctgacgatc
tggtcgcgcctcgacgacatcgagcgcgacgcccgcctggccggttcgctgccgcccacc
ccggcgatggcggtcggcatgttccgctgggcgtccggctcggcgctggacgacgtcctg
cgcaccctcgacctgcccgccggtgacttcgtccgctggtcgaagcaggtcatcgacctg
ctcgaccagatccggaacgccggcgacgacgacctcgcccagaccgcccgacgtgcgacg
gacgcggtccgccgcggcatcgtcgcctacgcagcggtctga
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