Crocodylus porosus (Australian saltwater crocodile): 109305576
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Entry
109305576 CDS
T07440
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109305576 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpoo03019
]
109305576 (NUP98)
03036 Chromosome and associated proteins [BR:
cpoo03036
]
109305576 (NUP98)
Messenger RNA biogenesis [BR:
cpoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109305576 (NUP98)
Chromosome and associated proteins [BR:
cpoo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
109305576 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
109305576
NCBI-ProteinID:
XP_019384108
Ensembl:
ENSCPRG00005017126
LinkDB
All DBs
Position
Unknown
AA seq
1491 aa
AA seq
DB search
MFNKSFGTPFGGTAGFGTTSTFGQNAGFGTTSGGAFGASAFGSNNNTGGLFGNTQTKPGG
LFGSTAFNQPATSSTSTGFGFGTSTGFSNSLFGTTSTGGGLFSSQNNAFAQNKPAGFGNF
GTSTSSGGLFGTTNTTSNPFRSTSGSLFGPTSFTAAPTGTTIKFNPPTGTDTMVKSGVST
NISTKHQCITAMKEYESKSLEELRLEDYQANRKGPSNPVGAGATASLFGSPAATSSAATG
LFGSTTTNTGFSYRQNKTGFGTNLICTNSSVFLGFGANTAGTSLFGNKPTTGSLGTGLGT
GFGTALGAGQTSLFGNTQPKLGGTLGTGAFGAPGFNTSTATLGFGAPQPAVALTDSSASA
AQQAVLQQHLNSLTYSPFGDSPLFRNPMSDPKKKEERLTPTNPAAQKALTTPTHYKLTPR
PATRVRPKALQTSGSAKSHLFDGLDDDEPSLSNGAFMPKKSIKKLVLKNLSSSNLFSPIS
HEAEDLASPSEYPENGERFNFLSRSIDENHRQDGEPEEDDDHHKVTRFYTNPIAKPIPQT
PENAVHKHQNSVDDTIVALNMRVALRNGLEGSSEDASYHEESLQDDREDETENVHHLHPA
ACCSPLLQSPEVEQLGRVVELDSDMTDITQEPAQDSMLEDAMTEDQEPVPASTHIASSLG
INPHVLQIMKASLLADEEDLDLILDRHFGKQSTKMDTSQEICSPRLPISALQGQKKRSSV
GGLLQSKFASVSLLPSASLQDSHGPRTSSFGKPPPPAPWSVFSPLASVFTVPAAAPEPQV
KTVGARRQQGLVPLEKSITYGKGKLLIDMALFMGRSFRVGWGPSWTLINCGDQVSGSSEA
NHLRNTSMEYGFLPAPVPPKSLSESSFKVHIEKLNLEQKKTEGDKQLYLLPLEIKLKHST
VHLDDYCPFIAPNPGVAAIHDYADWVREVSGDPAEIENVVKHWGLTWTLCEAIWGNLKEL
EASLEEPSEYVLTLERRKAFSRWLSQTAAGRIEEEVSLSRHDNHIEAVFSYLTGKRISKA
CRLAQESGDYRLALLLSQLAGSQEVRELLTMQLVDWHRLQADCFIQEERLRIFALLAGKP
VWQLSERKSINVCSQLDWKRCIAIHLWYLLPPTASISKALGMYEAAFQNTLESEKYACCP
LPPYLEDSGCVLEEDDSTNRPLRDVCFHLLKLYSDRHYDLHQLLDPRSITSDPLDYRLSW
HLWEVLRALNYTHLSEQCQGVLNASYAAQLESKGLWEWAIFVLLHTSNAHTREKAVRELL
TRHCVLSETSESWTKEAFLTQKLCVPPEWIHEAKAIRARMEGDKHKEALYLFRAGHWNQC
HKLIIRHLASDAIINENYKYLKGFLEDLSPPERSTLIQDWDTAGLVYLDYIRVIEMLDRI
QQLDCSTYELERLHTKVTSLCNRIEQIQCHSAKDRLAQSDMAKRIANLLRVVLSLQHSPE
PASDSTPDLQRVPLRLLAPHIGRLPMPEDYALEELRSLTQSYLRELMVVTQ
NT seq
4476 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaatcatttgggactccatttggaggcactgctggctttgggactacttca
acctttggacaaaatgccggctttggtactaccagtggaggagcatttggagcatcagcc
tttgggtcaaacaataatacaggaggcctctttgggaacacgcagaccaagccaggagga
ttgtttggttcgactgcatttaatcaaccagccacctcctccacaagcactggctttggg
tttgggacctcaacgggattttcaaacagcttatttgggacaaccagcactggtggaggt
ctcttttcatcccagaataatgcctttgcacagaataaaccagctgggtttggaaacttt
gggacaagtaccagcagtggaggtctctttggaaccactaacactacctccaatcctttt
aggagtacatcgggctctctctttggcccaactagctttaccgctgctccaactggcaca
actattaaatttaatccaccaactggcacagatactatggtaaaatctggagttagtact
aacatcagcaccaagcaccaatgtattactgctatgaaggagtatgaaagcaaatcctta
gaggaactccgtttggaagattaccaagcaaacaggaaagggccatcaaacccagtggga
gcaggagcaactgcaagtttatttggatcccctgcagccacatcaagtgctgctactgga
ctgttcggctccaccaccaccaacacaggcttttcctacagacagaataaaactggcttt
ggaaccaacttgatttgtactaattcttctgtattcctaggttttggtgcaaacactgcc
ggcactagtctgtttgggaataagcctacaactgggtctctgggaactggacttggaact
ggatttgggacagctcttggtgcaggccagacttcattatttgggaacacccagcctaaa
ctaggtggaaccctgggaactggagcatttggagcaccgggattcaacacgtcaacggct
actctgggctttggagctcctcaacctgctgtggcactgaccgactccagtgcttcagcg
gcccagcaagcagtccttcagcagcatcttaacagcttgacctattcaccttttggagat
