Crocodylus porosus (Australian saltwater crocodile): 109305483
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Entry
109305483 CDS
T07440
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo04510
Focal adhesion
cpoo04512
ECM-receptor interaction
cpoo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109305483 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109305483 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
109305483 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpoo04147
]
109305483 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
cpoo00536
]
109305483 (COL4A2)
Exosome [BR:
cpoo04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
109305483 (COL4A2)
Glycosaminoglycan binding proteins [BR:
cpoo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109305483 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
109305483
NCBI-ProteinID:
XP_019384030
LinkDB
All DBs
Position
Unknown
AA seq
1730 aa
AA seq
DB search
MTMQVLLLLMLTTLLTGRVQAGGKTYTGPCAGRDCSGGCQCFPEKGSRGQPGPLGPQGFP
GPPGLIGIPGLEGPKGHKGERGQPGITGPKGDQGLRGVTGFPGADGVPGHPGQPGSRGKP
GHDGCNGTTGDPGEQGIQGPPGQFGFTGAQGPKGQKGEPYALPPEVAEQYRGEKGEPGIK
GFPGPQGEPGPVGFIGPKGRPGRPGRPGPPGPPGEKGNRGLGFYGEKGEKGEIGPKGPAG
RPSTREFTTSTDFSMDDYKVFLWQSFPKHLLINKLVSDTVVPLGEKGMQGEKGDPGRPGF
PAPQAEKGEEGIMGSPGQRGLPGISGIQGPVGEAGSRGFYGSPGYDGPKGMKGEQGERGI
QGLPTYVPYPIPRKGVRGDPGVPGFQGPRGELGEKGDPGIPGWPETLDELDDLDKRGLPG
EMGPKGYKGEPGFSAFQPGIPGFPGQPGPKGFPGPPGPKGSSFISFGLKGRTGDPGEAGS
QGFPGPRGDKGFKGETGDCKCTRSDEARKGSAGLPGPPGFEGPPGDPGRKGEPGDQGQHG
IPGFPGTKGFPGETGYPGPRGQKGDSIYITTKGFKGDPGDPGLAGVQGDDGLPGKDGTHG
LPGPAGLPGDGIRGLPGDPGFPGPTGVKGFPGDAGLPGVGLPGSKGFHGLPGDHGTYGKS
GPPGPPGPPGDPAQLGCDQVPEDLSRGDGREPIWPGAGCVRAPPGQPGKPGFPGSTGSKG
AKGIPGDPGLDGFQGLKGFPGDPGQEGLPGPPGFPGPRGERGPSGLTGQQGEKGISGKPG
VQGPEGPKGVAGEVLGASAGSIGDVGLPGLPGLKGPPGNQGVPGLQGAAGIPGSPGSKGE
PGLQGPRGLIGLPGEPGSHGFPGIPGQQGPAGRGGITGHIGSPGARGDHGEQGFPGPVGM
KGLSGDKGEPGIPGIQGIPGKTGLPGIDGMHGLQGYKGAKGSPGIEGFKGMTGNRGFQGP
KGFKGEIGFFGIYGPKGEQGITGSKGDRGEQGEPGQPPKIEAKMLKEVKGEKGDSGQTGF
SGDPGFKGLKGMPGIPGKPGLPGFPGQPSHVSGAKGAIGSKGVPGSPGYPGQAGSPGIRG
FPGSTGIRGEKGTPGFTGLFGESGLPGESGDPGDIINLPGIPGLKGEVGTPGSSGVRGSP
GEKGQRGDPGFSGIEGLKGLQGLPGIKGQSGFPGLVGPPGQQGDPGAPGLPGEKGTQGRP
GLAGPTGLPGLRGIHGQSGLPGTKGLPGSPGLDDYGPSGFPGGPGDKGQIGDPSTLEGAR
GGPGQKGERGNQGERGPAGSPGHDGIPGPPGVSNISGIRGDVGSPGLDGVPGYKGEQGRH
GIPSPPGSKGETGQIGVIGEDGPKGTRGDPGLTGKPGILGSFGEKGQKGEQGVMGTVGTV
GIPGDRGPTGPKGNRGVTGLQGPPGSPGLSPIPSKRLAEVGAPGPHGRRGPQGIPGEIGP
QGPLGDLGFRGAPGKQGLQGKSGIPALPGFRGDQGPQGHRGPSGSEGIPGRPGSPGLPGM
PGRSVSIGYLLVKHSQSDQEPMCPIGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLTRF
STMPFLYCNPGDVCYYANRNDKSYWLSTTAPLPMMPVAEEEIRPYISRCSVCEAPAVAIA
VHSQDVSIPHCPEGWRSLWIGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGA
