Crocodylus porosus (Australian saltwater crocodile): 109305483
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Entry
109305483 CDS
T07440
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo04382
Cornified envelope formation
cpoo04510
Focal adhesion
cpoo04512
ECM-receptor interaction
cpoo04518
Integrin signaling
cpoo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109305483 (COL4A2)
04518 Integrin signaling
109305483 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109305483 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
109305483 (COL4A2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
109305483 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpoo04147
]
109305483 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
cpoo00536
]
109305483 (COL4A2)
Exosome [BR:
cpoo04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
109305483 (COL4A2)
Glycosaminoglycan binding proteins [BR:
cpoo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109305483 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
109305483
NCBI-ProteinID:
XP_019384030
LinkDB
All DBs
Position
Unknown
AA seq
1730 aa
AA seq
DB search
MTMQVLLLLMLTTLLTGRVQAGGKTYTGPCAGRDCSGGCQCFPEKGSRGQPGPLGPQGFP
GPPGLIGIPGLEGPKGHKGERGQPGITGPKGDQGLRGVTGFPGADGVPGHPGQPGSRGKP
GHDGCNGTTGDPGEQGIQGPPGQFGFTGAQGPKGQKGEPYALPPEVAEQYRGEKGEPGIK
GFPGPQGEPGPVGFIGPKGRPGRPGRPGPPGPPGEKGNRGLGFYGEKGEKGEIGPKGPAG
RPSTREFTTSTDFSMDDYKVFLWQSFPKHLLINKLVSDTVVPLGEKGMQGEKGDPGRPGF
PAPQAEKGEEGIMGSPGQRGLPGISGIQGPVGEAGSRGFYGSPGYDGPKGMKGEQGERGI
QGLPTYVPYPIPRKGVRGDPGVPGFQGPRGELGEKGDPGIPGWPETLDELDDLDKRGLPG
EMGPKGYKGEPGFSAFQPGIPGFPGQPGPKGFPGPPGPKGSSFISFGLKGRTGDPGEAGS
QGFPGPRGDKGFKGETGDCKCTRSDEARKGSAGLPGPPGFEGPPGDPGRKGEPGDQGQHG
IPGFPGTKGFPGETGYPGPRGQKGDSIYITTKGFKGDPGDPGLAGVQGDDGLPGKDGTHG
LPGPAGLPGDGIRGLPGDPGFPGPTGVKGFPGDAGLPGVGLPGSKGFHGLPGDHGTYGKS
GPPGPPGPPGDPAQLGCDQVPEDLSRGDGREPIWPGAGCVRAPPGQPGKPGFPGSTGSKG
AKGIPGDPGLDGFQGLKGFPGDPGQEGLPGPPGFPGPRGERGPSGLTGQQGEKGISGKPG
VQGPEGPKGVAGEVLGASAGSIGDVGLPGLPGLKGPPGNQGVPGLQGAAGIPGSPGSKGE
PGLQGPRGLIGLPGEPGSHGFPGIPGQQGPAGRGGITGHIGSPGARGDHGEQGFPGPVGM
KGLSGDKGEPGIPGIQGIPGKTGLPGIDGMHGLQGYKGAKGSPGIEGFKGMTGNRGFQGP
KGFKGEIGFFGIYGPKGEQGITGSKGDRGEQGEPGQPPKIEAKMLKEVKGEKGDSGQTGF
SGDPGFKGLKGMPGIPGKPGLPGFPGQPSHVSGAKGAIGSKGVPGSPGYPGQAGSPGIRG
FPGSTGIRGEKGTPGFTGLFGESGLPGESGDPGDIINLPGIPGLKGEVGTPGSSGVRGSP
GEKGQRGDPGFSGIEGLKGLQGLPGIKGQSGFPGLVGPPGQQGDPGAPGLPGEKGTQGRP
GLAGPTGLPGLRGIHGQSGLPGTKGLPGSPGLDDYGPSGFPGGPGDKGQIGDPSTLEGAR
GGPGQKGERGNQGERGPAGSPGHDGIPGPPGVSNISGIRGDVGSPGLDGVPGYKGEQGRH
GIPSPPGSKGETGQIGVIGEDGPKGTRGDPGLTGKPGILGSFGEKGQKGEQGVMGTVGTV
GIPGDRGPTGPKGNRGVTGLQGPPGSPGLSPIPSKRLAEVGAPGPHGRRGPQGIPGEIGP
QGPLGDLGFRGAPGKQGLQGKSGIPALPGFRGDQGPQGHRGPSGSEGIPGRPGSPGLPGM
PGRSVSIGYLLVKHSQSDQEPMCPIGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLTRF
STMPFLYCNPGDVCYYANRNDKSYWLSTTAPLPMMPVAEEEIRPYISRCSVCEAPAVAIA
VHSQDVSIPHCPEGWRSLWIGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGA
RGTCHYYANKYSFWLTTIEEQFQSTPSADTLKAGLIRTHISRCQVCMKNL
NT seq
5193 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgcaggttctgctgctgttgatgctgactacactgttaactggaagagtccaa
gctggtggaaagacttacacaggaccatgtgcaggaagagactgtagtggaggatgtcaa
tgtttccctgaaaaaggaagccgtggccaaccaggaccacttggaccacagggattccct
ggaccaccaggattaataggtataccaggtttagaaggtcccaaaggtcataaaggtgaa
agagggcaaccaggaataactggaccaaaaggagaccagggcttaagaggagttactggc
tttcctggagcagacggtgttcctggtcatccaggccagccagggtcaagaggaaaacca
ggtcatgatggctgcaatggtacaacaggtgaccctggtgaacagggaatccagggcccc
ccgggtcaatttggtttcactggagcccaaggaccaaaagggcagaagggagaaccatat
gcattgcctcctgaagtagcagaacaatacagaggtgagaagggtgaaccaggaattaag
ggctttccagggcctcagggtgagcctggtcctgtgggctttattggtccaaaagggagg
ccaggaagaccaggacgaccggggccaccaggacctccaggagaaaaaggcaacagaggc
cttggcttttatggagaaaaaggtgaaaagggcgagataggtcccaaaggtcctgctggg
cgtccatctacaagggagtttacaacttccacagatttctcaatggatgactacaaggta
tttctttggcagtcattccctaagcatctcctcataaacaagcttgtttcagacacggta
gtacccctgggagaaaaaggaatgcaaggagaaaaaggagatcctggaagaccaggcttc
cctgcacctcaagctgaaaagggagaagaagggataatgggttctccaggacaaagggga
ttgccaggcatcagtggcattcaaggacctgttggagaagcaggttctcgaggattttat
ggctccccaggctatgatggtcctaaaggaatgaagggagagcagggcgaaagaggtatc
caaggattgcctacttacgttccttatcccattccaagaaaaggtgtcagaggtgaccca
ggagtaccaggtttccaggggcctagaggagagttgggggaaaaaggagatcctggaatt
cctggttggcctgaaacattggatgagcttgatgacttggacaaaagaggtttacctgga
gaaatgggacccaaaggttataagggagaaccaggtttttcagcttttcagccagggata
cctggctttcctggtcagcctggaccaaaaggattccctggccccccaggcccaaaaggc
agttcattcatctcatttggactgaagggacgcaccggggatccaggtgaagcaggcagc
caaggtttccctggaccacgaggagataaaggatttaaaggtgaaacaggggattgtaag
tgtaccagaagtgatgaagccagaaagggttctgctggtctacccggtccaccaggtttt
gaaggcccacctggagatcctggaaggaaaggagagcctggtgatcaaggtcaacatggc
attccaggcttccctgggacaaaaggcttccctggtgaaactggataccctggaccaaga
gggcagaaaggagattctatttatataacgactaaaggttttaaaggagatccaggagat
cctgggctggctggtgttcaaggtgatgatggtttaccaggaaaagatggcacacatggt
ttaccagggcccgctggccttccaggtgatggtatcagaggtctcccaggtgaccctggt
tttccaggaccaacgggtgttaagggctttccaggagatgctggactgccaggtgttggt
ttacctggctcaaaaggatttcatggtcttccaggggaccatggaacatatggaaagtct
ggacctccaggtcctccaggtcctccaggagatccagctcagctaggttgtgaccaagtt
cctgaagacctttctagaggagatggaagggaaccaatttggccaggtgcaggctgtgtg
agagcaccaccaggacaaccaggaaagccaggattcccaggatctacaggttcaaaaggt
gcaaaagggattccaggtgatccaggtctagatggatttcaaggcctgaaaggttttcca
ggtgaccctggtcaggaaggattaccaggtcctccaggatttcctggacccaggggagaa
agaggcccatcaggtttaactggtcaacagggggaaaagggtatttcaggaaaaccagga
gtccaagggcctgaaggaccaaagggagttgcaggtgaagttttaggagcatcagcaggc
tccatcggtgatgtcggactaccaggattacctggattaaaaggtccaccaggaaatcaa
ggagtaccaggactgcaaggagctgccggtattccaggttcaccaggatccaaaggtgag
