Crocodylus porosus (Australian saltwater crocodile): 109305910
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Entry
109305910 CDS
T07440
Symbol
DDX3X
Name
(RefSeq) ATP-dependent RNA helicase DDX3X isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpoo03019
]
109305910 (DDX3X)
03041 Spliceosome [BR:
cpoo03041
]
109305910 (DDX3X)
03036 Chromosome and associated proteins [BR:
cpoo03036
]
109305910 (DDX3X)
Enzymes [BR:
cpoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109305910 (DDX3X)
Messenger RNA biogenesis [BR:
cpoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
109305910 (DDX3X)
mRNA cycle factors
Common to processing body (P body) and stress granule
109305910 (DDX3X)
Spliceosome [BR:
cpoo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
109305910 (DDX3X)
Chromosome and associated proteins [BR:
cpoo03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
109305910 (DDX3X)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
109305910
NCBI-ProteinID:
XP_019384631
Ensembl:
ENSCPRG00005000367
UniProt:
A0A7M4DVG8
LinkDB
All DBs
Position
Unknown
AA seq
723 aa
AA seq
DB search
MSHVAVENALSLDQQFAGLDLNSSDSQSGGGTASKGRYIPPHLRNREASKQGSWSPGASG
FCSSAADTSPSMQDSPSWDSGRGGNGYMNGYARDSRMNGYDRDRSGFGSRGGSGRDDRGY
DSGWSSSRDKDAYSSFGGRSDRGAKSSFFDRGNESRGGRYEDRGRGGDYDRSGFGGRSDR
GFGGGSRWSDKSDEDDWSKPLAPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPHI
ESFSDVDMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPIL
SQIYTDGPGDALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCV
VYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEP
QIRRIVEQDTMPPKGVRQTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKV
VWVEEMDKRSFLLDLLNATGKDSLTLVFVETKKGADALEDFLYHEGYACTSIHGDRSQRD
REEALHQFRSGRSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLG
LATSFFNERNINITKDLLDLLVEAKQEVPSWLENMAYEQLHKGGGSRGRSKSSRFSGGFG
ARDYRTSSGSSSSSFSSSRPPSSRSSGGSRGFGGGGGGSYGGFYNSDGYGGNYNSGGVDW
WGN
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggcggtggaaaatgctctcagtctagaccagcagtttgcgggtctagac
ttgaattcctcagactctcagagtggaggaggcacagcaagcaaaggtcgctacattcct
cctcacttgcggaacagagaagcttcaaaacagggaagctggagcccaggggcctctggc
ttctgttcatctgctgctgacacttcaccttccatgcaagattcccccagctgggactct
ggtcgtggaggtaatggctatatgaatggctatgcccgagacagccggatgaatggctat
gaccgtgatcgcagtgggtttggatctagaggaggatctggacgtgatgacagaggatat
gacagcgggtggagttccagtagagacaaggatgcatacagcagctttggtggtcgaagt
gatcgtggagcaaaatcgagcttctttgaccgtggaaatgagtcaagaggaggaagatat
gaggatcgtggaagaggtggtgactatgataggagcgggtttggtggcagatctgaccgt
ggatttggaggtgggtcacgctggtctgataaatctgatgaagatgactggtcaaaaccg
cttgcaccaagtgaacgtctagaacaagaactcttctccggaggcaatactggcattaac
tttgagaaatatgatgacattcccgttgaagcaacaggcaacaactgtcctccacatatt
gagagtttcagtgatgttgacatgggagagatcatcatgggaaacattgagcttactcga
tacacccgtcccactccagtccagaaacatgctatacctattatcaaagaaaagagagat
ttgatggcatgtgcccagacagggtctgggaaaacagctgcatttcttctgccaatattg
agtcagatctatacagatggcccaggtgatgctctgagggctatgaaggaaaatggaagg
tatggacgccgcaagcagtacccaatctcactagttttggcaccaacaagagaactggct
gtgcagatatatgaagaagccagaaagttttcctaccgttccagagttcgtccttgtgtt
gtctatggtggtgctgacattgggcaacagatacgtgacttggaacgtggatgtcacttg
cttgttgcaactccagggcgcctggttgatatgatggaaaggggaaagattggattggat
ttctgcaagtatctagtattggatgaagctgatcgtatgcttgatatggggtttgaacct
caaattcgtcgtattgttgaacaagatacaatgccaccaaagggtgttcggcagaccatg
atgtttagtgccacttttcccaaggaaatccagatgcttgctcgtgacttcctggatgag
tacatctttctggctgttggcagagtgggctcaacatctgagaacatcacgcagaaagta
gtgtgggtggaagagatggataaacggtcatttttgcttgacctcctaaatgctacaggc
aaagattcactgactctggtgtttgtggagactaaaaagggagctgatgctttggaagac
ttcttgtatcatgaaggatatgcttgtacaagtatccatggagaccgctctcagagggac
agagaggaagcgctgcatcagttccgctcaggcagaagcccaattctggttgccacagct
gtagcagcaagaggattggacatctcaaatgtaaagcatgtcataaactttgacttgcca
agtgacattgaagagtatgtacatcgcattggtcgtacaggccgtgtgggaaaccttggt
cttgccacctcattcttcaacgagaggaatataaacatcaccaaggacttgctagatctc
cttgttgaagctaaacaagaagtgccatcttggctggaaaacatggcttatgaacagctt
cacaagggtggtggcagtcgtggacgttcgaagagtagcaggttcagtggaggatttggt
gccagagactatcgaacaagcagcggttccagcagtagtagcttcagcagtagtcgacca
cccagcagtcgcagtagtggaggcagcagaggatttggaggtggtggtggtggtagctac
ggaggcttctacaacagtgatggatatggaggaaactataactccgggggggttgactgg
tggggcaattga
DBGET
integrated database retrieval system