RGTCHYYANKYSFWLTTIEEQFQSTPSADTLKAGLIRTHISRCQVCMKNL
NT seq
5193 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgcaggttctgctgctgttgatgctgactacactgttaactggaagagtccaa
gctggtggaaagacttacacaggaccatgtgcaggaagagactgtagtggaggatgtcaa
tgtttccctgaaaaaggaagccgtggccaaccaggaccacttggaccacagggattccct
ggaccaccaggattaataggtataccaggtttagaaggtcccaaaggtcataaaggtgaa
agagggcaaccaggaataactggaccaaaaggagaccagggcttaagaggagttactggc
tttcctggagcagacggtgttcctggtcatccaggccagccagggtcaagaggaaaacca
ggtcatgatggctgcaatggtacaacaggtgaccctggtgaacagggaatccagggcccc
ccgggtcaatttggtttcactggagcccaaggaccaaaagggcagaagggagaaccatat
gcattgcctcctgaagtagcagaacaatacagaggtgagaagggtgaaccaggaattaag
ggctttccagggcctcagggtgagcctggtcctgtgggctttattggtccaaaagggagg
ccaggaagaccaggacgaccggggccaccaggacctccaggagaaaaaggcaacagaggc
cttggcttttatggagaaaaaggtgaaaagggcgagataggtcccaaaggtcctgctggg
cgtccatctacaagggagtttacaacttccacagatttctcaatggatgactacaaggta
tttctttggcagtcattccctaagcatctcctcataaacaagcttgtttcagacacggta
gtacccctgggagaaaaaggaatgcaaggagaaaaaggagatcctggaagaccaggcttc
cctgcacctcaagctgaaaagggagaagaagggataatgggttctccaggacaaagggga
ttgccaggcatcagtggcattcaaggacctgttggagaagcaggttctcgaggattttat
ggctccccaggctatgatggtcctaaaggaatgaagggagagcagggcgaaagaggtatc
caaggattgcctacttacgttccttatcccattccaagaaaaggtgtcagaggtgaccca
ggagtaccaggtttccaggggcctagaggagagttgggggaaaaaggagatcctggaatt
cctggttggcctgaaacattggatgagcttgatgacttggacaaaagaggtttacctgga
gaaatgggacccaaaggttataagggagaaccaggtttttcagcttttcagccagggata
cctggctttcctggtcagcctggaccaaaaggattccctggccccccaggcccaaaaggc
agttcattcatctcatttggactgaagggacgcaccggggatccaggtgaagcaggcagc
caaggtttccctggaccacgaggagataaaggatttaaaggtgaaacaggggattgtaag
tgtaccagaagtgatgaagccagaaagggttctgctggtctacccggtccaccaggtttt
gaaggcccacctggagatcctggaaggaaaggagagcctggtgatcaaggtcaacatggc
attccaggcttccctgggacaaaaggcttccctggtgaaactggataccctggaccaaga
gggcagaaaggagattctatttatataacgactaaaggttttaaaggagatccaggagat
cctgggctggctggtgttcaaggtgatgatggtttaccaggaaaagatggcacacatggt
ttaccagggcccgctggccttccaggtgatggtatcagaggtctcccaggtgaccctggt
tttccaggaccaacgggtgttaagggctttccaggagatgctggactgccaggtgttggt
ttacctggctcaaaaggatttcatggtcttccaggggaccatggaacatatggaaagtct
ggacctccaggtcctccaggtcctccaggagatccagctcagctaggttgtgaccaagtt
cctgaagacctttctagaggagatggaagggaaccaatttggccaggtgcaggctgtgtg
agagcaccaccaggacaaccaggaaagccaggattcccaggatctacaggttcaaaaggt
gcaaaagggattccaggtgatccaggtctagatggatttcaaggcctgaaaggttttcca
ggtgaccctggtcaggaaggattaccaggtcctccaggatttcctggacccaggggagaa
agaggcccatcaggtttaactggtcaacagggggaaaagggtatttcaggaaaaccagga
gtccaagggcctgaaggaccaaagggagttgcaggtgaagttttaggagcatcagcaggc
tccatcggtgatgtcggactaccaggattacctggattaaaaggtccaccaggaaatcaa
ggagtaccaggactgcaaggagctgccggtattccaggttcaccaggatccaaaggtgag
ccaggtctccaaggccctcgtggcttgattggtctgccaggagaaccaggatcacatgga