ccaggtctccaaggccctcgtggcttgattggtctgccaggagaaccaggatcacatgga
ttcccaggaattccaggacagcaaggaccagctgggagaggtggtataactggacacatt
gggtcacctggtgccaggggagatcacggtgaacaaggttttcctggcccagtgggtatg
aaaggtctatctggtgataaaggtgaaccaggtatcccaggaatacaaggtatacctggt
aagactggtctccctggcatagatggaatgcatggccttcaaggatataaaggtgctaag
ggttcccctggcattgaaggtttcaaaggcatgacaggcaaccgaggatttcaaggacct
aaaggattcaaaggagaaataggcttttttggcatttatggtccaaaaggtgaacagggt
ataacaggctccaaaggtgaccgtggggaacaaggagaaccaggacagccaccaaaaata
gaggccaaaatgctcaaggaagttaaaggtgaaaaaggagatagtggacaaactggcttt
tcaggggatcctggctttaaaggtcttaaaggaatgccaggtatacctggtaaaccagga
ctcccaggttttcctggacagcctagtcatgtttctggtgcaaagggagccattggtagt
aaaggagtaccaggtagtccagggtatccaggacaagctggctctcctggtatcagaggc
ttccctggaagcacaggaatcagaggtgaaaagggtactccaggatttacaggccttttt
ggtgaatctggcttacccggtgaatctggtgacccaggagatattataaacttaccagga
atcccaggtcttaaaggagaggttggtacacctggatcctcaggtgtgagaggaagccca
ggagaaaaaggtcaaagaggtgatcctggtttttctgggattgagggcttgaaaggatta
caaggtcttcctggtataaaaggacaaagcggtttcccagggcttgttgggccaccagga
caacaaggagacccaggtgctcctgggcttccaggtgaaaaaggaactcagggacggcct
ggtttagcaggaccaacaggtttacctggcttacgaggaatccatggacaaagtggtttg
cctggcacaaaaggcctcccaggatcaccaggtctggatgattatgggccttcaggcttc
ccaggtggccctggtgacaaaggacaaataggagacccaagcactcttgaaggtgccaga
ggaggtcctggtcagaaaggagagagaggcaatcaaggggagcgagggccagctggttcc
ccagggcatgatggaattccaggccctcctggagtttcaaacatatcaggaatccggggt
gatgttggttctccaggcctagatggtgtgccaggctataaaggagaacagggcaggcat
ggaataccatctccaccaggaagcaaaggagaaactgggcaaataggtgtgattggagaa
gatggcccaaaaggcactaggggtgaccctggtctaacaggaaaaccagggattctaggg
agctttggagaaaaaggccagaaaggggaacaaggtgtcatgggcactgttggcacagtg
ggaattcctggtgatagaggccccactggacccaaggggaatagaggagttactggtctt
cagggacctccaggctctcctgggctgtctcccataccctctaagaggcttgctgaggtt
ggtgcaccaggcccacatgggcggagagggccccaaggaattccaggagagattgggccc
cagggtccattaggtgatttaggttttagaggtgcacctggtaaacaagggctccaggga
aaaagtggcattccagcacttccagggtttagaggtgatcaaggaccacaagggcatcga
ggtccatcaggatctgagggtataccaggccgtccaggtagccctgggttgccaggtatg
ccaggtcgtagcgttagcattgggtaccttctggtgaagcatagccaatctgatcaagag
ccaatgtgccccattggcatgaacaaactctggagcggatacagtttgctatattttgaa
ggccaagaaaaagcacataaccaggaccttgggctggctggctcatgtttgactcggttt
agtactatgccgttcctctactgtaaccctggggatgtctgttactatgcaaaccggaat
gataagtcctactggctctcaaccacagcacctctgcccatgatgcctgtggcagaagaa
gaaattagaccgtatatcagtcgctgctcggtctgcgaggccccagctgtcgcgattgct
gtccacagccaagatgtgtcaatcccacactgccccgaaggatggcgtagtttatggatc
ggatattccttcttgatgcacactgcagctggtgatgaaggtggagggcagtcactggtt
tctcctggaagctgtttggaagatttcagagctaccccttttattgaatgcaatggtgcc
cgtggaacctgccactactatgcaaacaagtacagcttctggcttactactattgaagag
caattccagagcacaccctctgcagacacgcttaaggcaggactcatccgaactcacatc
agcagatgtcaagtttgcatgaaaaatttgtaa
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integrated database retrieval system