tctcctctcttcagaaaccccatgtcagacccgaaaaagaaagaagagagattgacacca
accaacccagctgcacagaaggctttgactacacccactcactacaaattgacccctcgt
cctgcaactcgagtgagacccaaagctctgcagacttcgggctcagccaaatctcacctc
ttcgatggtctggatgatgatgagccctccctgtccaatggtgctttcatgcccaagaag
agcatcaagaagctggttttgaaaaacctcagcagcagcaacctgttttctcccatcagt
catgaagctgaagacctggcctctccatcagagtatccagagaacggagagcggttcaac
tttctgtcccgctctattgatgagaaccacagacaggatggtgagccagaggaagacgac
gaccatcacaaagtgactaggttttacacaaaccccattgccaaacccatcccacagacc
ccagagaatgctgtgcacaaacaccagaacagtgtcgatgacaccattgtggctctgaat
atgcgggttgccttgcgaaatggtctggaaggcagcagtgaagatgcctcatatcatgaa
gagtctttgcaggatgaccgtgaagatgagactgagaacgtgcatcatctgcacccagca
gcttgctgctcccctcttctgcagagcccagaagtggaacagctggggagggtggttgaa
ctggatagtgatatgacagacatcacccaggaacctgcccaagactccatgctggaagat
gctatgacagaagatcaggaacctgtgcctgcatcaacacacattgcatcctcactgggc
ataaacccccacgtgttacagatcatgaaagcttctttgctggctgatgaagaggactta
gacttgatcctagatcgtcattttggcaaacagtctacgaaaatggatacttctcaagaa
atctgctcccccagacttccaatttcagcattgcaaggacagaagaaacgctcctcagtt
ggtggattgctgcaatcaaagtttgccagcgtctctctccttccaagtgcttctttacaa
gattctcatggaccaagaacttcctcttttggcaaaccccctcctccagcaccttggtct
gtgttttccccacttgcctctgtgttcacagtccctgctgcagccccagagccacaggtg
aagacagtgggtgcccgcaggcagcagggtctggtacctctggagaaatccattacctat
ggaaaaggaaaactcttgatagacatggcactcttcatgggacgctcgtttcgggttggc
tggggacccagttggactcttatcaattgtggagaccaagtgagtgggtccagtgaagca
aaccaccttcgcaacacatctatggaatatgggttcttgccagctcctgtccctcccaaa
tcgctttcagaatcttccttcaaggttcacatagagaagcttaacttggaacaaaagaag
acagagggtgacaagcaattatacctcctccctctggagataaaactcaaacacagcact
gtccatttggatgattattgtcctttcatagcccccaacccaggagtggctgccattcac
gactatgctgactgggttagagaagtctccggagaccctgcagaaattgaaaacgtggta
aagcattggggtctgacgtggactctgtgcgaggcaatctggggcaacctgaaagagttg
gaagccagtttggaggagcccagcgagtacgtcttgaccctggagcgcaggaaagccttc
tcgcgttggctatcgcagaccgcagccgggcgaatcgaggaggaggtctcgctctcgcgg
cacgataaccacattgaggctgtgtttagctacctgactgggaagcggatcagcaaggct
tgtaggttggcacaagagtcaggtgattacaggcttgctctactcctctcccagctggcg
ggcagccaggaggttcgggagctcctcaccatgcagttagtggactggcacagactgcag
gcagactgcttcatccaggaagagaggttacgcatctttgctctgcttgctggaaagccg
gtgtggcagttatctgagaggaaaagcattaatgtatgctcacagctggactggaagcgt
tgtatagctatccatctctggtacctgcttccgcctacagcttccatttccaaggcactt
ggcatgtatgaggcagcgttccagaacacgctggagtccgagaagtatgcctgctgtccc
cttcctccctatctggaggactcgggctgcgtacttgaggaagatgacagcacaaacagg
cccctgcgagatgtctgctttcatctgttaaagctctacagtgacaggcattatgatctc
catcagctgctggaccccaggagtataacatctgaccccttggactaccgtctcagttgg
cacctgtgggaagtgctcagagccctgaattacacacacttatcggaacagtgtcaggga
gtgctgaatgccagctacgctgcccagctggaaagcaaggggctctgggaatgggccatc
tttgtgctgttgcatacctctaatgcacacactcgtgaaaaggcagtgcgtgagctctta
acccgccactgcgtgctgtccgagacctcagaatcctggacaaaagaagccttcctgaca
caaaagctctgcgttcccccagagtggattcacgaggcaaaggccattcgggcaaggatg
gagggagataagcataaagaggctctctacttattcagagctgggcactggaaccagtgc
cacaagctgatcatcaggcacttagcctcagatgccattatcaatgagaactacaagtac
ctgaaaggcttcctggaagatttgtcacccccagaacgcagtacgctcatccaggactgg
gacacggcagggctggtttatttggactatatccgggtcattgagatgctcgacaggatt
cagcagctggattgttccacatacgagttggagagattacataccaaagtgacgtcgcta
tgcaataggatagaacagatacagtgccacagcgccaaggaccgattggctcagtcagac
atggccaagcgcatcgctaacctgctgcgggtggtgctgagcctacagcactctccagag
cctgcatccgactccacgcccgacttgcagcgagtccccctccgcctgcttgcgccccac
attggccggctccccatgccggaggactatgccctggaggaactgcgcagcctcacgcag
tcctacctacgggaactgatggtggtgacgcagtga
DBGET
integrated database retrieval system