ttcccaggaattccaggacagcaaggaccagctgggagaggtggtataactggacacatt
gggtcacctggtgccaggggagatcacggtgaacaaggttttcctggcccagtgggtatg
aaaggtctatctggtgataaaggtgaaccaggtatcccaggaatacaaggtatacctggt
aagactggtctccctggcatagatggaatgcatggccttcaaggatataaaggtgctaag
ggttcccctggcattgaaggtttcaaaggcatgacaggcaaccgaggatttcaaggacct
aaaggattcaaaggagaaataggcttttttggcatttatggtccaaaaggtgaacagggt
ataacaggctccaaaggtgaccgtggggaacaaggagaaccaggacagccaccaaaaata
gaggccaaaatgctcaaggaagttaaaggtgaaaaaggagatagtggacaaactggcttt
tcaggggatcctggctttaaaggtcttaaaggaatgccaggtatacctggtaaaccagga
ctcccaggttttcctggacagcctagtcatgtttctggtgcaaagggagccattggtagt
aaaggagtaccaggtagtccagggtatccaggacaagctggctctcctggtatcagaggc
ttccctggaagcacaggaatcagaggtgaaaagggtactccaggatttacaggccttttt
ggtgaatctggcttacccggtgaatctggtgacccaggagatattataaacttaccagga
atcccaggtcttaaaggagaggttggtacacctggatcctcaggtgtgagaggaagccca
ggagaaaaaggtcaaagaggtgatcctggtttttctgggattgagggcttgaaaggatta
caaggtcttcctggtataaaaggacaaagcggtttcccagggcttgttgggccaccagga
caacaaggagacccaggtgctcctgggcttccaggtgaaaaaggaactcagggacggcct
ggtttagcaggaccaacaggtttacctggcttacgaggaatccatggacaaagtggtttg
cctggcacaaaaggcctcccaggatcaccaggtctggatgattatgggccttcaggcttc
ccaggtggccctggtgacaaaggacaaataggagacccaagcactcttgaaggtgccaga
ggaggtcctggtcagaaaggagagagaggcaatcaaggggagcgagggccagctggttcc
ccagggcatgatggaattccaggccctcctggagtttcaaacatatcaggaatccggggt
gatgttggttctccaggcctagatggtgtgccaggctataaaggagaacagggcaggcat
ggaataccatctccaccaggaagcaaaggagaaactgggcaaataggtgtgattggagaa
gatggcccaaaaggcactaggggtgaccctggtctaacaggaaaaccagggattctaggg
agctttggagaaaaaggccagaaaggggaacaaggtgtcatgggcactgttggcacagtg
ggaattcctggtgatagaggccccactggacccaaggggaatagaggagttactggtctt
cagggacctccaggctctcctgggctgtctcccataccctctaagaggcttgctgaggtt
ggtgcaccaggcccacatgggcggagagggccccaaggaattccaggagagattgggccc
cagggtccattaggtgatttaggttttagaggtgcacctggtaaacaagggctccaggga
aaaagtggcattccagcacttccagggtttagaggtgatcaaggaccacaagggcatcga
ggtccatcaggatctgagggtataccaggccgtccaggtagccctgggttgccaggtatg
ccaggtcgtagcgttagcattgggtaccttctggtgaagcatagccaatctgatcaagag
ccaatgtgccccattggcatgaacaaactctggagcggatacagtttgctatattttgaa
ggccaagaaaaagcacataaccaggaccttgggctggctggctcatgtttgactcggttt
agtactatgccgttcctctactgtaaccctggggatgtctgttactatgcaaaccggaat
gataagtcctactggctctcaaccacagcacctctgcccatgatgcctgtggcagaagaa
gaaattagaccgtatatcagtcgctgctcggtctgcgaggccccagctgtcgcgattgct
gtccacagccaagatgtgtcaatcccacactgccccgaaggatggcgtagtttatggatc
ggatattccttcttgatgcacactgcagctggtgatgaaggtggagggcagtcactggtt
tctcctggaagctgtttggaagatttcagagctaccccttttattgaatgcaatggtgcc
cgtggaacctgccactactatgcaaacaagtacagcttctggcttactactattgaagag
caattccagagcacaccctctgcagacacgcttaaggcaggactcatccgaactcacatc
agcagatgtcaagtttgcatgaaaaatttgtaa
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integrated database retrieval system
